Contig 000105:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019O15Sequence620000105 (3)ref|XP_009778932.1|1e-39PREDICTED: uncharacterized protein LOC104228202 isoform X1 [Nicotiana sylvestri695016959ref|XP_010325314.1|8e-29PREDICTED: uncharacterized protein LOC101260367 isoform X1 [Solanum lycopersicu
JMFS041G03Sequence546000105 (3)ref|XP_010325318.1|8e-27PREDICTED: uncharacterized protein LOC101260367 isoform X2 [Solanum lycopersicu
JMFS069B03Sequence642000105 (3)ref|XP_009622828.1|186PREDICTED: uncharacterized protein LOC104114154 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS069B03+                                                          TGAATGGATTATC
                      ____________________________________________________________
consensus                                                            TGAATGGATTATC
 
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JMFS069B03+           CATATTCAATGTCTTAGTTGGCAATTCCACCAGGAGCTGTGCAACTTCAGTTTCCTCACT
JMFF019O15+                                                   GCAACTTCAGTTTCCTCACT
                      ____________________________________________________________
consensus             CATATTCAATGTCTTAGTTGGCAATTCCACCAGGAGCTGTGCAACTTCAGTTTCCTCACT
 
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JMFS069B03+           ATCATTTCTACTGTTCTTATTCTTACACTTATCACAAGCAAACAGCTTCTCACTCTTGAC
JMFS041G03+                                                             CACTCTTGAC
JMFF019O15+           ATCATTTCTACTGTTCTTATTCTTACACTTATCACAAGCAAACAGCTTCTCACTCTTGAC
                      ____________________________________________________________
consensus             ATCATTTCTACTGTTCTTATTCTTACACTTATCACAAGCAAACAGCTTCTCACTCTTGAC
 
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JMFS069B03+           ATATCCCACACACCGCGTATGCACCCACACACCACAGTCATCACAATTCACCATCTCCTC
JMFS041G03+           ATATCCCACACACCGCGTATGCACCCACACACCACAGTCATCACAATTCACCATCTCCTC
JMFF019O15+           ATATCCCACACACCGCGTATGCACCCACACACCACAGTCATCACAATTCACCATCTCCTC
                      ____________________________________________________________
consensus             ATATCCCACACACCGCGTATGCACCCACACACCACAGTCATCACAATTCACCATCTCCTC
 
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JMFS069B03+           TCCATCGTCAAAATTCACCCCGCACACACAGTCCACAGTCCATGAACCATCCCCCCAGTC
JMFS041G03+           TCCATCGTCAAAATTCACTCCGCACACACAGTCCACAGTCCATGAACCATCCCCCCAGTC
JMFF019O15+           TCCATCGTCAAAATTCACCCCGCACACACAGTCCACAGTCCATGAACCATCCCCCCAGTC
                      ____________________________________________________________
consensus             TCCATCGTCAAAATTCACCCCGCACACACAGTCCACAGTCCATGAACCATCCCCCCAGTC
 
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JMFS069B03+           ATCCTGCGGATTTGGCATCGGCAGTCCATTCGATCGACTCTTCATTCTTCTACCTCCCTC
JMFS041G03+           ATCCTGCGGATTTGGCATCGGCAGTCCATTCGATCGACTCTTCATTCTTCTACCTCCCTC
JMFF019O15+           ATCCTGCGGATTTGGCATCGGCAGTCCATTCGATCGACTCTTCATTCTTCTACCTCCCTC
                      ____________________________________________________________
consensus             ATCCTGCGGATTTGGCATCGGCAGTCCATTCGATCGACTCTTCATTCTTCTACCTCCCTC
 
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JMFS069B03+           TCTCTATCTCTCTCTAACCCTAATCAAAACAAAATCCTAAACTGACCACGATTCTCCACG
JMFS041G03+           TCTCTATCTCTCTCTAACCGTAATCAAAACAAAATCCTAAACTGACCACGATTCTCCACG
JMFF019O15+           TCTCTATCTCTCTCTAACCCTAATCAAAACAAAATCCTAAACTGACCACGATTCTCCACG
                      ____________________________________________________________
consensus             TCTCTATCTCTCTCTAACCCTAATCAAAACAAAATCCTAAACTGACCACGATTCTCCACG
 
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JMFS069B03+           AATTGCTTAACCACAAGCTAACAATCCCTCCACTCTCACACGTCGGCATCATTTAACAGA
JMFS041G03+           AATTGTTTAACCACAAGCTAACAATCCCTCCACTCTCACACGTCGGCATCATTTAACAGA
JMFF019O15+           AATTGCTTAACCACAAGCTAACAATCCCTCCACTCTCACACGTCGGCATCATTTAACAGA
                      ____________________________________________________________
consensus             AATTGCTTAACCACAAGCTAACAATCCCTCCACTCTCACACGTCGGCATCATTTAACAGA
 
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JMFS069B03+           TTACAAAAAGAGCAACATAAAGCCATAGCTATGAAATTCTTCAATATTAAACTCACAAAA
JMFS041G03+           TTACAAAAAGAGCAACATAAAGCCATAGCTATGAAATTCTTCAATATTAAACTCACAAAA
JMFF019O15+           TTACAAAAAGAGCAACATAAAGCCATAGCTATGAAATTCTTCAATATTAAACTCACAAAA
                      ____________________________________________________________
consensus             TTACAAAAAGAGCAACATAAAGCCATAGCTATGAAATTCTTCAATATTAAACTCACAAAA
 
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JMFS069B03+           CAAGGAGTGTCGAGAATACAGTTTAAGGATGTGTACCGAAAGGCGAAATCTCGTCCCCGG
JMFS041G03+           CAAGGAGTGTCGAGAATACAGTTTAAGGATGTGTACCGAAAGGCGAAATCTCGTCCCCGG
JMFF019O15+           CAAGGAGTGTCGAGAATACAGTTTAAGGATGTGTACCGAAAGGCGAAATCTCGTCCCCGG
                      ____________________________________________________________
consensus             CAAGGAGTGTCGAGAATACAGTTTAAGGATGTGTACCGAAAGGCGAAATCTCGTCCCCGG
 
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JMFS069B03+           TCCCCGTGGCCCGTCGATGCTACGGCGAGGAAGCAAAATAAGACGGTGTGATAGAAGCGG
JMFS041G03+           TCCCCGTGGCCCGTCGATGCTACGGCGAGGAAGCAAAATAAGACGGTGTGATAGAAGCGG
JMFF019O15+           TCCCCGTGGCCCGTCGATGCTACGGCGAGGAAGCAAAATAAGACGGTGTGATAGAAGCGG
                      ____________________________________________________________
consensus             TCCCCGTGGCCCGTCGATGCTACGGCGAGGAAGCAAAATAAGACGGTGTGATAGAAGCGG
 
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JMFS069B03+           CTTGAAGGTCAGAATTCCGGCAGTGAGAA                               
JMFS041G03+           CTTGAAGGTCAGAATTCCGGCAGTGAGAAAGGCTAGGCGGCAAGCCAAGTTTG       
JMFF019O15+           CTTGAAGGTCAGAATTCCGGCAGTGAGAAAGGCTAGGCGGGAAGCCAAGTTTGTGACACT
                      ____________________________________________________________
consensus             CTTGAAGGTCAGAATTCCGGCAGTGAGAAAGGCTAGGCGGGAAGCCAAGTTTGTGACACT