Contig 000117:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF021M10-                                  AATGATATGATAAGTTTACAAACTACGAGGTGGAAC
                      ____________________________________________________________
consensus                                     AATGATATGATAAGTTTACAAACTACGAGGTGGAAC
 
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rJMFF021M10-          AAAAATATGTAACATGGAGAACATGTCTAAATCCTTATGGTTGTTTTTACAACGGTTGCA
rJMSF012I21-                                   TCTAAATCCTTATGGTTGTTTTTACAACGGTTGCA
                      ____________________________________________________________
consensus             AAAAATATGTAACATGGAGAACATGTCTAAATCCTTATGGTTGTTTTTACAACGGTTGCA
 
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rJMFF021M10-          GATTGCGCCGCCGTACGCCTAGGGGCGGCGGCGGTGCTGGCACTCCACCGGAGCAACCGG
rJMSF012I21-          GATTGCGCCGCCGTACGCCTAGGGGCGGCGGCGGTGCTGGCACTCCACCGGAGCAACCGG
                      ____________________________________________________________
consensus             GATTGCGCCGCCGTACGCCTAGGGGCGGCGGCGGTGCTGGCACTCCACCGGAGCAACCGG
 
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rJMFF021M10-          GAATCTAGCGGTGTCCACGCAATAATTGTACACCATATGGTTAGCCCGAACCCATATGAG
rJMSF012I21-          GAATCTAGCGGTGTCCACGCAATAATTGTACACCATATGGTTAGCCCGAACCCATATGAG
                      ____________________________________________________________
consensus             GAATCTAGCGGTGTCCACGCAATAATTGTACACCATATGGTTAGCCCGAACCCATATGAG
 
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rJMFF021M10-          CTGGTGGGCCTGATGCACGCTCAACTCCGACACCGTCGGCTCGTCCCACCAGAACCGCTT
rJMSF012I21-          CTGGTGGGCCTGATGCACGCTCAACTCCGACACCGTCGGCTCGTCCCACCAGAACCGCTT
                      ____________________________________________________________
consensus             CTGGTGGGCCTGATGCACGCTCAACTCCGACACCGTCGGCTCGTCCCACCAGAACCGCTT
 
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rJMFF021M10-          CTCGCTGCTACTGCTACACTGGCTGGTATAATTCGCGGCGGCGGCGTTGGCGGCGGGGCA
rJMSF012I21-          CTCGCTGCTACTGCTACACTGGCTGGTATAATTCGCGGCGGCGGCGTTGGCGGCGGGGCA
                      ____________________________________________________________
consensus             CTCGCTGCTACTGCTACACTGGCTGGTATAATTCGCGGCGGCGGCGTTGGCGGCGGGGCA
 
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rJMFF021M10-          TTCACACGCGTCAATCTCGAAGCCGGTGTAGGAGGCAATGAACGGCGCGTGACTCCAGTC
JMFN001E01+                   CGTCAATCTCGAAGCCGGTGTAGGAGGCAATGAACGGCGCGTGACTCCAGTC
rJMSF012I21-          TTCACACGCGTCAATCTCGAAGCCGGTGTAGGAGGCAATGAACGGCGCGTGACTCCAGTC
                      ____________________________________________________________
consensus             TTCACACGCGTCAATCTCGAAGCCGGTGTAGGAGGCAATGAACGGCGCGTGACTCCAGTC
 
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rJMFF021M10-          GGTCTTAACCCGCCCTCCTTGCGTGGCCCAATCGTCGGCGTTCCATATCGAACTGTAAAC
JMFN001E01+           GGTCTTAACCCGCCCTCCTTGCGTGGCCCAATCGTCGGCGTTCCATATCGAACTGTAAAC
rJMSF012I21-          GGTCTTAACCCGCCCTCCTTGCGTGGCCCAATCGTCGGCGTTCCATATCGAACTGTAAAC
JMFN015F01+                                                         ATCGAACTGTAAAC
                      ____________________________________________________________
consensus             GGTCTTAACCCGCCCTCCTTGCGTGGCCCAATCGTCGGCGTTCCATATCGAACTGTAAAC
 
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rJMFF021M10-          CCCCATGGCTTGGTCGCGGGGGAACGGAATCCCCTTCGCCTCCAGATTTGAGTGTACTCT
JMFN001E01+           CCCCATGGCTTGGTCGCGGGGGAACGGAATCCCCTTCGCCTCCAGATTTGAGTGTACTCT
rJMSF012I21-          CCCCATGGCTTGGTCGCGGGGGAACGGAATCCCCTTCGCCTCCAGATTTGAGTGTACTCT
JMFN015F01+           CNCCATGGCTTGGTCGCGGGGGAACGGAATCCCCTTCGCCTCCAGATTTGAGTGTACTCT
                      ____________________________________________________________
consensus             CCCCATGGCTTGGTCGCGGGGGAACGGAATCCCCTTCGCCTCCAGATTTGAGTGTACTCT
 
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rJMFF021M10-          GATCGGCATCTCATCCACCACGAACAGAACTTGGCTACGGGTCCAGACAATGGAGTAGCG
JMFN001E01+           GATCGGCGTCTCATCCACCACGAACAGAACTTGGCTACGGGTCCAGACAATGGAGTAGCG
rJMSF012I21-          GATCGGCGTCTCATCCACCACGAACAGAACTTGGCTACGGGTCCAGACAATGGAGTAGCG
JMFN015F01+           GATCGGCGTCTCATCCACCACGAACAGAACTTGGCTACGGGTCCAGACAATGGAGTAGCG
JMFF021M10+                                                  GGTCCAGACAATGGAGTAGCG
                      ____________________________________________________________
consensus             GATCGGCGTCTCATCCACCACGAACAGAACTTGGCTACGGGTCCAGACAATGGAGTAGCG
 
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rJMFF021M10-          ATGGAAGTCCTTAGTTGGGTCAAACCAAAGATTCACTCTTTCTTCCCTGTTTCCGACGCC
JMFN001E01+           ATGGAAGTCCTTAGTTGGGTCAAACCAAAGATTCACTCTTTCTTCCCTGTTTCCGACGCC
rJMSF012I21-          ATGGAAGTCCTTAGTTGGGTCAAACCAAAGATTCACTCTTTCTTCCCTGTTTCCGACGCC
JMFN015F01+           ATGGAAGTCCTTAGTTGGGTCAAACCAAAGATTCACTCTTTCTTCCCTGTTTCCGACGCC
JMFF021M10+           ATGGAAGTCCTTAGTTGGGTCAAACCAAAGATTCACTCTTTCTTCCCTGTTTCCGACGCC
                      ____________________________________________________________
consensus             ATGGAAGTCCTTAGTTGGGTCAAACCAAAGATTCACTCTTTCTTCCCTGTTTCCGACGCC
 
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rJMFF021M10-          ATTGACGTACACATTTGTTTGAACCA                                  
JMFN001E01+           ATTGACGTACACATTTGTTTGAACCAGATAGGGTTCA                       
rJMSF012I21-          ATTGACGTACACATTTGTTTGAACCAGATAGGGTTCANCGGAAGTGTTGCCCAGAAACTC
JMFN015F01+           ATTGACGTACACATTTGTTTGAACCAGATAGGGTTCACCGGAAGTGTTGCCCAGAAACTC
JMFF021M10+           ATTGACGTACACATTTGTTTGAACCAGATAGGGTTCACCGGAAGTGTTGCCCAGAAACTC
                      ____________________________________________________________
consensus             ATTGACGTACACATTTGTTTGAACCAGATAGGGTTCACCGGAAGTGTTGCCCAGAAACTC
 
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rJMSF012I21-          AAAATCAAATTCATGGTGCTTTGGCCCATCCGATGACATATAAAAGGCGGTAACAGTTCC
JMFN015F01+           AAAATCAAATTCATGGTGCTTTGGCCCATCCGATGACATATAGAAGGCGGTAACAGTTCC
JMFF021M10+           AAAATCAAATTCATGGTGCTTTGGCCCATCCGATGACATATAGAAGGCGGTAACAGTTCC
                      ____________________________________________________________
consensus             AAAATCAAATTCATGGTGCTTTGGCCCATCCGATGACATATAGAAGGCGGTAACAGTTCC
 
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rJMSF012I21-          GGC                                                         
JMFN015F01+           GGCGGAATCACCCTCAACAAGCTTGATTTGAGCAGTGACTTTTCCGAACATATATTTACT
JMFF021M10+           GGCGGAATCACCCTCAACAAGCTTGATTTGAGCAGTGACTTTTCCGAACATATATTTACT
                      ____________________________________________________________
consensus             GGCGGAATCACCCTCAACAAGCTTGATTTGAGCAGTGACTTTTCCGAACATATATTTACT
 
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JMFN015F01+           CTTAGATTGAAACCCAGCGCCGGAATAGCTATCGAGCTTCATGTGGAGAACATCTCCGTC
JMFF021M10+           CTTAGATTGAAACCCAGCGCCGGAATAGCTATCGAGCTTCATGTGGAGAACATCTCCGTC
                      ____________________________________________________________
consensus             CTTAGATTGAAACCCAGCGCCGGAATAGCTATCGAGCTTCATGTGGAGAACATCTCCGTC
 
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JMFN015F01+           AACGAGTAAATGATCAGTCGCCGAGGTCGGCTCAAAAAGCTCGTCAAATCTCGCCGTGGC
JMFF021M10+           AACGAGTAAATGATCAGTCGCCGAGGTCGGCTCAAAAAGCTCGTCAAATCTCGCCGTGGC
                      ____________________________________________________________
consensus             AACGAGTAAATGATCAGTCGCCGAGGTCGGCTCAAAAAGCTCGTCAAATCTCGCCGTGGC
 
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JMFN015F01+           GGCGCTGGAAAGACCCACCATTAAAACCCCAACACAGAACAACCCAAAGATTACAACACG
JMFF021M10+           GGCGCTGGAAAGACCCACCATTAAAACCCCAACACAGAACAACCCAAAGATTACAACACG
                      ____________________________________________________________
consensus             GGCGCTGGAAAGACCCACCATTAAAACCCCAACACAGAACAACCCAAAGATTACAACACG
 
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JMFN015F01+           CGAAAACGCCATTATAGAGAGAGAGGGGGAAGATGGAACCAAGTGAAGCT          
JMFF021M10+           CGAAAACGCCATTATAGAGAGAGAGGGGGAAGATGGAACCAAGTGAAGCTTCTTCTCTGC
                      ____________________________________________________________
consensus             CGAAAACGCCATTATAGAGAGAGAGGGGGAAGATGGAACCAAGTGAAGCTTCTTCTCTGC