| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP003F03 | Sequence | 632 | 000088 (6) | ref|XP_009771486.1| | 7e-144 | PREDICTED: prohibitin-1, mitochondrial [Nicotiana sylvestris] | |||||
| JMFF017H03 | Sequence | 536 | 000088 (6) | ref|XP_009771486.1| | 6e-91 | PREDICTED: prohibitin-1, mitochondrial [Nicotiana sylvestris] | 769 | 000088 (6) | gb|KHN43644.1| | 2e-89 | Prohibitin-2 [Glycine soja] |
| JMFF042A19 | Sequence | 597 | 000088 (6) | ref|XP_009607700.1| | 2e-108 | PREDICTED: prohibitin-1, mitochondrial [Nicotiana tomentosiformis] | 622 | 000088 (6) | gb|ACJ83732.1| | 1e-42 | unknown [Medicago truncatula] |
| JMFN033P15 | Sequence | 643 | 000088 (6) | ref|XP_009771486.1| | 2e-120 | PREDICTED: prohibitin-1, mitochondrial [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF042A19- ATATGAAT
____________________________________________________________
consensus ATATGAAT
. : . : . : . : . : . :
rJMFF042A19- ACCACTGTTTATTAGTAATAATAAAGTCAATGTTTCAATTAAGAACCAACTAGCTTCCAG
rJMFF017H03- AGTAATAATAAAGTCAATGTTTCAATTAAGAACCAACTAGCTTCCAG
____________________________________________________________
consensus ACCACTGTTTATTAGTAATAATAAAGTCAATGTTTCAATTAAGAACCAACTAGCTTCCAG
. : . : . : . : . : . :
rJMFF042A19- ATTAAAACCATCTGAAATAATATCCCTCAAGGCACTTGCATTTTTTTGCTCCTAAAAAGT
rJMFF017H03- ATTAAAACCATCTGAAATAATATCCCTCAAGGCACTTGCATTTTTTTGCTCCTAAAAAGT
____________________________________________________________
consensus ATTAAAACCATCTGAAATAATATCCCTCAAGGCACTTGCATTTTTTTGCTCCTAAAAAGT
. : . : . : . : . : . :
rJMFF042A19- AAATTTCTTGCGCAAAATGCATATTCCTGTTTCAACAATCCACAAAAGCAAGCATAGGTA
rJMFF017H03- AAATTTCTTGCGCAAAATGCATATTCCTGTTTCAACAATCCACAAAAGCAAGCATAGGTA
____________________________________________________________
consensus AAATTTCTTGCGCAAAATGCATATTCCTGTTTCAACAATCCACAAAAGCAAGCATAGGTA
. : . : . : . : . : . :
rJMFF042A19- AAAGGTGTTCCTGTTCAGACTTCAAAGGAACTTCCCCCACGATAAGTGAACGTGGGAGAG
rJMFF017H03- AAAGGTGTTCCTGTTCAGACTTCAAAGGAACTTCCCCCACGATAAGTGAACGTGGGAGAG
____________________________________________________________
consensus AAAGGTGTTCCTGTTCAGACTTCAAAGGAACTTCCCCCACGATAAGTGAACGTGGGAGAG
. : . : . : . : . : . :
rJMFF042A19- ACTCAATTGTATGGGTCTAACAGTTTTTGATCACTTCCTTCCGCTCTCCAGGTTCAGGTC
rJMFF017H03- ACTCAATTGTATGGGTCTAACAGTTTTTGATCACTTCCTTCCGCTCTCCAGGTTCAGGTC
____________________________________________________________
consensus ACTCAATTGTATGGGTCTAACAGTTTTTGATCACTTCCTTCCGCTCTCCAGGTTCAGGTC
. : . : . : . : . : . :
rJMFF042A19- CTGGAGGTTGAGCAGCAAATCGTCGGAGCTCAAGTATACTCTGTTGGCCGAGGATGAGAT
rJMFF017H03- CTGGAGGTTGAGCAGCAAATCGTCGGAGCTCAAGTATACTCTGTTGGCCGAGGATGAGAT
____________________________________________________________
consensus CTGGAGGTTGAGCAGCAAATCGTCGGAGCTCAAGTATACTCTGTTGGCCGAGGATGAGAT
. : . : . : . : . : . :
rJMFF042A19- TGTGCTAGCGATTTCTCGTGCTGCTTCAATCTTCCTGAGCGTGATGAAGGCTGGGTTGTT
rJMFF017H03- TGTGCTAGCGATTTCTCGTGCTGCTTCAATCTTCCTGAGCGTGATGAAGGCTGGGTTGTT
rJMCP003F03+ AGGCTGGGTTGTT
____________________________________________________________
consensus TGTGCTAGCGATTTCTCGTGCTGCTTCAATCTTCCTGAGCGTGATGAAGGCTGGGTTGTT
. : . : . : . : . : . :
rJMFF042A19- GGCTATAGCTTGGCCAATCAGTTGTGCACTCTTAGCTTCTCCCTGTGCTCTAATAATAGC
rJMFF017H03- GGCTATAGCTTGGCCAATCAGTTGTGCACTCTTAGCTTCTCCCTGTGCTCTAATAATAGC
rJMCP003F03+ GGCTATAGCTTGGCCAATCAGTTGTGCACTCTTAGCTTCTCCCTGTGCTCTAATAATAGC
____________________________________________________________
consensus GGCTATAGCTTGGCCAATCAGTTGTGCACTCTTAGCTTCTCCCTGTGCTCTAATAATAGC
. : . : . : . : . : . :
rJMFF042A19- ACTGCGCTTGTCCTGTTCGGCTTTCTCCACGATGAACTTGGCTCTCTCAGCTTCCTGTGC
rJMFF017H03- ACTGCGCTTGTCCTGTTCGGCTTTCTCCACGATGAACTTGGCTCTCTCAGCTTCCTGTGC
rJMCP003F03+ ACTGCGCTTGTCCTGCTCGGCTTTCTCCACGATGAACTTGGCTCTCTCAGCTTCCTGTGC
____________________________________________________________
consensus ACTGCGCTTGTCCTGTTCGGCTTTCTCCACGATGAACTTGGCTCTCTCAGCTTCCTGTGC
. : . : . : . : . : . :
rJMFF042A19- TGCCACCTGTTTTGCTTCAATGGCAGCAGTGAATTCCCTCCC-AAAGTCAGGCTGGTGAT
rJMFF017H03- TGCCACCTGTTTTGCTTCAATGGCAGCAGTGAATTCCCTCCCAAAAGTCAGGCTGGTGAT
rJMCP003F03+ TGCCACCTGTTTTGCTTCAATGGCAGCAGTGAATTCCCTCCCAAAAGTCAGGCTGGTGAT
JMFN033P15+ T
____________________________________________________________
consensus TGCCACCTGTTTTGCTTCAATGGCAGCAGTGAATTCCCTCCCAAAAGTCAGGCTGGTGAT
. : . : . : . : . : . :
rJMFF042A19- AGACACATCATCTAG
rJMFF017H03- AGACACATCATCTAGTGCAATGTTGAAGTTAGCTGCCCTCTGAGTCAAAATTTCACGTAT
rJMCP003F03+ AGACACATCATCTAGTGCAATGTTGAAGTTAGCTGCCCTCTGAGTCAAAATTTCACGTAT
JMFN033P15+ AGACACATCATCTAGTGCAATGTTGAAGTTAGCTGCCCTCTGAGTCAAAATTTCACGTAT
JMFF042A19+ CACGTAT
____________________________________________________________
consensus AGACACATCATCTAGTGCAATGTTGAAGTTAGCTGCCCTCTGAGTCAAAATTTCACGTAT
. : . : . : . : . : . :
rJMFF017H03- CTTCCTACTCACAGTCTCTCTCTGGGTGATGAGCTGGCTGGCGTTATACTGGGCAACCAC
rJMCP003F03+ CTTCCTACTCACAGTCTCTCTCTGGGTGATGAGCTGGCTGGCGTTATACTGGGCAACCAC
JMFN033P15+ CTTCCTACTCACAGTCTCTCTCTGGGTGATGAGCTGGCTGGCGTTATACTGGGCAACCAC
JMFF042A19+ CTTCCTACTCACAGTCTCTCTCTGGGTGATGAGCTGGCTGGCGTTATACTGGGCAACCAC
____________________________________________________________
consensus CTTCCTACTCACAGTCTCTCTCTGGGTGATGAGCTGGCTGGCGTTATACTGGGCAACCAC
. : . : . : . : . : . :
rJMFF017H03- AGCCTTCAAGGTTTCATGAATGATGGAAGGCAACACCCTTTCATTATAGTTTTCACCAAG
rJMCP003F03+ AGCCTTCAAGGTTTCATGAATGATGGAAGGCAACACCCTTTCATTATAGTTTTCGCCAAG
JMFN033P15+ AGCCTTCAAGGTTTCATGAATGATGGAAGGCAACACCCTTTCATTATAGTTTTCACCAAG
JMFF042A19+ AGCCTTCAAGGTTTCATGAATGATGGAAGGCAACACCCTTTCATTATAGTTTTCACCAAG
JMFF017H03+ TTCAAGGTTTCATGAATGATGGAAGGCAACACCCTTTCATTATAGTTTTCACCAAG
____________________________________________________________
consensus AGCCTTCAAGGTTTCATGAATGATGGAAGGCAACACCCTTTCATTATAGTTTTCACCAAG
. : . : . : . : . : . :
rJMFF017H03- AG
rJMCP003F03+ AGTCCGATATACAGTAGGTAGCTGATCTGGCACTGGACGTGTTAAAACACGAAGACCAAT
JMFN033P15+ AGTTTGATATACAGTAGGTAGCTGATCTGGCACTGGACGTGTTAAAACACGAAGACCAAT
JMFF042A19+ AGTCCGATATACAGTAGGTAGCTGATCTGGCACTGGACGTGTTAAAACACGAAGACCAAT
JMFF017H03+ AGTCCGATATACAGTAGGTAGCTGATCTGGCACTGGACGTGTTAAAACATGAAGACCAAT
____________________________________________________________
consensus AGTCCGATATACAGTAGGTAGCTGATCTGGCACTGGACGTGTTAAAACACGAAGACCAAT
. : . : . : . : . : . :
rJMCP003F03+ TTTGACCATCTGAAGGTCACGACTTCCTGACGTGCTTTCAACTAAATGGGGTCTTGCACG
JMFN033P15+ TTTGACCATCTGAAGGTCACGACTTCCTGACGTGCTTTCAACTAAATGGGGTCTTGCACG
JMFF042A19+ TTTGACCATCTGAAGGTCACGACTTCCTGACGTGCTTTCAACTAAATGGGGTCTTGCACG
JMFF017H03+ TTTGACCATCTGAAGGTCACGACTTCCTGACGTGCTTTCAACTAAATGGGGTCTTGCACG
____________________________________________________________
consensus TTTGACCATCTGAAGGTCACGACTTCCTGACGTGCTTTCAACTAAATGGGGTCTTGCACG
. : . : . : . : . : . :
rJMCP003F03+ AACATCATAGATTATTGGTCTTTCAAACCATGGAAGCATAAAGTGTGTTCCTTCAGGATA
JMFN033P15+ AACATCATAGATTATTGGTCTTTCAAACCATGGAAGCATAAAGTGTGTTCCTTCAGGATA
JMFF042A19+ AACATCATAGATTATTGGTCTTTCAAACCATGGAAGCATAAAGTGTGTTCCTTCAGGATA
JMFF017H03+ AACATCATAGATTATTGGTCTTTCAAACCATGGAAGCATAAAGTGTGTTCCTTCAGGATA
____________________________________________________________
consensus AACATCATAGATTATTGGTCTTTCAAACCATGGAAGCATAAAGTGTGTTCCTTCAGGATA
. : . : . : . : . : . :
rJMCP003F03+ GACCTTATCTTTAATACCACCAATACGGTTGAAGACAATGGCACGATGCCCTCCATCAAC
JMFN033P15+ GACCTTATCTTTAATACCACCAATACGGTTGAAGACAATGGCACGATGCCCTCCATCAAC
JMFF042A19+ GACCTTATCTTTAATACCACCAATACGGTTGAAGACAATGGCACGATGCCCTCCATCAAC
JMFF017H03+ GACCTTATCTTTAATACCACCAATACGGTTGAAGACAATGGCACGATGCCCTCCATCAAC
____________________________________________________________
consensus GACCTTATCTTTAATACCACCAATACGGTTGAAGACAATGGCACGATGCCCTCCATCAAC
. : . : . : . : . : . :
rJMCP003F03+ ATTGTAGAGGCTGTTGGCA
JMFN033P15+ ATTGTAGAGGCTGTTGGCAACTCCATATATACCAATACCAGCAACAAGACCAACCTTGAT
JMFF042A19+ ATTGTAGAGGCTGTTGGCAACTCCATATATACCAATACCAGCAACAAGACCAACCTTGAT
JMFF017H03+ ATTGTAGAGGCTGTTGGCAACTCCATATATACCAATACCAGCAACAAGACCAACCTTGAT
____________________________________________________________
consensus ATTGTAGAGGCTGTTGGCAACTCCATATATACCAATACCAGCAACAAGACCAACCTTGAT
. : . : . : . : . : . :
JMFN033P15+ CAAAGCAGAAGCAGCACCACCACCAGGCATTTTAGGAACCTTAACATTGTTGAGATTCAT
JMFF042A19+ CAAAGCAGAAGCAGCACCACCACCAGGCATTTTAGGAACCTTAACATTGTTGAGATTCAT
JMFF017H03+ CAAAGCAGAAGCAGCACCACCACCAGGCATTTTAGGAACCTTAACATTGTTGAGATTCAT
____________________________________________________________
consensus CAAAGCAGAAGCAGCACCACCACCAGGCATTTTAGGAACCTTAACATTGTTGAGATTCAT
. : . : . : . : . : . :
JMFN033P15+ CTTTCCAATCCCTGATTTAGAACCGACGAGAGCTGACGATTATGAGCAAATGAGAGGGAA
JMFF042A19+ CTTTCCAATCCCTGATTTAGAACCGACGAGAGCTGACGATTATGAGCAAATGAGAGGGAA
JMFF017H03+ CTTTCCAATCCCTGATTTAGAACCGACGAGACCTGACGATTATGAGCAAATGAGAGGGAA
____________________________________________________________
consensus CTTTCCAATCCCTGATTTAGAACCGACGAGAGCTGACGATTATGAGCAAATGAGAGGGAA
. : . : . : . : . : . :
JMFN033P15+ AGATCGTCTTCGAGCTTGGAAATGAAGAACGCTGGGATTTTA
JMFF042A19+ AGATCGTCTTCGAGCTTGGAAATGAAGAACGCTGGGATTTTAGCCTCTTT
JMFF017H03+ AGATCGTCTTCGAGCTTGGAAATGAAGAACGCTGGGATTTTAGCCTCTTTGTGAAGGCTT
____________________________________________________________
consensus AGATCGTCTTCGAGCTTGGAAATGAAGAACGCTGGGATTTTAGCCTCTTTGTGAAGGCTT