Contig 000106:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020C09Sequence618000106 (14)gb|KDP22396.1|4e-79hypothetical protein JCGZ_26227 [Jatropha curcas]579000106 (14)gb|KDP22396.1|2e-79hypothetical protein JCGZ_26227 [Jatropha curcas]
JMFN002D05Sequence553000106 (14)gb|KDP22396.1|3e-79hypothetical protein JCGZ_26227 [Jatropha curcas]
JMFN004C11Sequence592000106 (14)gb|KDP22396.1|3e-79hypothetical protein JCGZ_26227 [Jatropha curcas]
JMFN010L12Sequence570000106 (14)gb|KDP22396.1|4e-79hypothetical protein JCGZ_26227 [Jatropha curcas]
JMFN013G13Sequence549000106 (14)gb|KDP22396.1|2e-79hypothetical protein JCGZ_26227 [Jatropha curcas]
JMFN013H08Sequence581000106 (14)gb|KDP22396.1|3e-79hypothetical protein JCGZ_26227 [Jatropha curcas]
JMFN013K24Sequence570000106 (14)gb|KDP22396.1|4e-79hypothetical protein JCGZ_26227 [Jatropha curcas]
JMFN032C18Sequence602000106 (14)gb|KDP22396.1|3e-79hypothetical protein JCGZ_26227 [Jatropha curcas]
JMFN032M02Sequence577000106 (14)gb|KDP22396.1|3e-79hypothetical protein JCGZ_26227 [Jatropha curcas]
JMFN033N07Sequence594000106 (14)gb|KDP22396.1|3e-79hypothetical protein JCGZ_26227 [Jatropha curcas]
JMFN045E21Sequence577000106 (14)gb|KDP22396.1|3e-79hypothetical protein JCGZ_26227 [Jatropha curcas]
JMSF049P01Sequence611000106 (14)gb|KDP22396.1|4e-79hypothetical protein JCGZ_26227 [Jatropha curcas]561000106 (14)gb|KDP22396.1|2e-79hypothetical protein JCGZ_26227 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN013H08+ AATTCAA
JMFN032M02+ AATTCAA
JMFN045E21+ AATTCAA
JMFN010L12+ AATTCAA
JMFN013K24+ AATTCAA
JMFN013G13+ AATTCAA
JMFN004C11+ AATTCAA
JMFN032C18+ AATTCAA
                      ____________________________________________________________
consensus AATTCAA
 
. : . : . : . : . : . :
JMFN013H08+ ACTCAAATAAGATTAATAACAAAAACTATTGTCACATACTGAGTATTTGTTAACTTCAAA
JMFN032M02+ ACTCAAATAAGATTAATAACAAAAACTATTGTCACATACTGAGTATTTGTTAACTTCAAA
JMFN045E21+ ACTCAAATAAGATTAATAACAAAAACTATTGTCACATACTGAGTATTTGTTAACTTCAAA
JMFN010L12+ ACTCAAATAAGATTAATAACAAAAACTATTGTCACATACTGAGTATTTGTTAACTTCAAA
JMFN013K24+ ACTCAAATAAGATTAATAACAAAAACTATTGTCACATACTGAGTATTTGTTAACTTCAAA
JMFN002D05+ CAAAAACTATTGTCACATACTGAGTATTTGTTAACTTCAAA
JMFN013G13+ ACTCAAATAAGATTAATAACAAAAACTATTGTCACATACTGAGTATTTGTTAACTTCAAA
rJMSF049P01- GTATTTGTTAACTTCAAA
JMFN004C11+ ACTCAAATAAGATTAATAACAAAAACTATTGTCACATACTGAGTATTTGTTAACTTCAAA
JMFN032C18+ ACTCAAATAAGATTAATAACAAAAACTATTGTCACATACTGAGTATTTGTTAACTTCAAA
JMFN033N07+ CTCAAATAAGATTAATAACAAAAACTATTGTCACATACTGAGTATTTGTTAACTTCAAA
rJMFF020C09- AAAACTATTGTCACATACTGAGTATTTGTTAACTTCAAA
                      ____________________________________________________________
consensus ACTCAAATAAGATTAATAACAAAAACTATTGTCACATACTGAGTATTTGTTAACTTCAAA
 
. : . : . : . : . : . :
JMFN013H08+ AATATAATTTGAAAGCTGATGAATCTATCCTGTCAACAATATTTAAACAGATAATAACTT
JMFN032M02+ AATATAATTTGAAAGCTGATGAATCTATCCTGTCAACAATATTTAAACAGATAATAACTT
JMFN045E21+ AATATAATTTGAAAGCTGATGAATCTATCCTGTCAACAATATTTAAACAGATAATAACTT
JMFN010L12+ AATATAATTTGAAAGCTGATGAATCTATCCTGTCAACAATATTTAAACAGATAATAACTT
JMFN013K24+ AATATAATTTGAAAGCTGATGAATCTATCCTGTCAACAATATTTAAACAGATAATAACTT
JMFN002D05+ AATATAATTTGAAAGCTGATGAATCTATCCTGTCAACAATATTTAAACAGATAATAACTT
JMFN013G13+ AATATAATTTGAAAGCTGATGAATCTATCCTGTCAACAATATTTAAACAGATAATAACTT
rJMSF049P01- AATATAATTTGAAAGCTGATGAATCTATCCTGTCAACAATATTTAAACAGATAATAACTT
JMFN004C11+ AATATAATTTGAAAGCTGATGAATCTATCCTGTCAACAATATTTAAACAGATAATAACTT
JMFN032C18+ AATATAATTTGAAAGCTGATGAATCTATCCTGTCAACAATATTTAAACAGATAATAACTT
JMFN033N07+ AATATAATTTGAAAGCTGATGAATCTATCCTGTCAACAATATTTAAACAGATAATAACTT
rJMFF020C09- AATATAATTTGAAAGCTGATGAATCTATCCTGTCAACAATATTTAAACAGATAATAACTT
                      ____________________________________________________________
consensus AATATAATTTGAAAGCTGATGAATCTATCCTGTCAACAATATTTAAACAGATAATAACTT
 
. : . : . : . : . : . :
JMFN013H08+ CAAAAACACAACTCCGCTAGTGCTTTATAGTTCAAGAATCAGCAATGGTAACCTCAACCT
JMFN032M02+ CAAAAACACAACTCCGCTAGTGCTTTATAGTTCAAGAATCAGCAATGGTAACCTCAACCT
JMFN045E21+ CAAAAACACAACTCCGCTAGTGCTTTATAGTTCAAGAATCAGCAATGGTAACCTCAACCT
JMFN010L12+ CAAAAACACAACTCCGCTAGTGCTTTATAGTTCAAGAATCAGCAATGGTAACCTCAACCT
JMFN013K24+ CAAAAACACAACTCCGCTAGTGCTTTATAGTTCAAGAATCAGCAATGGTAACCTCAACCT
JMFN002D05+ CAAAAACACAACTCCGCTTGTGCTTTATAGTTCAAGAATCAGCAATGGTAACCTCAACCT
JMFN013G13+ CAAAAACACAACTCCGCTAGTGCTTTATAGTTCAAGAATCAGCAATGGTAACCTCAACCT
rJMSF049P01- CAAAAACACAACTCCGCTAGTGCTTTATAGTTCAAGAATCAGCAATGGTAACCTCAACCT
JMSF049P01+ AAGAATCAGCAATGGTAACCTCAACCT
JMFN004C11+ CAAAAACACAACTCCGCTAGTGCTTTATAGTTCAAGAATCAGCAATGGTAACCTCAACCT
JMFN032C18+ CAAAAACACAACTCCGCTAGTGCTTTATAGTTCAAGAATCAGCAATGGTAACCTCAACCT
JMFN033N07+ CAAAAACACAACTCCGCTAGTGCTTTATAGTTCAAGAATCAGCAATGGTAACCTCAACCT
rJMFF020C09- CAAAAACACAACTCCGCTAGTGCTTTATAGTTCAAGAATCAGCAATGGTAACCTCAACCT
JMFF020C09+ AAGAATCAGCAATGGTAACCTCAACCT
                      ____________________________________________________________
consensus CAAAAACACAACTCCGCTAGTGCTTTATAGTTCAAGAATCAGCAATGGTAACCTCAACCT
 
. : . : . : . : . : . :
JMFN013H08+ CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
JMFN032M02+ CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
JMFN045E21+ CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
JMFN010L12+ CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
JMFN013K24+ CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
JMFN002D05+ CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
JMFN013G13+ CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
rJMSF049P01- CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
JMSF049P01+ CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
JMFN004C11+ CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
JMFN032C18+ CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
JMFN033N07+ CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
rJMFF020C09- CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
JMFF020C09+ CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
                      ____________________________________________________________
consensus CCACCCCAGGCTCAATTGTAATTGAAGTGATCTGCTTCACCACTTCGGGAGAGCTAAATA
 
. : . : . : . : . : . :
JMFN013H08+ GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
JMFN032M02+ GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
JMFN045E21+ GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
JMFN010L12+ GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
JMFN013K24+ GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
JMFN002D05+ GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
JMFN013G13+ GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
rJMSF049P01- GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
JMSF049P01+ GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
JMFN004C11+ GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
JMFN032C18+ GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
JMFN033N07+ GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
rJMFF020C09- GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
JMFF020C09+ GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
                      ____________________________________________________________
consensus GGTCAATCACACGCTTGTGGACCCGAAGCTCGAACCTATCCCAAGTGTTGGTACCTTCTC
 
. : . : . : . : . : . :
JMFN013H08+ CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
JMFN032M02+ CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
JMFN045E21+ CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
JMFN010L12+ CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
JMFN013K24+ CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
JMFN002D05+ CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
JMFN013G13+ CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
rJMSF049P01- CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
JMSF049P01+ CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
JMFN004C11+ CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
JMFN032C18+ CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
JMFN033N07+ CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
rJMFF020C09- CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
JMFF020C09+ CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
                      ____________________________________________________________
consensus CACAGGGAGACTTTCTAGTAGTAATATGAAGAACCTTGGTAGGCATCCTAACCGGTCCCT
 
. : . : . : . : . : . :
JMFN013H08+ TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
JMFN032M02+ TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
JMFN045E21+ TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
JMFN010L12+ TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
JMFN013K24+ TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
JMFN002D05+ TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
JMFN013G13+ TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
rJMSF049P01- TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
JMSF049P01+ TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
JMFN004C11+ TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
JMFN032C18+ TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
JMFN033N07+ TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
rJMFF020C09- TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
JMFF020C09+ TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
                      ____________________________________________________________
consensus TGACCCTGAGTCTCTTGTCCTTGGCACCCCGGACCAAGTCAGCACAAACTTTCTCGAGAT
 
. : . : . : . : . : . :
JMFN013H08+ TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
JMFN032M02+ TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
JMFN045E21+ TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
JMFN010L12+ TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
JMFN013K24+ TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
JMFN002D05+ TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
JMFN013G13+ TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
rJMSF049P01- TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
JMSF049P01+ TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
JMFN004C11+ TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
JMFN032C18+ TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
JMFN033N07+ TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
rJMFF020C09- TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
JMFF020C09+ TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
                      ____________________________________________________________
consensus TCTTAACGTTTTTGGAAGAGAGAGTGATTCTGATCTTGTGAATCTGTTCCTGGGGCTCCT
 
. : . : . : . : . : . :
JMFN013H08+ CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
JMFN032M02+ CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
JMFN045E21+ CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
JMFN010L12+ CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
JMFN013K24+ CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
JMFN002D05+ CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
JMFN013G13+ CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
rJMSF049P01- CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
JMSF049P01+ CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
JMFN004C11+ CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
JMFN032C18+ CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
JMFN033N07+ CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
rJMFF020C09- CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
JMFF020C09+ CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
                      ____________________________________________________________
consensus CCAGCCCAGCCTTTGCCGGCTTCACCGCTTGATACGCCATTTTTTCACTTCGCTTTCGGA
 
. : . : . : . : . : . :
JMFN013H08+ GAGGCGGAGAGCGAACTGGCGAAGAAGTAAGGGA
JMFN032M02+ GAGGCGGAGAGCGAACTGGCGAAGAAGTAA
JMFN045E21+ GAGGCGGAGAGCGAACTGGCGAAGAAGTAA
JMFN010L12+ GAGGCGGAGAGCGAACTGGCGAA
JMFN013K24+ GAGGCGGAGAGCGAACTGGCGAA
JMFN002D05+ GAGGCGGAGAGCGAACTGGCGAAGAAGTAAGG
JMFN013G13+ GA
rJMSF049P01- GAGGCGGAGAGCGAACTGGCGAAGAAGTAAGGGAGATGCGGCT
JMSF049P01+ GAGGCGGAGAGCGAACTGGCGAAGAAGTAAGGGAGATGCGGCT
JMFN004C11+ GAGGCGGAGAGCGAACTGGCGAAGAAGTAAGGGAGATGCGGCTAA
JMFN032C18+ GAGGCGGAGAGCGAACTGGCGAAGAAGTAAGGGAGATGCGGCTAACTGGAAGAAG
JMFN033N07+ GAGGCGGAGAGCGAACTGGCGAAGAAGTAAGGGAGATGCGGCTAACTGGAAGAAG
rJMFF020C09- GAGGCGGAGAGCGAACTGGCGAAGAAGTAAGGGAGATGCGGCTAACTGGAAGAAG
JMFF020C09+ GAGGCGGAGAGCGAACTGGCGAAGAAGTAAGGGAGATGCGGCTAACTGGAAGAAGAAGAC
                      ____________________________________________________________
consensus GAGGCGGAGAGCGAACTGGCGAAGAAGTAAGGGAGATGCGGCTAACTGGAAGAAGAAGAC