Contig 000101:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019J12Sequence563000101 (3)ref|XP_006353341.1|2e-101PREDICTED: E3 ubiquitin-protein ligase XBAT33-like [Solanum tuberosum]791008212 (3)ref|XP_007038628.1|1e-35XB3 in isoform 3 [Theobroma cacao] ref|XP_007038629.1| XB3 in isoform 3 [Theobro
JMFF020B23Sequence627000101 (3)ref|XP_006353341.1|2e-117PREDICTED: E3 ubiquitin-protein ligase XBAT33-like [Solanum tuberosum]736008212 (3)ref|XP_007038628.1|5e-32XB3 in isoform 3 [Theobroma cacao] ref|XP_007038629.1| XB3 in isoform 3 [Theobro
JMSF036C11Sequence728000101 (3)ref|XP_006353341.1|1e-136PREDICTED: E3 ubiquitin-protein ligase XBAT33-like [Solanum tuberosum]741008212 (3)ref|XP_009780428.1|6e-40PREDICTED: E3 ubiquitin-protein ligase XBAT33 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF036C11+ CCACATGCAGCATAATGCAANGGAGTGCTTCCAGCTCCTATAAG
                      ____________________________________________________________
consensus CCACATGCAGCATAATGCAANGGAGTGCTTCCAGCTCCTATAAG
 
. : . : . : . : . : . :
JMSF036C11+ ATCCANTTGATGTTCCATAATGAAATGTAACAGCTGATACATTAGCATGAAGATCAAGCA
                      ____________________________________________________________
consensus ATCCANTTGATGTTCCATAATGAAATGTAACAGCTGATACATTAGCATGAAGATCAAGCA
 
. : . : . : . : . : . :
JMSF036C11+ GGAGCTGTACACATTCAAAATATCCATTCAATGCAGCCATATGAAGAGCAGTAATACCAC
JMFF020B23+ TGCAGCCATATGAAGAGCAGTAATACCAC
                      ____________________________________________________________
consensus GGAGCTGTACACATTCAAAATATCCATTCAATGCAGCCATATGAAGAGCAGTAATACCAC
 
. : . : . : . : . : . :
JMSF036C11+ CATCTGCAGACTTATTTACAAACTTTGCCAGAGCACCCTGATCGTGTTTGCTCTTTGAAT
JMFF020B23+ CATCTGCAGACTTATTTACAAACTTTGCCAGAGCACCCTGATCGTGTTTGCTCTTTGAAT
JMFF019J12+ CTGATCGTGTTTGCTCTTTGAAT
                      ____________________________________________________________
consensus CATCTGCAGACTTATTTACAAACTTTGCCAGAGCACCCTGATCGTGTTTGCTCTTTGAAT
 
. : . : . : . : . : . :
JMSF036C11+ GAGAACTTTCACTTCTGTCAGCAATTGTTTCAGCATGTACAGATTCAAAAGAGGAACTGG
JMFF020B23+ GAGAACTTTCACTTCTGTCAGCAATTGTTTCAGCATGTACAGATTCAAAAGAGGAACTGG
JMFF019J12+ GAGAACTTTCACTTCTGTCAGCAATTGTTTCAGCATGTACAGATTCAAAAGAGGAACTGG
                      ____________________________________________________________
consensus GAGAACTTTCACTTCTGTCAGCAATTGTTTCAGCATGTACAGATTCAAAAGAGGAACTGG
 
. : . : . : . : . : . :
JMSF036C11+ GAACAAAATCAGCCACCACAAGTCTTATGCACCTGACATGCCCATTCACTGCTGCAAAAT
JMFF020B23+ GAACAAAATCAGCCACCACAAGTCTTATGCACCTGACATGCCCATTCACTGCTGCAAAAT
JMFF019J12+ GAACAAAATCAGCCACCACAAGTCTTATGCACCTGACATGCCCATTCACTGCTGCAAAAT
                      ____________________________________________________________
consensus GAACAAAATCAGCCACCACAAGTCTTATGCACCTGACATGCCCATTCACTGCTGCAAAAT
 
. : . : . : . : . : . :
JMSF036C11+ GAAGAGCAGTCCGCCCACTAAGATAGTCTGCTCTTGTAACATTGCATCTAAACAGAAGAA
JMFF020B23+ GAAGAGCAGTCCGCCCACTAAGATAGTCTGCTCTTGTAACATTGCATCTAAACAGAAGAA
JMFF019J12+ GAAGAGCAGTCCGCCCACTAAGATAGTCTGCTCTTGTAACATTGCATCTAAACAGAAGAA
                      ____________________________________________________________
consensus GAAGAGCAGTCCGCCCACTAAGATAGTCTGCTCTTGTAACATTGCATCTAAACAGAAGAA
 
. : . : . : . : . : . :
JMSF036C11+ GAGTTTGAACAACTTCCCAGTGGCCATACCGACATGCTTGCATCAACGCCGTCTGACCAC
JMFF020B23+ GAGTTTGAACAACTTCCCAGTGGCCATACCGACATGCTTGCATCAACGCCGTCTGACCAC
JMFF019J12+ GAGTTTGAACAACTTCCCAGTTGCCATACCGACATGCTTGCATCAACGCCGTCTGACCAC
                      ____________________________________________________________
consensus GAGTTTGAACAACTTCCCAGTGGCCATACCGACATGCTTGCATCAACGCCGTCTGACCAC
 
. : . : . : . : . : . :
JMSF036C11+ AGTAGTTTTTAGAATTCACATCTGCACCATTCTCAAGCAGCAATGCGACAATCTCGTTGT
JMFF020B23+ AGTAGTTTTTAGAATTCACATCTGCACCATTCTCAAGCAGCAATGCGACAATCTCGTTGT
JMFF019J12+ AGTAGTTTTTAGAATTCACATCTGCACCATTCTCAAGCAGCAATGCGACAATCTCGTTGT
                      ____________________________________________________________
consensus AGTAGTTTTTAGAATTCACATCTGCACCATTCTCAAGCAGCAATGCGACAATCTCGTTGT
 
. : . : . : . : . : . :
JMSF036C11+ GACCCTTAGCAGCTGCAAAGTGAAGAGGCGAGTTGAGGCCACCAAAAGTGGAGTACTTTG
JMFF020B23+ GACCCTTAGCAGCTGCAAAGTGAAGAGGCGAGTTGAGGCCACCAAAAGTGGAGTACTTTG
JMFF019J12+ GACCCTTAGCAGCTGCAAAGTGAAGAGGCGAGTTGAGGCCACCAAAAGTGGAGTACTTTG
                      ____________________________________________________________
consensus GACCCTTAGCAGCTGCAAAGTGAAGAGGCGAGTTGAGGCCACCAAAAGTGGAGTACTTTG
 
. : . : . : . : . : . :
JMSF036C11+ CTAAATACGGGTTGCAATCAAGCAGCATCTTGGCTTCTACATAGTCACCGTCCCTTGCAG
JMFF020B23+ CTAAATACGGGTTGCAATCAAGCAGCATCTTGGCTTCTACATAGTCACCGTCCCTTGCAG
JMFF019J12+ CTAAATACGGGTTGCAATCAAGCAGCATCTTGGCTTCTACATAGTCACCGTCCCTTGCAG
                      ____________________________________________________________
consensus CTAAATACGGGTTGCAATCAAGCAGCATCTTGGCTTCTACATAGTCACCGTCCCTTGCAG
 
. : . : . : . : . : . :
JMSF036C11+ CTGAGACTAGCCGCTCCCCTGATGCAGAGCACCCAAAGGAGTTCCCCATCTTTCTTTCCC
JMFF020B23+ CTGAGACTAGCCGCTCTCCTGATGCAGAGCACCCAAAGGAGTTCCCCATCTTTCTTTCCC
JMFF019J12+ CTGAGACTAGCCGCTCTCCTGATGCAGAGCACCCAAAGGAGTTCCCCATCTTTCTTTCCC
                      ____________________________________________________________
consensus CTGAGACTAGCCGCTCTCCTGATGCAGAGCACCCAAAGGAGTTCCCCATCTTTCTTTCCC
 
. : . : . : . : . : . :
JMSF036C11+ TCTCTCTTCTCTGGAACAATC
JMFF020B23+ TCTCTCTTCTCTGGAACAATCTCAGTTTCTCTCTCTAAATCTCTAAGTATATACAGAC
JMFF019J12+ TCTCTCTTCTCTGGAACAATCTCAGTTTCTCTCTCTAAATCTCTAAGTATATACAGACGT
                      ____________________________________________________________
consensus TCTCTCTTCTCTGGAACAATCTCAGTTTCTCTCTCTAAATCTCTAAGTATATACAGACGT