Contig 000086:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017F15Sequence581000086 (2)ref|XP_010250448.1|3e-32PREDICTED: probable magnesium transporter NIPA8 isoform X2 [Nelumbo nucifera]788004243 (2)emb|CDP16754.1|3e-18unnamed protein product [Coffea canephora]
JMSF017J05Sequence622000086 (2)ref|XP_010250448.1|2e-43PREDICTED: probable magnesium transporter NIPA8 isoform X2 [Nelumbo nucifera]768004243 (2)

Alignment

This contig is upended


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JMSF017J05+                                            AGCTGCAAGTAGTGACTGAGCAGCGTA
                      ____________________________________________________________
consensus                                              AGCTGCAAGTAGTGACTGAGCAGCGTA
 
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JMSF017J05+           TCCAAATGAAATGAAATTTAGACAGTTCCCAACAGCAAAAAAAATAATTCCAATTCTCCA
JMFF017F15+                              AGACAGTTCCCAACAGCAAAAAAAATAATTCCAATTCTCCA
                      ____________________________________________________________
consensus             TCCAAATGAAATGAAATTTAGACAGTTCCCAACAGCAAAAAAAATAATTCCAATTCTCCA
 
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JMSF017J05+           TGTTTGGAAATATATTATGGGCTTCACTGCAACCTTCCCATTTGTTCCCTCCGTGTCCAG
JMFF017F15+           TGTTTGGAAATATATTATGGGCTTCACTGCAACCTTCCCATTTGTTCCCTCCGTGTCCAG
                      ____________________________________________________________
consensus             TGTTTGGAAATATATTATGGGCTTCACTGCAACCTTCCCATTTGTTCCCTCCGTGTCCAG
 
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JMSF017J05+           CATGGAATACTTTTCCTTCTCATCATGACCCAGTTTTAGAAGGTTGGTTCCAAAATTAAT
JMFF017F15+           CATGGAATACTTTTCCTTCTCATCATGACCCAGTTTTAGAAGGTTGGTTCCAAAATTAAT
                      ____________________________________________________________
consensus             CATGGAATACTTTTCCTTCTCATCATGACCCAGTTTTAGAAGGTTGGTTCCAAAATTAAT
 
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JMSF017J05+           GGCAATGCTGCCGAAAAGGTTGATGAATGCTCCAATCACCCACTCCCCCATAAGGTTGAT
JMFF017F15+           GGCAATGCTGCCGAAAAGGTTGATGAATGCTCCAATCACCCACTCCCCCATAAGGTTGAT
                      ____________________________________________________________
consensus             GGCAATGCTGCCGAAAAGGTTGATGAATGCTCCAATCACCCACTCCCCCATAAGGTTGAT
 
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JMSF017J05+           TGCAGCCAAGCAGAATGTTGAGAGTGGTGAGAATACTTAAGCAATCAACTGAGGTCAGTT
JMFF017F15+           TGCAGCCAAGCAGAATGTTGAGAGTGGTGAGAATACTTAAGCAATCAACTGAGGTCAGTT
                      ____________________________________________________________
consensus             TGCAGCCAAGCAGAATGTTGAGAGTGGTGAGAATACTTAAGCAATCAACTGAGGTCAGTT
 
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JMSF017J05+           CTTCTTGCAAAACAGTGATTGGCATACCATCTCGGGCGAACAAGGACGCGCCTGTGCTTT
JMFF017F15+           CTTCTTGCAAAACAGTGATTGGCATACCATCTCGGGCGAACAAGGACGCGCCTGTGCTTT
                      ____________________________________________________________
consensus             CTTCTTGCAAAACAGTGATTGGCATACCATCTCGGGCGAACAAGGACGCGCCTGTGCTTT
 
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JMSF017J05+           GCAATCCGGAAATGGAAAAGCAAATGCTGAGCCAAAAAGAATCGCTCAGCAGATCTGACG
JMFF017F15+           GCAATCCGGAAATGGAAAAGCAAATGCTGAGCCAAAAAGAATCGCTCAGCAGATCTGACG
                      ____________________________________________________________
consensus             GCAATCCGGAAATGGAAAAGCAAATGCTGAGCCAAAAAGAATCGCTCAGCAGATCTGACG
 
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JMSF017J05+           ACGACGAACCCTGTGTTGAGTCCCCCCTCCCCTTGATCTAGTGTATATATTTCACCTGGA
JMFF017F15+           ACGACGAACCCTGTGTTGAGTCCCCCCTCCCCTTGATCTAGTGTATATATTTCACCTGGA
                      ____________________________________________________________
consensus             ACGACGAACCCTGTGTTGAGTCCCCCCTCCCCTTGATCTAGTGTATATATTTCACCTGGA
 
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JMSF017J05+           AACCGATCACATTACATAACAATGATATTGGATGGATGGATAGCAAAATGCAGTATTGCA
JMFF017F15+           AACCGATCACATTACATAACAATGATATTGGATGGATGGATAGCAAAATGCAGTATTGCA
                      ____________________________________________________________
consensus             AACCGATCACATTACATAACAATGATATTGGATGGATGGATAGCAAAATGCAGTATTGCA
 
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JMSF017J05+           AGAAAAAATCGGATTTAGCGAGAAAGGATGAGGTGGAGGAGGGAGGGGTTCAAC      
JMFF017F15+           AGAAAAAATCGGATTTAGCGAGAAAGGATGAGGTGGAGGAGGGAGGGGTTCAACACTTTT
                      ____________________________________________________________
consensus             AGAAAAAATCGGATTTAGCGAGAAAGGATGAGGTGGAGGAGGGAGGGGTTCAACACTTTT