| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009P01 | Sequence | 583 | 000127 (5) | ref|XP_011069980.1| | 156 | PREDICTED: uncharacterized protein LOC105155744 [Sesamum indicum] | 711 | 009817 (5) | ref|XP_009788748.1| | 3e-47 | PREDICTED: probable vacuolar amino acid transporter YPQ3 [Nicotiana sylvestris] |
| JMFF020G17 | Sequence | 551 | 000127 (5) | ref|XP_011010093.1| | 142 | PREDICTED: uncharacterized protein LOC105115030 [Populus euphratica] ref|XP_0110 | 750 | 009817 (5) | ref|XP_009788748.1| | 3e-49 | PREDICTED: probable vacuolar amino acid transporter YPQ3 [Nicotiana sylvestris] |
| JMFF023I02 | Sequence | 432 | 000127 (5) | ref|XP_011010093.1| | 87.0 | PREDICTED: uncharacterized protein LOC105115030 [Populus euphratica] ref|XP_0110 | 714 | 009817 (5) | ref|XP_009788748.1| | 1e-47 | PREDICTED: probable vacuolar amino acid transporter YPQ3 [Nicotiana sylvestris] |
| JMFF043H20 | Sequence | 605 | 000127 (5) | ref|XP_002322574.2| | 4e-40 | hypothetical protein POPTR_0016s02400g [Populus trichocarpa] gb|EEF04335.2| hypo | 617 | 009817 (5) | ref|XP_009788748.1| | 1e-38 | PREDICTED: probable vacuolar amino acid transporter YPQ3 [Nicotiana sylvestris] |
| JMFF046L23 | Sequence | 536 | 000127 (5) | ref|XP_011010093.1| | 132 | PREDICTED: uncharacterized protein LOC105115030 [Populus euphratica] ref|XP_0110 | 109 | 009817 (5) | |||
This contig is upended
. : . : . : . : . : . :
JMFF009P01+ CCATTATGCTCTGTT
JMFF043H20+ CTGTT
____________________________________________________________
consensus CCATTATGCTCTGTT
. : . : . : . : . : . :
JMFF009P01+ CCCTTTTCATATGCCCCATCCTCACTAACCTCATGCCACCTTCTATTGGACTTCAGCCTT
JMFF020G17+ ACTTCAGCCTG
JMFF043H20+ CCCTTNTCATATGCCCCATCCTCACTAACCTCATGCCACCTTCTATTGGACTTCAGCCTT
____________________________________________________________
consensus CCCTTTTCATATGCCCCATCCTCACTAACCTCATGCCACCTTCTATTGGACTTCAGCCTT
. : . : . : . : . : . :
JMFF009P01+ GGATAGATATGACTATAGTATAATGCTTGCCCAGCAAGACCGAAAGTAGTCAATGTAAAG
JMFF020G17+ GGATAGATATGACTATAGTATAATGCTTGCCCAGCAAGACCGAAAGTAGTCAATGTAAAG
JMFF046L23+ AGATATGACTATAGTATAATGCTTGCCCAGCAAGACCGAAAGTAGTCAATGTAAAG
JMFF043H20+ GGATAGATATGACTATAGTATAATGCTTGCCCAGCAAGACCGAAAGTAGTCAATGTAAAG
____________________________________________________________
consensus GGATAGATATGACTATAGTATAATGCTTGCCCAGCAAGACCGAAAGTAGTCAATGTAAAG
. : . : . : . : . : . :
JMFF009P01+ AACACTGCCATGTAGGTTTGCGTTGGAAGAGTAGCTGGTTCTAGAAGGCAGCCAAAGATG
JMFF020G17+ AACACTGCCATGTAGGTTTGCGTTGGAAGAGTAGCTGGTTCTAGAAGGCAGCCAAAGATG
JMFF046L23+ AACACTGCCATGTAGGTTGNCGTTGGAAGAGTAGCTGGTTCTAGAAGGCAGCCAAAGATG
JMFF043H20+ AACACTGCCATGTAGGTTTGCGTTGGAAGAGTAGCTGGTTCTAGAAGGCAGCCAAAGATG
JMFF023I02+ CAGCCAAAGATG
____________________________________________________________
consensus AACACTGCCATGTAGGTTTGCGTTGGAAGAGTAGCTGGTTCTAGAAGGCAGCCAAAGATG
. : . : . : . : . : . :
JMFF009P01+ TTGCATAGATCCCCAATAATCCACGTTAACAGGAACCAACAGGAGAGCCCCTCCGTGGAT
JMFF020G17+ TTGCATAGATCCCCAATAATCCACGTTAACAGGAACCAACAGGAGAGCCCCTCCGTGGAT
JMFF046L23+ TTGCATAGATCCCCAATAATCCACGTTAACAGGAACCAACAGGAGAGCCCCTCCGTGGAT
JMFF043H20+ TTGCATAGATCCCCAATAATCCACGTTAACAGGAACCAACAGGAGAGCCCCTCCGTGGAT
JMFF023I02+ TTGCATAGATCCCCAATAATCCACGTTAACAGGAACCAACAGGAGAGCCCCTCCGTGGAT
____________________________________________________________
consensus TTGCATAGATCCCCAATAATCCACGTTAACAGGAACCAACAGGAGAGCCCCTCCGTGGAT
. : . : . : . : . : . :
JMFF009P01+ TTCTCCCTGAAGTTAGTCATAATTTGGGGAACCTCAGCCACCGCCCAGCTCAGCACACTC
JMFF020G17+ TTCTCCCTGAAGTTAGTCATAATTTGGGGAACCTCAGCCACCGCCCAGCTCAGCACACTC
JMFF046L23+ TTCTCCCTGAAGTTAGTCATAATTTGGGGAACCTCAGCCACCGCCCAGCTCAGCACACTC
JMFF043H20+ TTCTCCCTGAAGTTAGTCATAATTTGGGGAACCTCAGCCACCGCCCAGCTCAGCACACTC
JMFF023I02+ TTCTCCCTGAAGTTAGTCATAATTTGGGGAACCTCAGCCACCGCCCAGCTCCNCACACTC
____________________________________________________________
consensus TTCTCCCTGAAGTTAGTCATAATTTGGGGAACCTCAGCCACCGCCCAGCTCAGCACACTC
. : . : . : . : . : . :
JMFF009P01+ AACGCCCCCAGCACCAGCGAAACTTCATCCTTACTGCTGCACAGGCAGTAGTCCATGTAC
JMFF020G17+ AACGCCCCCAGCACCAGCGAAACTTCATCCTTACTGCTGCACAGGCAGTAGTCCATGTAC
JMFF046L23+ AACGCCCCCAGCACCAGCGAAACTTCATCCTTACTGCTGCACAGGCAGTAGTCCATGTAC
JMFF043H20+ AACGCCCCCAGCACCAGCGAAACTTCATCCTTACTGCTGCACAGGCAGTAGTCCATGTAC
JMFF023I02+ AACGCCCCCAGCACCAGCNAAACTTCATCCTTACTGCTGCACAGGCAGTAGTCCATGTAC
____________________________________________________________
consensus AACGCCCCCAGCACCAGCGAAACTTCATCCTTACTGCTGCACAGGCAGTAGTCCATGTAC
. : . : . : . : . : . :
JMFF009P01+ TCCAGCGCCCACTGCGAGCACTTCTGCAGCTGCTCCTCCACTCCCATCCCGCACATCGCC
JMFF020G17+ TCCAGCGCCCACTGCGAGCACTTCTGCAGCTGCTCCTCCACTCCCATCCCGCACATCGCC
JMFF046L23+ TCCAGCGCCCACTGCGAGCACTTCTGCAGCTGCTCTTCCACTCCCATCCCGCACATCGCC
JMFF043H20+ TCCAGCGCCCACTGCGAGCACTTCTGCAGCTGCTCCTCCACTCCCATCCCGCACATCGCC
JMFF023I02+ TCCAGCGCCCACTGCGAGCACTTCTGCAGCTGCTCCTCCACTCCCATCCCGCACATCGCC
____________________________________________________________
consensus TCCAGCGCCCACTGCGAGCACTTCTGCAGCTGCTCCTCCACTCCCATCCCGCACATCGCC
. : . : . : . : . : . :
JMFF009P01+ ATTCCGCCGCCGCCTAAAACCTTCCGCTCGTCTCTATCTACGCCTTTCTCTGCACGCACA
JMFF020G17+ ATTCCGCCGCCGCCTAAAACCTTCCGCTCGTCCCTATCTACGCCTTTCTCTGCACGCACA
JMFF046L23+ ATTCCGCCGCCGCCTAAAACCTTCCGCTCGTCCCTATCTACGCCTTTCTCTGCACGCACA
JMFF043H20+ ATTCCGCCGCCGCCTAAAACCTTCCGCTCGTCCCTATCTACGCCTTTCTCTGCACGCACA
JMFF023I02+ ATTCCGCCGCCGCCTAAAACCTTCCGCTCGTCCCTATCTACGCCTTTCTCTGCACGCACA
____________________________________________________________
consensus ATTCCGCCGCCGCCTAAAACCTTCCGCTCGTCCCTATCTACGCCTTTCTCTGCACGCACA
. : . : . : . : . : . :
JMFF009P01+ ACACACTTCCGTGCC
JMFF020G17+ ACACACTTCCGTGCCCTATTCGTTCACAAGATACAACGCATCCGTCAGATATGAGCACGA
JMFF046L23+ ACACACTTCCGTGCCCTATTCGTTCACAAGATACAACGCATCCGTCAGATATGAGCACGA
JMFF043H20+ ACACACTTCCGTGCCCTATTCGTTCACAAGATACAACGCATCCGTCAGATATGAGCACGA
JMFF023I02+ ACACACTTCCGTGCCCTATTCGTTCACAAGATACAACGCATCCGTCAGATATGAGCACGA
____________________________________________________________
consensus ACACACTTCCGTGCCCTATTCGTTCACAAGATACAACGCATCCGTCAGATATGAGCACGA
. : . : . : . : . : . :
JMFF020G17+ AAACCGATGAATTAAACCTACAAACTCACAACTCGTACAATGAAGATGTGAAGTAA
JMFF046L23+ AAACCGATGAATTAAACCTACAAACTCAGTACTCGTACAATGAAGATGTGAAGTAA
JMFF043H20+ AAACCGATGAATTAAACCTACAAACTCACAACTCGTACAATGAAGATGTGAAGTAA
JMFF023I02+ AAACCGATGAATTAAACCTACAAACTCACAACTCGTACAATGAAGATGTGAAGTAATAAC
____________________________________________________________
consensus AAACCGATGAATTAAACCTACAAACTCACAACTCGTACAATGAAGATGTGAAGTAATAAC