Contig 000111:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009G04Sequence498000111 (11)ref|XP_009594639.1|171PREDICTED: uncharacterized protein LOC104091087 [Nicotiana tomentosiformis]471000111 (11)ref|XP_009594639.1|171PREDICTED: uncharacterized protein LOC104091087 [Nicotiana tomentosiformis]
JMFF013J07Sequence614000111 (11)ref|XP_009760504.1|266PREDICTED: uncharacterized protein LOC104212842 [Nicotiana sylvestris]660000111 (11)ref|XP_009760504.1|265PREDICTED: uncharacterized protein LOC104212842 [Nicotiana sylvestris]
JMFF018D08Sequence547000111 (11)ref|XP_009760504.1|227PREDICTED: uncharacterized protein LOC104212842 [Nicotiana sylvestris]806000111 (11)ref|XP_009760504.1|323PREDICTED: uncharacterized protein LOC104212842 [Nicotiana sylvestris]
JMFF020O08Sequence543000111 (11)ref|XP_009760504.1|223PREDICTED: uncharacterized protein LOC104212842 [Nicotiana sylvestris]726000111 (11)ref|XP_009760504.1|268PREDICTED: uncharacterized protein LOC104212842 [Nicotiana sylvestris]
JMFF024O20Sequence539000111 (11)ref|XP_009760504.1|221PREDICTED: uncharacterized protein LOC104212842 [Nicotiana sylvestris]716000111 (11)ref|XP_009760504.1|291PREDICTED: uncharacterized protein LOC104212842 [Nicotiana sylvestris]
JMFN016D11Sequence575000111 (11)ref|XP_009760504.1|290PREDICTED: uncharacterized protein LOC104212842 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF020O08-                                               GAATGGATAGGAACCCCATTACC
rJMFF024O20-                                                             CCCATTACC
                      ____________________________________________________________
consensus                                                  GAATGGATAGGAACCCCATTACC
 
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rJMFF013J07-           AATACAGAATTATAAATAATACATATTTCTTTTGTACATATATAGATAGATTACTGGAG
rJMFF020O08-          AAATACAGAATTATAAATAATACATATTTCTTTTGTACATATATAGATAGATTACTGGAG
rJMFF024O20-          AAATACAGAATTATAAATAATACATATTTCTTTTGTACATATATAGATAGATTACTGGAG
rJMFF018D08-                                  TATTTCTTTTGTACATATATAGATAGATTACTGGAG
                      ____________________________________________________________
consensus             AAATACAGAATTATAAATAATACATATTTCTTTTGTACATATATAGATAGATTACTGGAG
 
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rJMFF013J07-          CCATATAGGTATATCATATATGTAGCAACCACAATCTCTAGATAAGTTCTTCACACAGTC
rJMFF009G04+                    ATATCATATATGTAGCAACCACAATCTCTAGATAAGTTCTTCACACAGTC
JMFF009G04-                     ATATCATATATGTAGCAACCACAATCTCTAGATAAGTTCTTCACACAGTC
rJMFF020O08-          CCATATAGGTATATCATATATGTAGCAACCACAATCTCTAGATAAGTTCTTCACACAGTC
rJMFF024O20-          CCATATAGGTATATCATATATGTAGCAACCACAATCTCTAGATAAGTTCTTCACACAGTC
rJMFF018D08-          CCATATAGGTATATCATATATGTAGCAAGCACAATCTCTAGATAAGTTCTTCACACAGTC
                      ____________________________________________________________
consensus             CCATATAGGTATATCATATATGTAGCAACCACAATCTCTAGATAAGTTCTTCACACAGTC
 
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rJMFF013J07-          CTGAAAAACACACTACCTATCCAATCCAAAATGACCCAAATTCGTTTTAGACTGATCAGA
rJMFF009G04+          CTGAAAAACACACTACCTATCCAATCCAAAATGACCCAAATTCGTTTTAGACTGATCAGA
JMFF009G04-           CTGAAAAACACACTACCTATCCAATCCAAAATGACCCAAATTCGTTTTAGACTGATCAGA
rJMFF020O08-          CTGAAAAACACACTACCTATCCAATCCAAAATGACCCAAATTCGTTTTAGACTGATCAGA
rJMFF024O20-          CTGAAAAACACACTACCTATCCAATCCAAAATGACCCAAATTCGTTTTAGACTGATCAGA
rJMFF018D08-          CTGAAAAACACACTACCTATCCAATCCAAAATGACCCAAATTCGTTTTAGACTGATCAGA
                      ____________________________________________________________
consensus             CTGAAAAACACACTACCTATCCAATCCAAAATGACCCAAATTCGTTTTAGACTGATCAGA
 
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rJMFF013J07-          TCAACCCTTTCTCTCAGCAGATTCGGGGAAACTGGACATGGTCATTCCAAGTCCTTCGTT
rJMFF009G04+          TCAACCCTTTCTCTCAGCAGATTCGGGGAAACTGGACATGGTCATTCCAAGTCCTTCGTT
JMFF009G04-           TCAACCCTTTCTCTCAGCAGATTCGGGGAAACTGGACATGGTCATTCCAAGTCCTTCGTT
rJMFF020O08-          TCAACCCTTTCTCTCAGCAGATTCGGGGAAACTGGACATGGTCATTCCAAGTCCTTCGTT
rJMFF024O20-          TCAACCCTTTCTCTCAGCAGATTCGGGGAAACTGGACATGGTCATTCCAAGTCCTTCGTT
rJMFF018D08-          TCAACCCTTTCTCTCAGCAGATTCGGGGAAACTGGACATGGTCATTCCAAGTCCTTCGTT
                      ____________________________________________________________
consensus             TCAACCCTTTCTCTCAGCAGATTCGGGGAAACTGGACATGGTCATTCCAAGTCCTTCGTT
 
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rJMFF013J07-          CTCGTGCTTTTGCCACCCACCTGTGTCCGCCTTGGAATGGGACCAGTAGTAGAAAATGGA
rJMFF009G04+          CTCGTGCTTTTGCCACCCACCTGTGTCCGCCTTGGAATGGGACCAGTAGTAGAAAATGGA
JMFF009G04-           CTCGTGCTTTTGCCACCCACCTGTGTCCGCCTTGGAATGGGACCAGTAGTAGAAAATGGA
rJMFF020O08-          CTCGTGCTTTTGCCACCCACCTGTGTCCGCCTTGGAATGGGACCAGTAGTAGAAAATGGA
rJMFF024O20-          CTCGTGCTTTTGCCACCCACCTGTGTCCGCCTTGGAATGGGACCAGTAGTAGAAAATGGA
rJMFF018D08-          CTCGTGCTTTTGCCACCCACCTGTGTCCGCCTTGGAATGGGACCAGTAGTAGAAAATGGA
JMFN016D11+                 CTTTTGCCACCCACCTGTGTCCGCCTTGGAATGGGACCAGTAGTAGAAAATGGA
JMFF013J07+                                                       AGTAGTAGAAAATGGA
                      ____________________________________________________________
consensus             CTCGTGCTTTTGCCACCCACCTGTGTCCGCCTTGGAATGGGACCAGTAGTAGAAAATGGA
 
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rJMFF013J07-          GGCAATCATTGAGAGTAGCGTGAGTGCTGCTCCCGCAGCAAACACACCTTTACGAAGCGT
rJMFF009G04+          GGCAATCATTGAGAGTAGCGTGAGTGCTGCTCCCGCAGCAAACACACCTTTACGAAGCGT
JMFF009G04-           GGCAATCATTGAGAGTAGCGTGAGTGCTGCTCCCGCAGCAAACACACCTTTACGAAGCGT
rJMFF020O08-          GGCAATCATTGAGAGTAGCGTGAGTGCTGCTCCCGCAGCAAACACACCTTTACGAAGCGT
rJMFF024O20-          GGCAATCATTGAGAGTAGCGTGAGTGCTGCTCCCGCAGCAAACACACCTTTACGAAGCGT
rJMFF018D08-          GGCAATCATTGAGAGTAGCGTGAGTGCTGCTCCCGCAGCAAACACACCTTTACGAAGCGT
JMFN016D11+           GGCAATCATTGAGAGTAGCGTGAGTGCTGCTCCCGCAGCAAACACACCTTTACGAAGCGT
JMFF013J07+           GGCAATCATTGAGAGTAGCGTGAGTGCTGCTCCCGCAGCAAACACACCTTTACGAAGCGT
JMFF024O20+                                                                      T
JMFF018D08+                                                              ACGAAGCGT
JMFF020O08+                                                                   GCGT
                      ____________________________________________________________
consensus             GGCAATCATTGAGAGTAGCGTGAGTGCTGCTCCCGCAGCAAACACACCTTTACGAAGCGT
 
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rJMFF013J07-          GGCACATGACAAGTGGTCAACACGGAAAAATCCCCGGTATTTTGTGTGGTATGCATTCCT
rJMFF009G04+          GGCACATGACAAGTGGTCAACACGGAAAAATCCCCGGTATTTTGTGTGGTATGCATTCCT
JMFF009G04-           GGCACATGACAAGTGGTCAACACGGAAAAATCCCCGGTATTTTGTGTGGTATGCATTCCT
rJMFF020O08-          GGCACATGACAAGTGGTCAACACGGAAAAATCCCCGGTATTTTGTGTGGTATGCATTCCT
rJMFF024O20-          GGCACATGACAAGTGGTCAACACGGAAAAATCCCCGGTATTTTGTGTGGTATGCATTCCT
rJMFF018D08-          GGCACATGACAAGTGGTCAACACGGAAAAATCCCCGGTATTTTGTGTGGTATGCATTCCT
JMFN016D11+           GGCACATGACAAGTGGTCAACACGGAAAAATCCCCGGTATTTTGTGTGGTATGCATTCCT
JMFF013J07+           GGCACATGACAAGTGGTCAACACGGAAAAATCCCCGGTATTTTGTGTGGTATGCATTCCT
JMFF024O20+           GGCACATGACAAGTGGTCAACACGGAAAAATCCCCGGTATTTTGTGTGGTATGCATTCCT
JMFF018D08+           GGCACATGACAAGTGGTCAACACGGAAAAATCCCCGGTATTTTGTGTGGTATGCATTCCT
JMFF020O08+           GGCACATGACAAGTGGTCAACACGGAAAAATCCCCGGTATTTTGTGTGGTATGCATTCCT
                      ____________________________________________________________
consensus             GGCACATGACAAGTGGTCAACACGGAAAAATCCCCGGTATTTTGTGTGGTATGCATTCCT
 
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rJMFF013J07-          CGCTGATCCTGCCAATAAGCAAGCCTCTGCCCCCAAAAAGCTCACCAAAGAGAAGATGAA
rJMFF009G04+          CGCTGATCCTGCCAATAAGCAAGCCTCTGCCCCCAAAAAGCTCACC              
JMFF009G04-           CGCTGATCCTGCCAATAAGCAAGCCTCTGCCCCCAAAAAGCTCACC              
rJMFF020O08-          CGCTGATCCTGCCAATAAGCAAGCCTCTGCCCCCAAAAAGCTCACCAAAGAGAAGATGAA
rJMFF024O20-          CGCTGATCCTGCCAATAAGCAAGCCTCTGCCCCCAAAAAGCTCACCAAAGAGAAGATGAA
rJMFF018D08-          CGCTGATCCTGCCAATAAGCAAGCCTCTGCCCCCAAAAAGCTCACCAAAGAGAAGATGAA
JMFN016D11+           CGCTGATACTGCCAATAAGCAAGCCTCTGCCCCCAAAAAGCTCACCAAAGAGAAGATGAA
JMFF013J07+           CGCTGATCCTGCCAATAAGCAAGCCTCTGCCCCCAAAAAGCTCACCAAAGAGAAGATGAA
JMFF024O20+           CGCTGATCCTGCCAATAAGCAAGCCTCTGCCCCCAAAAAGCTCACCAAAGAGAAGATGAA
JMFF018D08+           CGCTGATCCTGCCAATAAGCAAGCCTCTGCCCCCAAAAAGCTCACCAAAGAGAAGATGAA
JMFF020O08+           CGCTGATCCTGCCAATAAGCAAGCCTCTGCCCCCAAAAAGCTCACCAAAGAGAAGATGAA
                      ____________________________________________________________
consensus             CGCTGATCCTGCCAATAAGCAAGCCTCTGCCCCCAAAAAGCTCACCAAAGAGAAGATGAA
 
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rJMFF013J07-          GAAGAAAATAGCACAAGTGGTAGATTTTCCACCCATCATCCCTCTCCCGCAACACAGGCA
rJMFF020O08-          GAAGAAAATAGCACAAGTGGTAGATTTTCCACCCATCATCCCTCTCCCGCAACACAGGCA
rJMFF024O20-          GAAGAAAATAGCACAAGTGGTAGATTTTCCACCCATCATCCCTCTCCCGCAACACAGGCA
rJMFF018D08-          GAAGAAAATAGCACAAGTGGTAGATTTTCCACCCATCATCCCTCTCCCGCAACACAGGCA
JMFN016D11+           GAAGAAAATAGCACAAGTGGTAGATTTTCCACCCATCATCCCTCTCCCGCAACACAGGCA
JMFF013J07+           GAAGAAAATAGCACAAGTGGTAGATTTTCCACCCATCATCCCTCTCCCGCAACACAGGCA
JMFF024O20+           GAAGAAAATAGCACAAGTGGTAGATTTTCCACCCATCATCCCTCTCCCGCAACACAGGCA
JMFF018D08+           GAAGAAAATAGCACAAGTGGTAGATTTTCCACCCATCATCCCTCTCCCGCAACACAGGCA
JMFF020O08+           GAAGAAAATAGCACAAGTGGTAGATTTTCCACCCATCATCCCTCTCCCGCAACACAGGCA
                      ____________________________________________________________
consensus             GAAGAAAATAGCACAAGTGGTAGATTTTCCACCCATCATCCCTCTCCCGCAACACAGGCA
 
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rJMFF013J07-          CTTGGTAACGCAGTATAACACAGTTTGGCTAATGAGAAGCAGCCCAAACGCCGACAATCC
rJMFF020O08-          CTTGGTAACGCAGTATAACACAGTTTGGCTAATGAGAAGCAGCCCAAACGCCGACAATCC
rJMFF024O20-          CTTGGTAACGCAGTATAACACAGTTTGGCTAATGAGAAGCAGCCCAAACGCCGACAATCC
rJMFF018D08-          CTTGGTAACGCAGTATAACACAGTTTGGCTAATGAGAAGCAGCCCAAACGCCGACAATCC
JMFN016D11+           CTTGGTAACGCAGTATAACACAGTTTGGCTAATGAGAAGCAGCCCAAACGCCGACAATCC
JMFF013J07+           CTTGGTAACGCAGTATAACACAGTTTGGCTAATGAGAAGCAGCCCAAACGCCGACAATCC
JMFF024O20+           CTTGGTAACGCAGTATAACACAGTTTGGCTAATGAGAAGCAGCCCAAACGCCGACAATCC
JMFF018D08+           CTTGGTAACGCAGTATAACACAGTTTGGCTAATGAGAAGCAGCCCAAACGCCGACAATCC
JMFF020O08+           CTTGGTAACGCAGTATAACACAGTTTGGCTAATGAGAAGCAGCCCAAACGCCGACAATCC
                      ____________________________________________________________
consensus             CTTGGTAACGCAGTATAACACAGTTTGGCTAATGAGAAGCAGCCCAAACGCCGACAATCC
 
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rJMFF013J07-          GTACGCCGTCGACGCGTCCGTTCCGTACACGCAGTACGTCCTCTCATCGTACTCATCTGG
rJMFF020O08-          GTACGCCGTCGACGCGTCCGTTCCGTACACGCAGTACGTCCTCTCATCGTACTCATCTGG
rJMFF024O20-          GTACGCCGTCGACGCGTCCGTTCCGTACACGCAGTACGTCCTCTCATCGTACTCATCTGG
rJMFF018D08-          GTACGCCGTCGACGCGTCCGTTCCGTACACGCAGTACGTCCTCTCATCGTACTCATCTGG
JMFN016D11+           GTACGCCGTCGACGCGTCCGTTCCGTACACGCAGTACGTCCTCTCATCGTACTCATCTGG
JMFF013J07+           GTACGCCGTCGACGCGTCCGTTCCGTACACGCAGTACGTCCTCTCATCGTACTCATCTGG
JMFF024O20+           GTACGCCGTCGACGCGTCCGTTCCGTACACGCAGTACGTCCTCTCATCGTACTCATCTGG
JMFF018D08+           GTACGCCGTCGACGCGTCCGTTCCGTACACGCAGTACGTCCTCTCATCGTACTCATCTGG
JMFF020O08+           GTACGCCGTCGACGCGTCCGTTCCGTACACGCAGTACGTCCTCTCATCGTACTCATCTGG
                      ____________________________________________________________
consensus             GTACGCCGTCGACGCGTCCGTTCCGTACACGCAGTACGTCCTCTCATCGTACTCATCTGG
 
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rJMFF013J07-          C                                                           
rJMFF020O08-          CACNAACTTTCGCTGTGCTACGGCGGCGCTCGGCACCAACGGC                 
rJMFF024O20-          CAC-AACTTTCGCTGTGCTACGGCGGCGCTCGGCACCAACGGCGAGAA            
rJMFF018D08-          CAC-AACTTTCGCTGTGCTACGGCGGCGCTCGGCACCAACGGCGAGAACGAAGGCGATGA
JMFN016D11+           CAC-AACTTTCGCTGTGCTACGGCGGCGCTCGGCACCAACGGCGAGAACGAAGGCGATGA
JMFF013J07+           CAC-AACTTTCGCTGTGCTACGGCGGCGCTCGGCACCAACGGCGAGAACGAAGGCGATGA
JMFF024O20+           CAC-AACTTTCGCTGTGCTACGGCGGCGCTCGGCACCAACGGCGAGAACGAAGGCGATGA
JMFF018D08+           CAC-AACTTTCGCTGTGCTACGGCGGCGCTCGGCACCAACGGCGAGAACGAAGGCGATGA
JMFF020O08+           CAC-AACTTTCGCTGTGCTACGGCGGCGCTCGGCACCAACGGCGAGAACGAAGGCGATGA
                      ____________________________________________________________
consensus             CAC-AACTTTCGCTGTGCTACGGCGGCGCTCGGCACCAACGGCGAGAACGAAGGCGATGA
 
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rJMFF018D08-          GGTGAAAGGAGATGAGTAAGACTAGAAGAGGTATGGAGAGCGCCATTAATGGCCAAGTAT
JMFN016D11+           GGTGAAAGGAGATGAGTAAGACTAGAAGAGGTATGGAGAGCGCCATTAATGGCCAAGTAT
JMFF013J07+           GGTGAAAGGAGATGAGTAAGACTAGAAGAGGTATGGAGAGCGCCATTAATGGCCAAGTAT
JMFF024O20+           GGTGAAAGGAGATGAGTAAGACTAGAAGAGGTATGGAGAGCGCCATTAATGGCCAAGTAT
JMFF018D08+           GGTGAAAGGAGATGAGTAAGACTAGAAGAGGTATGGAGAGCGCCATTAATGGCCAAGTAT
JMFF020O08+           GGTGAAAGGAGATGAGTAAGACTAGAAGAGGTATGGAGAGCGCCATTAATGGCCAAGTAT
                      ____________________________________________________________
consensus             GGTGAAAGGAGATGAGTAAGACTAGAAGAGGTATGGAGAGCGCCATTAATGGCCAAGTAT
 
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rJMFF018D08-          GCAGCTTTGTTGATCTGCTTTTCTTCTTCGATTTGGG                       
JMFN016D11+           GCAGCTTTGTTGATCTGCTTTTCTTCTTCGATTTGGGAATTT                  
JMFF013J07+           GCAGCTTTGTTGATCTGCTTTTCTTCTTCGATTTGGGAATTTTGTTGACACTAAAACACA
JMFF024O20+           GCAGCTTTGTTGATCTGCTTTTCTTCTTCGATTTGGGAATTTTGTTGACACTAAAACACA
JMFF018D08+           GCAGCTTTGTTGATCTGCTTTTCTTCTTCGATTTGGGAATTTTGTTGACACTAAAACACA
JMFF020O08+           GCAGCTTTGTTGATCTGCTTTTCTTCTTCGATTTGGGAATTTTGTTGACACTAAAACACA
                      ____________________________________________________________
consensus             GCAGCTTTGTTGATCTGCTTTTCTTCTTCGATTTGGGAATTTTGTTGACACTAAAACACA
 
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JMFF013J07+           GTAGAGTAGAGGAGCACAGCTTAGCTTTGCTTTGGAGCTTTGGAGCTTTGGCTTTATTT 
JMFF024O20+           GTAGAGTAGAGGAGCACAGCTTAGCTTTGCTTTGGAGCTTTGGAGCTTTGGCTTTATTT 
JMFF018D08+           GTAGAGTAGAGGAGCACAGCTTAGCTTTGCTTTGGAGCTTTGGAGCTTTGGCTTTATTT 
JMFF020O08+           GTAGAGTAGAGGAGCACAGCTTAGCTTTGCTTTGGAGCTTTGGAGCTTTGGCTTTATTTT
                      ____________________________________________________________
consensus             GTAGAGTAGAGGAGCACAGCTTAGCTTTGCTTTGGAGCTTTGGAGCTTTGGCTTTATTTT