Contig 000116:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021L12Sequence431000116 (3)ref|XP_009774026.1|7e-37PREDICTED: LOW QUALITY PROTEIN: metal transporter Nramp6-like [Nicotiana sylves613004013 (3)emb|CDO98224.1|1e-59unnamed protein product [Coffea canephora]
JMSF020F19Sequence723000116 (3)ref|XP_011082369.1|9e-95PREDICTED: metal transporter Nramp6-like isoform X4 [Sesamum indicum]740004013 (3)ref|XP_011082362.1|5e-81PREDICTED: metal transporter Nramp1-like isoform X3 [Sesamum indicum]
JMSF032C10Sequence697000116 (3)ref|XP_009594426.1|3e-90PREDICTED: LOW QUALITY PROTEIN: metal transporter Nramp6-like [Nicotiana toment770004013 (3)ref|XP_011082362.1|3e-77PREDICTED: metal transporter Nramp1-like isoform X3 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF020F19+ CGCNA
                      ____________________________________________________________
consensus CGCNA
 
. : . : . : . : . : . :
JMSF032C10+ ACTAAGAAAGCAATGAATATCTCGAGTTTCCTCACCCCA
JMSF020F19+ AAGCATCCAACAATAGTGAATACTAAGAAAGCAATGAATATCTCGAGTTTCCTCACCCCA
                      ____________________________________________________________
consensus AAGCATCCAACAATAGTGAATACTAAGAAAGCAATGAATATCTCGAGTTTCCTCACCCCA
 
. : . : . : . : . : . :
JMSF032C10+ TATTGTTGTAATAATAATAGAACAAATGTACTGCATCCCGTAATAAGTACACCACACCAC
JMSF020F19+ TATTGTTGTAATAATAATAGAACCAATGTACTGCATCCCGTAATAAGTACACCACACCAC
                      ____________________________________________________________
consensus TATTGTTGTAATAATAATAGAACCAATGTACTGCATCCCGTAATAAGTACACCACACCAC
 
. : . : . : . : . : . :
JMSF032C10+ AGTGGTACTTTAAAGAGCATGTTCAAAGCAAAAGCTGTTCCAATCACTTCAGGAATGTCA
JMSF020F19+ AGTGGTACTTTAAAGAGCATGTTCAAAGCAAAAGCTGTTCCAATCACTTCAGGAATGTCA
                      ____________________________________________________________
consensus AGTGGTACTTTAAAGAGCATGTTCAAAGCAAAAGCTGTTCCAATCACTTCAGGAATGTCA
 
. : . : . : . : . : . :
JMSF032C10+ CACGCAACGATAGCAACTTCCGCAAGAACCCATAAGATGAAATTTGGCACCCTGGAGTAT
JMSF020F19+ CACGCAACGATAGCAACTTCCGCAAGAACCCATAAGATGAAATTTGGCACCCTGGAGTAT
                      ____________________________________________________________
consensus CACGCAACGATAGCAACTTCCGCAAGAACCCATAAGATGAAATTTGGCACCCTGGAGTAT
 
. : . : . : . : . : . :
JMSF032C10+ TCCTTTCTACAATGCTCCGCTAAATGCTTCCCTGTGACAACTCCGAGGTTTGCTGCAAGA
JMSF020F19+ TCCTTTCTACAATGCTCCGCTAAATGCTTCCCTGTGACAACTCCGAGGTTTGCTGCAAGA
JMFF021L12+ TTGCTGCAAGA
                      ____________________________________________________________
consensus TCCTTTCTACAATGCTCCGCTAAATGCTTCCCTGTGACAACTCCGAGGTTTGCTGCAAGA
 
. : . : . : . : . : . :
JMSF032C10+ GATTGGATTAGAAGAGCAGCAAACGAGGCCAATAGTATGATCCATAGTAACCCATATTTG
JMSF020F19+ GATTGGATTAGAAGAGCAGCAAACGAGGCCAATAGTATGATCCATAGTAACCCATATTTG
JMFF021L12+ GATTGGATTAGAAGAGCAGCAAACGAGGCCAATAGTATGATCCATAGTAACCCATATTTG
                      ____________________________________________________________
consensus GATTGGATTAGAAGAGCAGCAAACGAGGCCAATAGTATGATCCATAGTAACCCATATTTG
 
. : . : . : . : . : . :
JMSF032C10+ TACTGAGCTCCAGCCTCCAGATCTGTCTGAAAGTTTCCAGGGTCAATATAAGCTATACAA
JMSF020F19+ TACTGAGCTCCAGCCTCCAGATCTGTCTGAAAGTTTCCAGGGTCAATATAAGCTATACAA
JMFF021L12+ TACTGAGCTCCAGCCTCCAGATCTGTCTGAAAGTTTCCAGGGTCAATATAAGCTATACAA
                      ____________________________________________________________
consensus TACTGAGCTCCAGCCTCCAGATCTGTCTGAAAGTTTCCAGGGTCAATATAAGCTATACAA
 
. : . : . : . : . : . :
JMSF032C10+ ACAAGGAAGCCTGGACCCAAATATGAAAAGAAGTTTTTCCAGCTTTTCTTATCAGGTACG
JMSF020F19+ ACAAGGAAGCCTGGACCCAAATATGAAAAGAAGTTTTTCCAGCTTTTCTTATCAGGTACG
JMFF021L12+ ACAAGGAAGCCTGGACCCAAATATGAAAAGAAGTTTTTCCAGCTTTTCTTATCAGGTACG
                      ____________________________________________________________
consensus ACAAGGAAGCCTGGACCCAAATATGAAAAGAAGTTTTTCCAGCTTTTCTTATCAGGTACG
 
. : . : . : . : . : . :
JMSF032C10+ ACAATCTGGTCGTGTTCAATGTTATCAATGAGTGGCTCATTGGAGAGGCTCCGATTGGCG
JMSF020F19+ ACAATCTGGTCGTGTTCAATGTTATCAATGAGTGGCTCATTGGAGAGGCTCCGATTGGCG
JMFF021L12+ ACAATCTGGTCGTGTTCAATGTTATCAATGAGTGGCTCATTGGAGAGGCTCCGATTGGCG
                      ____________________________________________________________
consensus ACAATCTGGTCGTGTTCAATGTTATCAATGAGTGGCTCATTGGAGAGGCTCCGATTGGCG
 
. : . : . : . : . : . :
JMSF032C10+ GAGCTGGTCATGAACTGGGACTGTGCCGATTGCAAAGCCGCCATTTTTACAACTCCCCTT
JMSF020F19+ GAGCTGGTCATGAACTGGGACTGTGCCGATTGCAAAGCCGCCATTTTTACAACTCCCCTT
JMFF021L12+ GAGCTGGTCATGAACTGGGACTGTGCCGATTGCAAAGCCGCCATTTTTACAACTCCCCTT
                      ____________________________________________________________
consensus GAGCTGGTCATGAACTGGGACTGTGCCGATTGCAAAGCCGCCATTTTTACAACTCCCCTT
 
. : . : . : . : . : . :
JMSF032C10+ TATTCCGAACCTCCGTTTCAATTCAATGCAACATAAATATATAAATATTAAAACTAGGCC
JMSF020F19+ TATTCCGAACCTCCGTTTCAATTCAATGCAACATAAATATATAAATATTAAAACTAGGCC
JMFF021L12+ TATTCCGAACCTCCGTTTCAATTCAATGCAACATAAATATATAAATATTAAAACTAGGCC
                      ____________________________________________________________
consensus TATTCCGAACCTCCGTTTCAATTCAATGCAACATAAATATATAAATATTAAAACTAGGCC
 
. : . : . : . : . : . :
JMSF032C10+ TGCACCAGTATGTCCAGAAGAGAAGAGAAGAGGAGGAGAGGAAATTGGATGGAGTAC
JMSF020F19+ TGCACCAGTATGTCCAGAAGAGAAGAGAAGAGGAGGAGAGGAAATTGGATGGAGTAC
JMFF021L12+ TGCACCAGTATGTCCAGAAGAGAAGAGAAGAGGAGGAGAGGAAATTGGATGGAGTACAAG
                      ____________________________________________________________
consensus TGCACCAGTATGTCCAGAAGAGAAGAGAAGAGGAGGAGAGGAAATTGGATGGAGTACAAG