Contig 000131:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024P01Sequence481000131 (2)ref|XP_009757611.1|1e-63PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic [Nicotiana s684002661 (2)ref|XP_009757611.1|3e-93PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic [Nicotiana s
JMFF041G14Sequence640000131 (2)ref|XP_009757611.1|6e-111PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic [Nicotiana s634002661 (2)ref|XP_009757611.1|9e-69PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic [Nicotiana s

Alignment

This contig is upended


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JMFF041G14+                          TTTCACTGTAGTTGGACACCCCAACAGCTTTCACGAGGCCCTGTT
                      ____________________________________________________________
consensus                            TTTCACTGTAGTTGGACACCCCAACAGCTTTCACGAGGCCCTGTT
 
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JMFF041G14+           CCACCGCATCTCCTAAACCATCAATATAACCTTCATTTCCCCATATCCCTGGCCAGTGGA
                      ____________________________________________________________
consensus             CCACCGCATCTCCTAAACCATCAATATAACCTTCATTTCCCCATATCCCTGGCCAGTGGA
 
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JMFF041G14+           GCTGATAAAGTTCTACCGAAGAAAGTTCAAGGCGGGACAGGGAATCCTTGAGGGCTGCAA
JMFF024P01+                                                                      A
                      ____________________________________________________________
consensus             GCTGATAAAGTTCTACCGAAGAAAGTTCAAGGCGGGACAGGGAATCCTTGAGGGCTGCAA
 
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JMFF041G14+           GGACGCTTTCCCGGCCAAGCCTCCATGGCAGTGCTGCAAACTTGGTTGCAACAGCAACCT
JMFF024P01+           GGACGCTTTCCCGGCCAAGCCTCCATGGCAGTGCTGCAAACTTGGTTGCAACAGCAACCT
                      ____________________________________________________________
consensus             GGACGCTTTCCCGGCCAAGCCTCCATGGCAGTGCTGCAAACTTGGTTGCAACAGCAACCT
 
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JMFF041G14+           CCACA-TCTGGAGTCCTCTCTTTTCTTTCCTTAATGAATCTCCCTAGTAGAGTTTCAGAA
JMFF024P01+           CCACATTCTGGAGTCCTCTCTTTTCTTTCCTTAATGAATCTCCCTAGTAGAGTTTCAGAA
                      ____________________________________________________________
consensus             CCACATTCTGGAGTCCTCTCTTTTCTTTCCTTAATGAATCTCCCTAGTAGAGTTTCAGAA
 
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JMFF041G14+           TTTATTGCCCCAAATGAGAACCTCGATCCATAAACCTCAGCAGTATCAATGAATGTTATT
JMFF024P01+           TTTATTGCCCCAAATGAGAACCTCGATCCATAAACCTCAGCAGTATCAATGAATGTTATT
                      ____________________________________________________________
consensus             TTTATTGCCCCAAATGAGAACCTCGATCCATAAACCTCAGCAGTATCAATGAATGTTATT
 
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JMFF041G14+           CCACAATCAATGCTAGCCTCAAAAGCACCTTTTGCAGCCTTCATTTTTCTATCATCCCAT
JMFF024P01+           CCACAATCAATGCTAGCCTCAAAAGCACCTTTTGCAGCCTTCATTTTTCTATCATCCCAT
                      ____________________________________________________________
consensus             CCACAATCAATGCTAGCCTCAAAAGCACCTTTTGCAGCCTTCATTTTTCTATCATCCCAT
 
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JMFF041G14+           TCAAAGTTGTTCCAGTAACTGGTGTCACCCCAAGACCAAGCCCCAATCCCAAGCTTCGTG
JMFF024P01+           TCAAAGTTGTTCCAGTAACTGGTGTCACCCCAAGACCAAGCCCCAATCCCAAGCTTCGTG
                      ____________________________________________________________
consensus             TCAAAGTTGTTCCAGTAACTGGTGTCACCCCAAGACCAAGCCCCAATCCCAAGCTTCGTG
 
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JMFF041G14+           ACCTTCAACTCAGACCCACCAAGCTTCGCCTTCTCTTCTTCCCCAATTCTCACAGCAACG
JMFF024P01+           ACCTTCAACTCAGACCCACCAAGCTTCGCCTTCTCTTCTTCCCCAATTCTCACAGCAACG
                      ____________________________________________________________
consensus             ACCTTCAACTCAGACCCACCAAGCTTCGCCTTCTCTTCTTCCCCAATTCTCACAGCAACG
 
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JMFF041G14+           CTGCTTTCCGAAGCCATGGCTCTCACCGGAGCCACCTGGGATTTCCTCAGGCTTAATCCG
JMFF024P01+           CTGCTTTCCGAAGCCATGGCTCTCACCGGAGCCACCTGGGATTTCCTCAGGCTTAATCCG
                      ____________________________________________________________
consensus             CTGCTTTCCGAAGCCATGGCTCTCACCGGAGCCACCTGGGATTTCCTCAGGCTTAATCCG
 
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JMFF041G14+           GAGAAACACGCGCTACTGAAATATAGAGCCATTTCCACTCTAGTGTCTAGAAGAGC    
JMFF024P01+           GAGAAACACGCGCTACTGAAATATAGAGCCATTTCCACTCTAGTGTCTAGAAGAGCAGAC
                      ____________________________________________________________
consensus             GAGAAACACGCGCTACTGAAATATAGAGCCATTTCCACTCTAGTGTCTAGAAGAGCAGAC