Contig 000110:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF026A10+                                                            TATATATATAT
                      ____________________________________________________________
consensus                                                              TATATATATAT
 
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JMSF026A10+           CCAAACAACTATGCATATGAGCATATCAAGATNTAACATAGCCACTTGACCACAGTCTCC
                      ____________________________________________________________
consensus             CCAAACAACTATGCATATGAGCATATCAAGATNTAACATAGCCACTTGACCACAGTCTCC
 
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JMSF026A10+           ATTTCAAACAATTTCCCCCCATTCCTCCCCCAATTTATTTACCCTTTTGAGATCAAGTCC
                      ____________________________________________________________
consensus             ATTTCAAACAATTTCCCCCCATTCCTCCCCCAATTTATTTACCCTTTTGAGATCAAGTCC
 
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JMSF026A10+           AACAATTTACACAAAAATGCCTCTCTAATCTTCCTATCTATCCAACACAAACATAAAACC
                      ____________________________________________________________
consensus             AACAATTTACACAAAAATGCCTCTCTAATCTTCCTATCTATCCAACACAAACATAAAACC
 
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JMSF026A10+           AACAACCTAAAGCAGCAAAGGCTATATAATCAAAGGTAGAGGAAAAGCATAACCAAACTA
                      ____________________________________________________________
consensus             AACAACCTAAAGCAGCAAAGGCTATATAATCAAAGGTAGAGGAAAAGCATAACCAAACTA
 
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JMFS166A01+                          AGAGGAACCCAGCTGCTAAGATCTGATAAAAAGCAATCACTTTCC
JMSF026A10+           ACTTTCCAATCTTACAGAGGAACCCAGCTGCTAAGATCTGATAAAAAGCAATCACTTTCC
JMFF012G10+                          AGAGGAACCCAGCTGCTAAGATCTGATAAAAAGCAATCACTTTCC
JMFF020N09+                          AGAGGAACCCAGCTGCTAAGATCTGATAAAAAGCAATCACTTTCC
                      ____________________________________________________________
consensus             ACTTTCCAATCTTACAGAGGAACCCAGCTGCTAAGATCTGATAAAAAGCAATCACTTTCC
 
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JMFS166A01+           AGCACCCTTCATCAATTCCACCGAAACAGCGAGACCCACCACGGAATCTTGACCTCTGCA
JMSF026A10+           AGCACCCTTCATCAATTCCACCGAAACAGCGAGACCCACCACGGAATCTTGACCTCTGCA
JMFF012G10+           AGCACCCTTCATCAATTCCACCGAAACAGCGAGACCCACCACGGAATCTTGACCTCTGCA
JMFF020N09+           AGCACCCTTCATCAATTCCACCGAAACAGCGAGACCCACCACGGAATCTTGACCTCTGCA
                      ____________________________________________________________
consensus             AGCACCCTTCATCAATTCCACCGAAACAGCGAGACCCACCACGGAATCTTGACCTCTGCA
 
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JMFS166A01+           CGCCCCAAATCAGAGTGAAGAAGCCAATACGACGAAAAAGCTTCCAACTTTGCTGTCAAA
JMSF026A10+           CGCCCCAAATCAGAGTGAAGAAGCCAATACGACGAAAAAGCTTCCAACTTTGCTGTCAAA
JMFF012G10+           CGCCCCAAATCAGAGTGAAGAAGCCAATACGACGAAAAAGCTTCCAACTTTGCTGTCAAA
JMFF020N09+           CGCCCCAAATCAGAGTGAAGAAGCCAATACGACGAAAAAGCTTCCAACTTTGCTGTCAAA
                      ____________________________________________________________
consensus             CGCCCCAAATCAGAGTGAAGAAGCCAATACGACGAAAAAGCTTCCAACTTTGCTGTCAAA
 
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JMFS166A01+           AACAGGCAACCCAGACGGCCGTCTGCTCCGCCGTGCCGCAAAACCGGCCCCCGTAATGGG
JMSF026A10+           AACAGGCAACCCAGACGGCCGTCTGCTCCGCCGTGCCGCAAAACCGGCCCCCGTAATGGG
JMFF012G10+           AACAGGCAACCCAGACGGCCGTCTGCTCCGCCGTGCCGCAAAACCGGCCCCCGTAATGGG
JMFF020N09+           AACAGGCAACCCAGACGGCCGTCTGCTCCGCCGTGCCGCAAAACCGGCCCCCGTAATGGG
                      ____________________________________________________________
consensus             AACAGGCAACCCAGACGGCCGTCTGCTCCGCCGTGCCGCAAAACCGGCCCCCGTAATGGG
 
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JMFS166A01+           AACACAAGCTCGACGCTAGTCAACAACGATGCCCACACTGTTATTGATGTGAGCCCAGCT
JMSF026A10+           AACACAAGCTCGACGCTAGTCAACAACGATGCCCACACTGTTATTGATGTGAGCCCAGCT
JMFF012G10+           AACACAAGCTCGACGCTAGTCAACAAAGATGCCCACACTGTTATTGATGTGAGCCCAGCT
JMFF020N09+           AACACAAGCTCGACGCTAGTCAACAAAGATGCCCACACTGTTATTGATGTGAGCCCAGCT
                      ____________________________________________________________
consensus             AACACAAGCTCGACGCTAGTCAACAACGATGCCCACACTGTTATTGATGTGAGCCCAGCT
 
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JMFS166A01+           AGGAGCTAGTCGTACCCTTTTGCTCGTGAGATTCTTGACTCATTGCTCCGGAAGAAAAGC
JMSF026A10+           AGGAGCTAGTCGTACCCTTTTGCTCGTGAGATTCTTGACTCATTGCTCCGGAAGAAAAGC
JMFF012G10+           AGGAGCTAGTCGTACCCTTTTGCTCGTGAGATTCTTGACTCATTGCTCCGGAAGAAAAGC
JMFF020N09+           AGGAGCTAGTCGTACCCTTTTGCTCGTGAGATTCTTGACTCATTGCTCCGGAAGAAAAGC
                      ____________________________________________________________
consensus             AGGAGCTAGTCGTACCCTTTTGCTCGTGAGATTCTTGACTCATTGCTCCGGAAGAAAAGC
 
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JMFS166A01+           GCCCATTTGCTTCCCCCTCTAA                                      
JMSF026A10+           GCCCATTTGCTTCCCCCTCTAAATCTCCTATTCCCAGTCTTTTTTTGCTTTCTTCTC   
JMFF012G10+           GCCCATTTGCTTCCCCCTCTAAATCTCCTATTCCCAGTCTTTTTTTGCTTTCTTCTC   
JMFF020N09+           GCCCATTTGCTTCCCCCTCTAAATCTCCTATTCCCAGTCTTTTTTTGCTTTCTTCTCAGC
                      ____________________________________________________________
consensus             GCCCATTTGCTTCCCCCTCTAAATCTCCTATTCCCAGTCTTTTTTTGCTTTCTTCTCAGC