Contig 000107:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020G18Sequence574000107 (2)emb|CAN82744.1|5e-22hypothetical protein VITISV_027510 [Vitis vinifera]769021258ref|XP_009791315.1|3e-40PREDICTED: F-box protein At5g49610-like isoform X1 [Nicotiana sylvestris]
JMSF011K01Sequence475000107 (2)ref|XP_009791315.1|1e-50PREDICTED: F-box protein At5g49610-like isoform X1 [Nicotiana sylvestris]770016042ref|XP_009597626.1|6e-85PREDICTED: F-box protein At5g49610-like isoform X2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF011K01+                                                   TGGCAACACAACAGTCCATT
                      ____________________________________________________________
consensus                                                     TGGCAACACAACAGTCCATT
 
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JMSF011K01+           TGATGAGGCCCTAATGACANCAGGCTCTGGCAGAAAACTCAAAGATGGATCTGGTACACC
JMFF020G18+                                     CTGGCAGAAAGCTCAAAGAGGGATCTGGTACACC
                      ____________________________________________________________
consensus             TGATGAGGCCCTAATGACANCAGGCTCTGGCAGAAAGCTCAAAGATGGATCTGGTACACC
 
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JMSF011K01+           AGAAGATTTTGGATGAATTGGTATGAAGACGGGAGCATTTCCAGG---AGTCTGACAAAA
JMFF020G18+           AGCAGATGCTGGATGAATTGGTATGAAGACAGGAGGAGTTTCAGGACTAGTCTGACAAAA
                      ____________________________________________________________
consensus             AGCAGATTTTGGATGAATTGGTATGAAGACGGGAGGATTTTCAGGACTAGTCTGACAAAA
 
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JMSF011K01+           AAGGCCTGATATGCCACGACAACAAAGTGATTGATTATGGTGGAAGAATGGTGCTGAAAT
JMFF020G18+           AAGGCCTGTTGTGTCGGTGAAACGAAGTGATTGATTAAAGTGGAAGGTTGGTGTTAATAT
                      ____________________________________________________________
consensus             AAGGCCTGTTGTGTCGGTGCAACGAAGTGATTGATTATGGTGGAAGGTTGGTGTTGATAT
 
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JMSF011K01+           CTGGAGCTTCCAGTCTCGACAAACAGCCAGGAATCTGAACAGTGATTTAGCAGGAAGGAA
JMFF020G18+           ATGGCGCTTCCAGAGATGACAAACAGCCATGAATCTGAACAGTGATTTAGCAGGAAGGAA
                      ____________________________________________________________
consensus             CTGGCGCTTCCAGTGTTGACAAACAGCCATGAATCTGAACAGTGATTTAGCAGGAAGGAA
 
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JMSF011K01+           TGGAAGAGCTTGTTCTCTAATGATATCCTTAAGATC                        
JMFF020G18+           GTCAAGGGCTTCTTCTCTAATGATATCATTAAGATCGTCCTCCTCACTGTTTGATGTAGA
                      ____________________________________________________________
consensus             TTGAAGGGCTTGTTCTCTAATGATATCCTTAAGATCGTCCTCCTCACTGTTTGATGTAGA
 
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JMFF020G18+           CGCAAGGTTTCGTCCTTGATCCATTGTATCTCTACAGATTGATGGGCAGACAACACCTGG
                      ____________________________________________________________
consensus             CGCAAGGTTTCGTCCTTGATCCATTGTATCTCTACAGATTGATGGGCAGACAACACCTGG
 
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JMFF020G18+           AAAACGGAACAAAACCAAAACCTAGGCGGAGAGAAGAGAAGAACAGTGGCGGTGGCGACG
                      ____________________________________________________________
consensus             AAAACGGAACAAAACCAAAACCTAGGCGGAGAGAAGAGAAGAACAGTGGCGGTGGCGACG
 
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JMFF020G18+           GTGGTAGCAAGGACTGGCGCAGGCGTCGTTGGTGGCTGATGAGAGAGGCGGTGGAGTCCT
                      ____________________________________________________________
consensus             GTGGTAGCAAGGACTGGCGCAGGCGTCGTTGGTGGCTGATGAGAGAGGCGGTGGAGTCCT
 
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JMFF020G18+           TGGTGTCGCGGTGTTGGCGGCGGAGAGGAGAGGTGAGGAGAGAGCGATGAGGAAGAGAGT
                      ____________________________________________________________
consensus             TGGTGTCGCGGTGTTGGCGGCGGAGAGGAGAGGTGAGGAGAGAGCGATGAGGAAGAGAGT
 
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JMFF020G18+           TGAGCGTCAGATCTGGTTTTTATGACTGATCGATCTATTTTGTTTATTTTGGTCTCAGAT
                      ____________________________________________________________
consensus             TGAGCGTCAGATCTGGTTTTTATGACTGATCGATCTATTTTGTTTATTTTGGTCTCAGAT