Contig 000085:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017E08Sequence526000085 (2)ref|XP_009601808.1|2e-10PREDICTED: uncharacterized protein LOC104097013 isoform X3 [Nicotiana tomentosi764011030 (2)ref|XP_009785970.1|2e-60PREDICTED: uncharacterized protein LOC104234155 isoform X2 [Nicotiana sylvestri
JMFF035B14Sequence522000085 (2)ref|XP_009601808.1|2e-09PREDICTED: uncharacterized protein LOC104097013 isoform X3 [Nicotiana tomentosi716011030 (2)ref|XP_009785970.1|8e-61PREDICTED: uncharacterized protein LOC104234155 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


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JMFF035B14+                             TTTTGTAGCCTCCATGACCAGTGGCACTGCGATTGATCCACT
JMFF017E08+                         CCTCTTTTGTAGCCTCCATGACCAGTGGCACTGCGATTGATCCACT
                      ____________________________________________________________
consensus                           CCTCTTTTGTAGCCTCCATGACCAGTGGCACTGCGATTGATCCACT
 
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JMFF035B14+           CTCTGCAATTCTATTTACATTGTTAACCAAGCCACCCTCCTTCAATACCTGCAATAACTT
JMFF017E08+           CTCTGCAATTCTATTTACATTGTTAACCAAGTCACCCTCCTTCAATACCTGCAATAACTT
                      ____________________________________________________________
consensus             CTCTGCAATTCTATTTACATTGTTAACCAAGTCACCCTCCTTCAATACCTGCAATAACTT
 
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JMFF035B14+           CACTATATTAGCAAAAGTCTCTGAGACGGACGCTTCCTGCAATGGGCTCCGACTTTTGAG
JMFF017E08+           CACTATATTAGCAAAAGTCTCTGAGACGGACGCTTCCTGCAATGGGCTCCGACTTTTGAG
                      ____________________________________________________________
consensus             CACTATATTAGCAAAAGTCTCTGAGACGGACGCTTCCTGCAATGGGCTCCGACTTTTGAG
 
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JMFF035B14+           CTCCTGAATTTGAAGCTGCAGGGCCTGAATTTCTCTTAGAAGAGCTTCACGTTCAGCGTT
JMFF017E08+           CTCCTGAATTTGAAGCTGCAGGGCCTGAATTTCTCTTAGAAGAGCTTCACGTTCAGCGTT
                      ____________________________________________________________
consensus             CTCCTGAATTTGAAGCTGCAGGGCCTGAATTTCTCTTAGAAGAGCTTCACGTTCAGCGTT
 
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JMFF035B14+           CCACCGCCGCTCTTCACGGAGCCACCGCTGCTCCTCCCTGAGCCACCGCTGCTCTTCCCG
JMFF017E08+           CCACCGCCGCTCTTCACGGAGCCACCGCTGCTCCTCCCTGAGCCACCGCTGCTCTTCCCG
                      ____________________________________________________________
consensus             CCACCGCCGCTCTTCACGGAGCCACCGCTGCTCCTCCCTGAGCCACCGCTGCTCTTCCCG
 
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JMFF035B14+           GAGCCACCGTACTTCCGCTCGCTGCTCAAATCCCGAGCTGTCTCCGCTGTTAGAGGGAGG
JMFF017E08+           GAGCCACCGTACTTCCGCTCGCTGCTCAAATCCCGAGCTGTCTCCGCTGTTAGAGGGAGG
                      ____________________________________________________________
consensus             GAGCCACCGTACTTCCGCTCGCTGCTCAAATCCCGAGCTGTCTCCGCTGTTAGAGGGAGG
 
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JMFF035B14+           CAACGCGAAGCAAATGTGAGATTTCGAGAGAATTTCAAGCGAAGGTTTGAAGAAAAACGG
JMFF017E08+           CAACGCGAAGCAAATGTGAGATTTCGAGAGAATTTCAAGCGAAGGTTTGAAGAAAAACGG
                      ____________________________________________________________
consensus             CAACGCGAAGCAAATGTGAGATTTCGAGAGAATTTCAAGCGAAGGTTTGAAGAAAAACGG
 
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JMFF035B14+           AGCTCTTGTTGTTGATTCTGATAAAGATTGCGGTTTTCGGTGTGTTATGGTATTGAAGCT
JMFF017E08+           AGCTCTTGTTGTTGATTCTGATAAAGATTGCGGTTTTCGGTGTGTTATGGTATTGAAGCT
                      ____________________________________________________________
consensus             AGCTCTTGTTGTTGATTCTGATAAAGATTGCGGTTTTCGGTGTGTTATGGTATTGAAGCT
 
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JMFF035B14+           GAAGGTCACTGGTAATGAAATCGCCATGGATGTGGAGAGAAATGGCCCCTGAAGGTATGG
JMFF017E08+           GAAGGTCACTGGTAATGAAATCGCCATGGATGTGGAGAGAAATGGCCCCTGAAGGTATGG
                      ____________________________________________________________
consensus             GAAGGTCACTGGTAATGAAATCGCCATGGATGTGGAGAGAAATGGCCCCTGAAGGTATGG