| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002O04 | Sequence | 399 | 000115 (9) | 721 | 008402 (5) | ref|XP_006342510.1| | 3e-27 | PREDICTED: protein EARLY FLOWERING 3-like [Solanum tuberosum] | |||
| JMFF021I24 | Sequence | 522 | 000115 (9) | 247 | 008402 (5) | ||||||
| JMFF051D17 | Sequence | 624 | 000115 (9) | gb|KDP34132.1| | 6e-13 | hypothetical protein JCGZ_07703 [Jatropha curcas] | 551 | 008402 (5) | ref|XP_006342510.1| | 4e-23 | PREDICTED: protein EARLY FLOWERING 3-like [Solanum tuberosum] |
| JMFF051P21 | Sequence | 624 | 000115 (9) | ref|XP_006342510.1| | 1e-06 | PREDICTED: protein EARLY FLOWERING 3-like [Solanum tuberosum] | 558 | 008402 (5) | ref|XP_006342510.1| | 4e-24 | PREDICTED: protein EARLY FLOWERING 3-like [Solanum tuberosum] |
| JMFS121B03 | Sequence | 570 | 000115 (9) | gb|KDO79983.1| | 5e-09 | hypothetical protein CISIN_1g004928mg [Citrus sinensis] gb|KDO79984.1| hypotheti | |||||
| JMFS152D01 | Sequence | 620 | 000115 (9) | ref|XP_004245125.1| | 7e-27 | PREDICTED: protein EARLY FLOWERING 3-like [Solanum lycopersicum] | |||||
| JMFS167G03 | Sequence | 599 | 000115 (9) | gb|KDO79983.1| | 2e-17 | hypothetical protein CISIN_1g004928mg [Citrus sinensis] gb|KDO79984.1| hypotheti | |||||
| JMSF012O21 | Sequence | 310 | 000115 (9) | 716 | 002887 (2) | ref|XP_009782254.1| | 5e-54 | PREDICTED: protein EARLY FLOWERING 3-like isoform X2 [Nicotiana sylvestris] | |||
| JMSF028G17 | Sequence | 680 | 000115 (9) | emb|CAN79509.1| | 7e-31 | hypothetical protein VITISV_038336 [Vitis vinifera] | 694 | 002887 (2) | ref|XP_009629368.1| | 6e-53 | PREDICTED: protein EARLY FLOWERING 3-like isoform X2 [Nicotiana tomentosiformis |
This contig is upended
. : . : . : . : . : . :
JMSF028G17+ TGATGGTGGCAGATGCATTGG
____________________________________________________________
consensus TGATGGTGGCAGATGCATTGG
. : . : . : . : . : . :
JMSF028G17+ AAGAAACATACGTCTTTCATGTCCATTACCCTGGCTTGGTGAGGGAGGGATCAAATTGGA
____________________________________________________________
consensus AAGAAACATACGTCTTTCATGTCCATTACCCTGGCTTGGTGAGGGAGGGATCAAATTGGA
. : . : . : . : . : . :
JMSF028G17+ AGCGTTGTTGGGGTTAGGGGGCAAAACTCCATGATCAAATCGCTGAGAGGGGATGCTGAG
JMFF051P21+ CCATGATCAAATCGCTGAGAGGGGATGCTGAG
JMFS152D01+ CGCTGAGAGGGGATGCTGAG
JMFS167G03+ TGATCAAATCGCTGAGAGGGGATGCTGAG
JMFF051D17+ CCATGATCAAATCGCTGAGAGGGGATGCTGAG
____________________________________________________________
consensus AGCGTTGTTGGGGTTAGGGGGCAAAACTCCATGATCAAATCGCTGAGAGGGGATGCTGAG
. : . : . : . : . : . :
JMSF028G17+ CTGCTCATAGAGAGCCATCTTGTTCCTTGGAGGAGCTCTTGGTCCTCCCTTTTCAGTATC
JMFF051P21+ CTGCTCATAGAGAGCCATCTGTTTCC-TGGAGGAGCTCTTGGTCCTCCCTTTTCAGTATC
JMFS152D01+ CTGCTCATAGAGAGCCATCTTGTTCCTTGGAGGAGCTCTTGGTCCTCCCTTTTCAGTATC
JMFS167G03+ CTGCTCATAGAGAGCCATCTTGTTCCTTGGAGGAGCTCTTGGTCCTCCCTTTTCAGTATC
JMFS121B03+ AGCCATCTTGTTCCTTGGAGGAGCTCTTGGTCCTCCCTTTTCAGTATC
JMFF051D17+ CTGCTCATAGAGAGCCATCTTGTTCC-TGGAGGAGCTCTNGGTCCTCCCTTTTCAGTATC
____________________________________________________________
consensus CTGCTCATAGAGAGCCATCTTGTTCCTTGGAGGAGCTCTTGGTCCTCCCTTTTCAGTATC
. : . : . : . : . : . :
JMSF028G17+ ATTAACATGAAGCCTTGGAAACATTGGCCCCATTATTTTCTCCTCACCTTTCCCTCTCTT
JMFF051P21+ ATTAACATGAAGCCTTGGAAACATTGGCCCCATTATTTTCTCCTCACCTTTCCCTCTCTT
JMFS152D01+ ATTAACATGAAGCCTTGGAAACATTGGCCCCATTATTTTCTCCTCACCTTTCCCTCTCTT
JMFS167G03+ ATTAACATGAAGCCTTGGAAACATTGGCCCCATTATTTTCTCCTCACCTTTCCCTCTCTT
JMFS121B03+ ATTAACATGAAGCCTTGGAAACATTGGCCCCATTATTTTCTCCTCACCTTTCCCTCTCTT
JMFF051D17+ ATTAACATGAAGCCTTGGAAACATTGGCCCCATTATTTTCTCCTCACCTTTCCCTCTCTT
JMFF021I24+ AAACATTGGCCCCATTATTTTCTCCTCACCTTTCCCTCTCTT
____________________________________________________________
consensus ATTAACATGAAGCCTTGGAAACATTGGCCCCATTATTTTCTCCTCACCTTTCCCTCTCTT
. : . : . : . : . : . :
JMSF028G17+ CATCTTCTCTCTAGATTCAACCAGTCTCAAAACATCGAGAGCCAAACCACTTGCTAAAAT
JMFF051P21+ CATCTTCTCTCTAGATTCAACCAGTCTCAAAACATCGAGAGCCAAACCACTTGCTAAAAT
JMFS152D01+ CATCTTCTCTCTAGATTCAACCAGTCTCAAAACATCGAGAGCCAAACCACTTGCTAAAAT
JMFS167G03+ CATCTTCTCTCTAGATTCAACCAGTCTCAAAACATCGAGAGCCAAACCACTTGCTAAAAT
JMFS121B03+ CATCTTCTCTCTAGATTCAACCAGTCTCAAAACATCGAGAGCCAAACCACTTGCTAAAAT
JMFF051D17+ CATCTTCTCTCTAGATTCAACCAGTCTCAAAACATCGAGAGCCAAACCACTTGCTAAAAT
JMFF021I24+ CATCTTCTCTCTAGATTCAACCAGTCTCAAAACATCGAGAGCCAAACCACTTGCTAAAAT
____________________________________________________________
consensus CATCTTCTCTCTAGATTCAACCAGTCTCAAAACATCGAGAGCCAAACCACTTGCTAAAAT
. : . : . : . : . : . :
JMSF028G17+ CCCCACTTTAAAATCAACCCGCACATAAAAAATCCACAACTCGCAGAACAGCGTAAATCA
JMFF051P21+ CCCCACTTTAAAATCAACCCGCACATAAAAAATCCACAACTCGCAGAACAGCGTAAATCA
JMFS152D01+ CCCCACTTTAAAATCAACCCGCACATAAAAAATCCACAACTCGCAGAACAGCGTAAATCA
JMFS167G03+ CCCCACTTTAAAATCAACCCGCACATAAAAAATCCACAACTCGCAGAACAGCGTAAATCA
JMFS121B03+ CCCCACTTTAAAATCAACCCGCACATAAAAAATCCACAACTCGCAGAACAGCGTAAATCA
JMFF051D17+ CCCCACTTTAAAATCAACCCGCACATAAAAAATCCACAACTCGCAGAACAGCGTAAATCA
JMFF002O04+ CACATAAAAAATCCACAACTCGCAGAACAGCGTAAATCA
JMSF012O21+ AAAAAATCCACAACTCGCAGAACAGCGTAAATCA
JMFF021I24+ CCCCACTTTAAAATCAACCCGCACATAAAAAATCCACAACTCGCAGAACAGCGTAAATCA
____________________________________________________________
consensus CCCCACTTTAAAATCAACCCGCACATAAAAAATCCACAACTCGCAGAACAGCGTAAATCA
. : . : . : . : . : . :
JMSF028G17+ GATTCAGTTGAGCTTAGAAATTGGGATTCACAGGCTGAAACGACATAAATCGATTCTTCT
JMFF051P21+ GATTCAGTTGAGCTTAGAAATTGGGATTCACAGGCTGAAACGACATAAATCGATTCTTCT
JMFS152D01+ GATTCAGTTGAGCTTAGAAATTGGGATTCACAGGCTGAAACGACATAAATCGATTCTTCT
JMFS167G03+ GATTCAGTTGAGCTTAGAAATTGGGATTCACAGGCTGAAACGACATAAATCGATTCTTCT
JMFS121B03+ GATTCAGTTGAGCTTAGAAATTGGGATTCACAGGCTGAAACGACATAAATCGATTCTTCT
JMFF051D17+ GATTCAGTTGAGCTTAGAAATTGGGATTCACAGGCTGAAACGACATAAATCGATTCTTCT
JMFF002O04+ GATTCAGTTGAGCTTAGAAATTGGGATTCACAGGCTGAAACGACATAAATCGATTCTTCT
JMSF012O21+ GATTCAGTTGAGCTTAGAAATTGGGATTCACAGGCTGAAACGACATAAATCGATTCTTCT
JMFF021I24+ GATTCAGTTGAGCTTAGAAATTGGGATTCACAGGCTGAAACGACATAAATCGATTCTTCT
____________________________________________________________
consensus GATTCAGTTGAGCTTAGAAATTGGGATTCACAGGCTGAAACGACATAAATCGATTCTTCT
. : . : . : . : . : . :
JMSF028G17+ GCACAAAATCCGGGCAAACCCGCAATTTCAGAAACGCAAGAGACTCTTCAAACCCAGTAA
JMFF051P21+ GCACAAAATCCGGGCAAACCCCCAATTTCAGAAACGCAAGAGACTCTTCAAACCCAGTAA
JMFS152D01+ GCACAAAATCCGGGCAAACCCCCAATTTCAGAAACGCAAGAGACTCTTCAAACCCAGTAA
JMFS167G03+ GCACAAAATCCGGGCAAACCCCCAATTTCAGAAACGCAAGAGACTCTTCAAACCCAGTAA
JMFS121B03+ GCACAAAATCCGGGCAAACCCCCAATTTCAGAAACGCAAGAGACTCTTCAAACCCAGTAA
JMFF051D17+ GCACAAAATCCGGGCAAACCCCCAATTTCAGAAACGCAAGAGACTCTTCAAACCCAGTAA
JMFF002O04+ GCACAAAATCCGGGCAAACCCCCAATTTCAGAAACGCAAGAGACTCTTCAAACCCAGTAA
JMSF012O21+ GCACAAAATCCGGGCAAACCCCCAATTTCAGAAACGCAAGAGACTCTTCAAACCCAGTAA
JMFF021I24+ GCACAAAATCCGGGCAAACCCCCAATTTCAGAAACGCAAGAGACTCTTCAAACCCAGTAA
____________________________________________________________
consensus GCACAAAATCCGGGCAAACCCCCAATTTCAGAAACGCAAGAGACTCTTCAAACCCAGTAA
. : . : . : . : . : . :
JMSF028G17+ CCCGAAATCGATTCCAACAGCCTAAGAGTCAACTTTTTTTCCTGTTCTTTTCTTTTCTAA
JMFF051P21+ CCCGAAATCGATTCCAACAGCCTAAGAGTCAACTTTTTTTCCTGTTCTTTTCTTTTCTAA
JMFS152D01+ CCCGAAATCGATTCCAACAGCCTAAGAGTCAACTTTTTTTCCTGTTCTTTTCTTTTCTAA
JMFS167G03+ CCCGAAATCGATTCCAACAGCCTAAGAGTCAACTTTTTTTCCTGTTCTTTTCTTTTCTAA
JMFS121B03+ CCCGAAATCGATTCCAACAGCCTAAGAGTCAACTTTTTTTCCTGTTCTTTTCTTTTCTAA
JMFF051D17+ CCCGAAATCGATTCCAACAGCCTAAGAGTCAACTTTTTTTCCTGTTCTTTTCTTTTCTAA
JMFF002O04+ CCCGAAATCGATTCCAACAGCCTAAGAGTCAACTTTTTTTCCTGTTCTTTTCTTTTCTAA
JMSF012O21+ CCCGAAATCGATTCCAACAGCCTAAGAGTCAACTTTTTTTCCTGTTCTTTTCTTTTCTAA
JMFF021I24+ CCCGAAATCGATTCCAACAGCCTAAGAGTCAACTTTTTTTCCTGTTCTTTTCTTTTCTAA
____________________________________________________________
consensus CCCGAAATCGATTCCAACAGCCTAAGAGTCAACTTTTTTTCCTGTTCTTTTCTTTTCTAA
. : . : . : . : . : . :
JMSF028G17+ GAATATCCGAGGAAACAAAGACCAAAACAATGAAACGAGAACAGATTCGAGAGATTGTAA
JMFF051P21+ GAATATCCGAGGAAACAAAGACCAAAACAATGAAACGAGAACAGATTCGAGAGATTGTAA
JMFS152D01+ GAATATCCGAGGAAACAAAGACCAAAACAATGAAACGAGAACAGATTCGAGAGATTGTAA
JMFS167G03+ GAATATCCGAGGAAACAAAGACCAAAACAATGAAACGAGAACAGATTCGAGAGATTGTAA
JMFS121B03+ GAATATCCGAGGAAACAAAGACCAAAACAATGAAACGAGAACAGATTCGAGAGATTGTAA
JMFF051D17+ GAATATCCGAGGAAACAAAGACCAAAACAATGAAACGAGAACAGATTCGAGAGATTGTAA
JMFF002O04+ GAATATCCGAGGAAACAAAGACCAAAACAATGAAACGAGAACAGATTCGAGAGATTGTAA
JMSF012O21+ GAATATCCGAGGAAACAAAGACCAAAACAATGAAACGAGAACAGATTCGAGAGATTGTAA
JMFF021I24+ GAATATCCGAGGAAACAAAGACCAAAACAATGAAACGAGAACAGATTCGAGAGATTGTAA
____________________________________________________________
consensus GAATATCCGAGGAAACAAAGACCAAAACAATGAAACGAGAACAGATTCGAGAGATTGTAA
. : . : . : . : . : . :
JMSF028G17+ AAGAAAGAGGAAAAGTTTATCGATTCTTGAAGGGCAAAAAAGGAGAGGATCGAAAGAG
JMFF051P21+ AAGAAAGAGGAAAAGTTTATCGATTCTTGAAGGGCAAAAAAGGAGAGGATCGAAAGAGAA
JMFS152D01+ AAGAAAGAGGAAAAGTTTATCGATTCTTGAAGGGC
JMFS167G03+ AAGAAAGAGGAAAAGTTTATCGATTCTTGAAGGGCAAAAAAGGAGAGGATCGAAAGAGAA
JMFS121B03+ AAGAAAGAGGAAAAGTTTATCGATTCTTGAAGGGCAAAAAAGGAGAGGATCGAAAGAGAA
JMFF051D17+ AAGAAAGAGGAAAAGTTTATCGATTCTTGAAGGGCAAAAAAGGAGAGGATCGAAAGAGAA
JMFF002O04+ AAGAAAGAGGAAAAGTTTATCGATTCTTGAAGGGCAAAAAAGGAGAGGATCGAAAGAGAA
JMSF012O21+ AAGAAAGAGGAAAAGTTTATCGATTCTTGAAGG
JMFF021I24+ AAGAAAGAGGAAAAGTTTATCGATTCTTGAAGGGCAAAAAAGGAGAGGATCGAAAGAGAA
____________________________________________________________
consensus AAGAAAGAGGAAAAGTTTATCGATTCTTGAAGGGCAAAAAAGGAGAGGATCGAAAGAGAA
. : . : . : . : . : . :
JMFF051P21+ GAAGCTATGTGAAAAGGGATACGGCAAAAGTGCTTAGTTTGTGGACCCAAATG
JMFS167G03+ GAAGCTATGT-AAAAGGGATACGGCAAAAGT
JMFS121B03+ GAAGCTATGTGAAAAGGGATACGGCAAAAGTGCTTAGTTTGT
JMFF051D17+ GAAGCTATGTGAAAAGGGATACGGCAAAAGTGCTTAGTTTGTGGACCCAAATG
JMFF002O04+ GAAGCTATGTGAAAAGGGATACGGCAAAAGTGCTTAGTTTGTGGACCCAAATG
JMFF021I24+ GAAGCTATGTGAAAAGGGATACGGCAAAAGTGCTTAGTTTGTGGACCCAAATGTGGATAG
____________________________________________________________
consensus GAAGCTATGTGAAAAGGGATACGGCAAAAGTGCTTAGTTTGTGGACCCAAATGTGGATAG