| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018E18 | Sequence | 572 | 000092 (2) | ref|XP_002509954.1| | 7e-66 | endo-1,4-beta-glucanase, putative [Ricinus communis] gb|EEF51341.1| endo-1,4-bet | 775 | 005469 (2) | ref|NP_001234172.1| | 7e-33 | endo-beta-1,4-D-glucanase precursor [Solanum lycopersicum] gb|AAD08699.1| endo-b |
| JMFF035I23 | Sequence | 426 | 000092 (2) | gb|AHB32109.1| | 7e-32 | endoglucanase 6-like protein [Camellia sinensis] | 689 | 005469 (2) | ref|XP_006343864.1| | 3e-27 | PREDICTED: endoglucanase 6-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFF018E18+ CTCCATAGAGGACGTTGGGTTCAGGGTGAGCT
____________________________________________________________
consensus CTCCATAGAGGACGTTGGGTTCAGGGTGAGCT
. : . : . : . : . : . :
JMFF018E18+ TTGATGAAGTAGTCGGTGCCCCACTTAACGGCGTCCATGGCGTGGCCAAGCTCCCCACTG
____________________________________________________________
consensus TTGATGAAGTAGTCGGTGCCCCACTTAACGGCGTCCATGGCGTGGCCAAGCTCCCCACTG
. : . : . : . : . : . :
JMFF035I23+ AACGCC
JMFF018E18+ GCCGCCATTTGTTTGCCATATTCGATGATACTCCAGGACATCATGGTCACCGTGAACGCC
____________________________________________________________
consensus GCCGCCATTTGTTTGCCATATTCGATGATACTCCAGGACATCATGGTCACCGTGAACGCC
. : . : . : . : . : . :
JMFF035I23+ ATGGGCAACCCAAATTTCACATTGTCCCCGGCATCATAGTACCCTCCAACAAGATCCACC
JMFF018E18+ ATGGGCAACCCAAATTTCACATTGTCCCCGGCATCATAGTACCCTCCAACAAGATCCACC
____________________________________________________________
consensus ATGGGCAACCCAAATTTCACATTGTCCCCGGCATCATAGTACCCTCCAACAAGATCCACC
. : . : . : . : . : . :
JMFF035I23+ NCATTAGCTTTTCCATCAAGGAGGCCGGAATGACCCCTCCAGCGGACTCTCTGGTTAGAG
JMFF018E18+ CCATTAGCTTTTCCATCAAGGAGGCCGGAATGACCCCTCCAGCGGACTCTCTGGTTAGAG
____________________________________________________________
consensus CCATTAGCTTTTCCATCAAGGAGGCCGGAATGACCCCTCCAGCGGACTCTCTGGTTAGAG
. : . : . : . : . : . :
JMFF035I23+ GGGAGATACCCAGATCTCTGAGCCTCGTAGAAGAGGAAGCTCTTGCTGAGAGCTT
JMFF018E18+ GGGAGATACCCAGATCTCTGAGCCTCGTAGAAGAGGAAGCTCTTGCTGAGAGCTTGGGCG
____________________________________________________________
consensus GGGAGATACCCAGATCTCTGAGCCTCGTAGAAGAGGAAGCTCTTGCTGAGAGCTTGGGCG
. : . : . : . : . : . :
JMFF018E18+ TAGTCATGGCCGGCCAATGCGAGAGGAAGAAGACCCAGAACCAGAAACAGTGGAGCTATG
____________________________________________________________
consensus TAGTCATGGCCGGCCAATGCGAGAGGAAGAAGACCCAGAACCAGAAACAGTGGAGCTATG
. : . : . : . : . : . :
JMFF018E18+ GAACAGAGCTTCACAATTCCCTTCATTCTAAAAACCAAAATAATAATACGTACTCGCGAG
____________________________________________________________
consensus GAACAGAGCTTCACAATTCCCTTCATTCTAAAAACCAAAATAATAATACGTACTCGCGAG
. : . : . : . : . : . :
JMFF018E18+ CTGTGCAGATCTACTCTGTGAATCCAAGTGTAAAATGAACAATGCGGGTTTGTTTATCAG
____________________________________________________________
consensus CTGTGCAGATCTACTCTGTGAATCCAAGTGTAAAATGAACAATGCGGGTTTGTTTATCAG
. : . : . : . : . : . :
JMFF018E18+ CTGATAAACATAGCCAGAACAGAGCAGACCCGCCGGAGAAGAGAATGGGGGGATTGAGAT
____________________________________________________________
consensus CTGATAAACATAGCCAGAACAGAGCAGACCCGCCGGAGAAGAGAATGGGGGGATTGAGAT