Contig 000129:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013P20Sequence551000129 (3)ref|XP_009763272.1|94.0PREDICTED: uncharacterized protein LOC104215218 [Nicotiana sylvestris]623001169 (4)ref|XP_010036888.1|6e-05PREDICTED: uncharacterized protein LOC104425788 isoform X1 [Eucalyptus grandis]
JMFF024L05Sequence504000129 (3)ref|XP_009763272.1|94.4PREDICTED: uncharacterized protein LOC104215218 [Nicotiana sylvestris]663001169 (4)ref|XP_010036888.1|8e-05PREDICTED: uncharacterized protein LOC104425788 isoform X1 [Eucalyptus grandis]
JMFN013H22Sequence512000129 (3)ref|XP_009763272.1|95.5PREDICTED: uncharacterized protein LOC104215218 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN013H22+                                                                     GG
                      ____________________________________________________________
consensus                                                                       GG
 
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JMFN013H22+           GGCAACGGGGGTGGTGGTGGGGATAGCGGGGGTGGCGCTATGGATTCTAGTGTCGGGTAG
JMFF013P20+                                                                     AG
                      ____________________________________________________________
consensus             GGCAACGGGGGTGGTGGTGGGGATAGCGGGGGTGGCGCTATGGATTCTAGTGTCGGGTAG
 
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JMFN013H22+           AATGGATCAAAAAATTATTGGCCAAATTGGGCATCTTGAATTAGGGGATTTGAAACCCTG
JMFF013P20+           AATGGATCAAAAAATTCTTGGCCAAATTGGGCATCTTGAATTAGGGGATTTGAAGCCCTG
JMFF024L05+                                             CTTGAATTAGGGGATTTGAAGCCCTG
                      ____________________________________________________________
consensus             AATGGATCAAAAAATTCTTGGCCAAATTGGGCATCTTGAATTAGGGGATTTGAAGCCCTG
 
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JMFN013H22+           CTTGGTGGTGACCCACAG-AAAAATGGAGGTGATGAATCCATCTGCAAATTGGATATGCC
JMFF013P20+           CTTGGTGGTGACCCACAGAAAAAATGGAGGTGATGAATCCATCTGGAAATTGGATCTGCC
JMFF024L05+           CTTGGTGGTGACCCACAGAAAAAATGGAGGTGATGAATCCATCTGGAAATTGGATCTGCC
                      ____________________________________________________________
consensus             CTTGGTGGTGACCCACAGAAAAAATGGAGGTGATGAATCCATCTGGAAATTGGATCTGCC
 
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JMFN013H22+           CTGTCCATAATCCCCCTTGGTAAGAATGATGTCCAGAAGTTCAGTCCCAGCTTCTGAATC
JMFF013P20+           CTCTCCATAATCCCCCTTGGTAAGGATGATGTCCAGAAGTTCAGTCCCAGCTTCCGAATC
JMFF024L05+           CTCTCCATAATCCCCCTTGGTAAGGATGATGTCCAGAAGTTCAGTCCCAGCTTCCGAATC
                      ____________________________________________________________
consensus             CTCTCCATAATCCCCCTTGGTAAGGATGATGTCCAGAAGTTCAGTCCCAGCTTCCGAATC
 
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JMFN013H22+           ACAAGCCTCCATTTGTTGACTAAACTGAAGAAAACAGTAAGGTTTGATGGATCCAATAGC
JMFF013P20+           ACAAGCCTCCATTTGTTGACTAAACTGAAGAAAACAGGAAGGTCTGATGGATCCGATAGC
JMFF024L05+           ACAAGCCTCCATTTGTTGACTAAACTGAAGAAAACAGGAAGGTCTGATGGATCCGATAGC
                      ____________________________________________________________
consensus             ACAAGCCTCCATTTGTTGACTAAACTGAAGAAAACAGGAAGGTCTGATGGATCCGATAGC
 
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JMFN013H22+           GTCAAAAGCGGAGGGGGAATTGAAGAACCCGCAAACTCTACGGGGCTTGGGACAAACGGC
JMFF013P20+           GTCAAAAGCGGAGGGCGAATTGAAGAACCCACCGACTCTACGGGGCTTGGGACAAACGAC
JMFF024L05+           GTCAAAAGCGGAGGGCGAATTGAAGAACCCACCGACTCTACGGGGCTTGGGACAAACGAC
                      ____________________________________________________________
consensus             GTCAAAAGCGGAGGGCGAATTGAAGAACCCACCGACTCTACGGGGCTTGGGACAAACGAC
 
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JMFN013H22+           GCCGTTTGAAAGAGCAGAGTGTACACCACCACGAAGCCCTCATCATCATATTACTTCTTC
JMFF013P20+           GCCGTTTGAAAGAGCAGAGTCTACACCACCA-GAAGCCCTCATCATCATCTT-CTTCTTC
JMFF024L05+           GCCGTTTGAAAGAGCAGAGTCTACACCACCA-GAAGCCCTCATCATCATCTT-CTTCTTC
                      ____________________________________________________________
consensus             GCCGTTTGAAAGAGCAGAGTCTACACCACCA-GAAGCCCTCATCATCATCTT-CTTCTTC
 
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JMFN013H22+           AACTTCTTTTCCTTTCCTCACCTCC-ATTTTTTGTCCTTTCTCCCTCAACCTATGCCTTC
JMFF013P20+           AACTTCTTTTCCTTTCCTCACCTCCTTTTTTTTCTCCTTTCTCCCTCAACCTATGCCTTC
JMFF024L05+           AACTTCTTTTCCTTTCCTCACCTCCTTTTTTTTCTCCTTTCTCCCTCAACCTATGCCTTC
                      ____________________________________________________________
consensus             AACTTCTTTTCCTTTCCTCACCTCCTTTTTTTTCTCCTTTCTCCCTCAACCTATGCCTTC
 
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JMFN013H22+           ACAGATCCAAGACCTG                                            
JMFF013P20+           ACAGATCCAAGACCTGAGGGAGGGGGAGAGAGAGAAAGAGATGGGTCGGAAGGCGGGGAG
JMFF024L05+           ACAGATCCAAGACCTGAGGGAGGGGGAGAGAGAGAAAGAGATGGGTCGGAAGGCGGGGAG
                      ____________________________________________________________
consensus             ACAGATCCAAGACCTGAGGGAGGGGGAGAGAGAGAAAGAGATGGGTCGGAAGGCGGGGAG
 
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JMFF013P20+           GGGGCGTGTGGGGGAGAGAGAAAGTCGGAAGCAGAGAGATTTTTTTGGGTGGCGAAGAAG
JMFF024L05+           GGGGCGTGTGGGGGAGAGAGAAAGTCGGAAGCAGAGAGATTTTTTTGGGTGGCGAAGAAG
                      ____________________________________________________________
consensus             GGGGCGTGTGGGGGAGAGAGAAAGTCGGAAGCAGAGAGATTTTTTTGGGTGGCGAAGAAG