Contig 000083:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010H20Sequence646000083 (7)ref|XP_009594586.1|7e-59PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Nicotiana tomentosifo746024322ref|XP_009594586.1|2e-58PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Nicotiana tomentosifo
JMFF017C20Sequence503000083 (7)ref|XP_009594586.1|9e-36PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Nicotiana tomentosifo747014837ref|XP_011084204.1|4e-08PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Sesamum indicum]
JMFN007H14Sequence632000083 (7)ref|XP_009594586.1|3e-59PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Nicotiana tomentosifo
JMFN009A13Sequence625000083 (7)ref|XP_009594586.1|6e-59PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Nicotiana tomentosifo
JMFN015O10Sequence627000083 (7)ref|XP_009594586.1|2e-59PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Nicotiana tomentosifo
JMFN034L21Sequence618000083 (7)ref|XP_009594586.1|5e-59PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Nicotiana tomentosifo
JMFN038L06Sequence632000083 (7)ref|XP_009594586.1|3e-59PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Nicotiana tomentosifo

Alignment

This contig is upended


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JMFN007H14+                                                                   TTTT
                      ____________________________________________________________
consensus                                                                     TTTT
 
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JMFN007H14+           TGAACCAAAGGCGCCTATATATTATTATATTATGTATACATAGTTGATATACAAGAACAT
JMFN038L06+                  AAGGCGCCTATATATTATTATATTATGTATACATAGTTGATATACAAGAACAT
JMFN015O10+                  AAGGCGCCTATATATTATTATATTATGTATACATAGTTGATATACAAGAACAT
JMFN009A13+                              TATTATTATATTATGTATACATAGTTGATATACAAGAACAT
JMFN034L21+                                      TATTATGTATACATAGTGNATATACAAGAACAT
JMFF010H20+                        CCTATATATTATTATATTANGTATACATAGTTGATATACAAGAACAT
                      ____________________________________________________________
consensus             TGAACCAAAGGCGCCTATATATTATTATATTATGTATACATAGTTGATATACAAGAACAT
 
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JMFN007H14+           AAGTTTGGTTAAGATGATGTTTGATGGGTTTGTGTGCGCATTCTTGCTCCCCAAGATGCA
JMFN038L06+           AAGTTTGGTTAAGATGATGTTTGATGGGTTTGTGTGCGCATTCTTGCTCCCCAAGATGCA
JMFN015O10+           AAGTTTGGTTAAGATGATGTTTGATGGGTTTGTGTGCGCATTCTTGCTCCCCAAGATGCA
JMFN009A13+           AAGTTTGGTTAAGATGATGTTTGATGGGTTTGTGTGCGCATTCTTGCTCCCCAAGATGCA
JMFN034L21+           AAGTTTGGTTAAGATGATGTTTGATGGGTTTGTGTGCGCATTCTTGCTCCCCAAGATGCA
JMFF010H20+           AAGTTTGGTTAAGATGATGTTTGATGGGTTTGTGTGCGCATTCTTGCTCCCCAAGATGCA
                      ____________________________________________________________
consensus             AAGTTTGGTTAAGATGATGTTTGATGGGTTTGTGTGCGCATTCTTGCTCCCCAAGATGCA
 
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JMFN007H14+           TTCTTAGACATGCTCCTTCTCTTTAACTCTGAAAGCTGAGACTGCCATCTGCTTTTCCAT
JMFN038L06+           TTCTTAGACATGCTCCTTCTCTTTAACTCTGAAAGCTGAGACTGCCATCTGCTTTTCCAT
JMFN015O10+           TTCTTAGACATGCTCCTTCTCTTTAACTCTGAAAGCTGAGACTGCCATCTGCTTTTCCAT
JMFN009A13+           TTCTTAGACATGCTCCTTCTCTTTAACTCTGAAAGCTGAGACTGCCATCTGCTTTTCCAT
JMFN034L21+           TTCTTAGACATGCTCCTTCTCTTTAACTCTGAAAGCTGAGACTGCCATCTGCTTTTCCAT
JMFF010H20+           TTCTTAGACATGCTCCTTCTCTTTAACTCTGAAAGCTGAGACTGCCATCTGCTTTTCCAT
                      ____________________________________________________________
consensus             TTCTTAGACATGCTCCTTCTCTTTAACTCTGAAAGCTGAGACTGCCATCTGCTTTTCCAT
 
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JMFN007H14+           TCACTTTTATCTTCCATAGGCTGGTCTCTACAGTAACGCCTACGTGAGGAGCGGAGGCCT
JMFN038L06+           TCACTTTTATCTTCCATAGGCTGGTCTCTACAGTAACGCCTACGTGAGGAGCGGAGGCCT
JMFN015O10+           TCACTTTTATCTTCCATAGGCTGGTCTCTACAGTAACGCCTACGTGAGGAGCGGAGGCCT
JMFN009A13+           TCACTTTTATCTTCCATAGGCTGGTCTCTACAGTAACGCCTACGTGAGGAGCGGAGGCCT
JMFN034L21+           TCACTTTTATCTTCCATAGGCTGGTCTCTACAGTAACGCCTACGTGAGGAGCGGAGGCCT
JMFF010H20+           TCACTTTTATCTTCCATAGGCTGGTCTCTACAGTAACGCCTACGTGAGGAGCGGAGGCCT
JMFF017C20+                               CTGGTCTCTACAGTAACGCCTACGTGAGGAGCGGAGGCCT
                      ____________________________________________________________
consensus             TCACTTTTATCTTCCATAGGCTGGTCTCTACAGTAACGCCTACGTGAGGAGCGGAGGCCT
 
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JMFN007H14+           TTAGCCCTATCTGTATCGTACAGAGCTCTGGTTTTAGGATCCGAGAGTGTCTGATACGCG
JMFN038L06+           TTAGCCCTATCTGTATCGTACAGAGCTCTGGTTTTAGGATCCGAGAGTGTCTGATACGCG
JMFN015O10+           TTAGCCCTATCTGTATCGTACAGAGCTCTGGTTTTAGGATCCGAGAGTGTCTGATACGCG
JMFN009A13+           TTAGCCCTATCTGTATCGTACAGAGCTCTGGTTTTAGGATCCGAGAGTGTCTGATACGCG
JMFN034L21+           TTAGCCCTATCTGTATCGTACAGAGCTCTGGTTTTAGGATCCGAGAGTGTCTGATACGCG
JMFF010H20+           TTAGCCCTATCTGTATCGTACAGAGCTCTGGTTTTAGGATCCGAGAGTGTCTGATACGCG
JMFF017C20+           TTAGCCCTATCTGTATCGTACAGAGCTCTGGTTTTAGGATCCGAGAGTGTCTGATACGCG
                      ____________________________________________________________
consensus             TTAGCCCTATCTGTATCGTACAGAGCTCTGGTTTTAGGATCCGAGAGTGTCTGATACGCG
 
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JMFN007H14+           TGCTGAACCCGAATGAATCTCTGGGTGTACTCCTCGACCCGCTCCGGCGGCCAAACGTCC
JMFN038L06+           TGCTGAACCCGAATGAATCTCTGGGTGTACTCCTCGACCCGCTCCGGCGGCCAAACGTCC
JMFN015O10+           TGCTGAACCCGAATGAATCTCTGGGTGTACTCCTCGACCCGCTCCGGCGGCCAAACGTCC
JMFN009A13+           TGCTGAACCCGAATGAATCTCTGGGTGTACTCCTCGACCCGCTCCGGCGGCCAAACGTCC
JMFN034L21+           TGCTGAACCCGAATGAATCTCTGGGTGTACTCCTCGACCCGCTCCGGCGGCCAAACGTCC
JMFF010H20+           TGCTGAACCCGAATGAATCTCTGGGTGTACTCCTCGACCCGCTCCGGCGGCCAAACGTCC
JMFF017C20+           TGCTGAACCCGAATGAATCTCTGGGTGTACTCCTCGACCCGCTCCGGCGGCCAAACGTCC
                      ____________________________________________________________
consensus             TGCTGAACCCGAATGAATCTCTGGGTGTACTCCTCGACCCGCTCCGGCGGCCAAACGTCC
 
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JMFN007H14+           GGATGGTACTTCCGGGCCAACTGCTTGTACGCCCGTTTGATCTCGGGCAACGACCCCGTC
JMFN038L06+           GGATGGTACTTCCGGGCCAACTGCTTGTACGCCCGTTTGATCTCGGGCAACGACCCCGTC
JMFN015O10+           GGATGGTACTTCCGGGCCAACTGCTTGTACGCCCGTTTGATCTCGGGCAACGACCCCGTC
JMFN009A13+           GGATGGTACTTCCGGGCCAACTGCTTGTACGCCCGTTTGATCTCGGGCAACGACCCCGTC
JMFN034L21+           GGATGGTACTTCCGGGCCAACTGCTTGTACGCCCGTTTGATCTCGGGCAACGACCCCGTC
JMFF010H20+           GGATGGTACTTCCGGGCCAACTGCTTGTACGCCCGTTTGATCTCGGGCAACGACCCCGTC
JMFF017C20+           GGATGGTACTTCCGGGCCAACTGCTTGTACGCCCGTTTGATCTCGGGCAACGACCCCGTC
                      ____________________________________________________________
consensus             GGATGGTACTTCCGGGCCAACTGCTTGTACGCCCGTTTGATCTCGGGCAACGACCCCGTC
 
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JMFN007H14+           TCCGGTATCCCCAGGAGGTCGTACAAGGAACCCGGTTGGGCATCCTTGAGTTTGGATTGG
JMFN038L06+           TCCGGTATCCCCAGGAGGTCGTACAAGGAACCCGGTTGGGCATCCTTGAGTTTGGATTGG
JMFN015O10+           TCCGGTATCCCCAGGAGGTCGTACAAGGAACCCGGTTGGGCATCCTTGAGTTTGGATTGG
JMFN009A13+           TCCGGTATCCCCAGGAGGTCGTACAAGGAACCCGGTTGGGCATCCTTGAGTTTGGATTGG
JMFN034L21+           TCCGGTATCCCCAGGAGGTCGTACAAGGAACCCGGTTGGGCATCCTTGAGTTTGGATTGG
JMFF010H20+           TCCGGTATCCCCAGGAGGTCGTACAAGGAACCCGGTTGGGCATCCTTGAGTTTGGATTGG
JMFF017C20+           TCCGGTATCCCCAGGAGGTCGTACAAGAAACCCGGTTGGGCATCCTTGAGTTTGGATTGG
                      ____________________________________________________________
consensus             TCCGGTATCCCCAGGAGGTCGTACAAGGAACCCGGTTGGGCATCCTTGAGTTTGGATTGG
 
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JMFN007H14+           ATACGGAAGCGGGGAAGGGGATGGACGGGGAAGAAGACGCGGCGGCATGTGAGGGAGGAG
JMFN038L06+           ATACGGAAGCGGGGAAGGGGATGGACGGGGAAGAAGACGCGGCGGCATGTGAGGGAGGAG
JMFN015O10+           ATACGGAAGCGGGGAAGGGGATGGACGGGGAAGAAGACGCGGCGGCATGTGAGGGAGGAG
JMFN009A13+           ATACGGAAGCGGGGAAGGGGATGGACGGGGAAGAAGACGCGGCGGCATGTGAGGGAGGAG
JMFN034L21+           ATACGGAAGCGGGGAAGGGGATGGACGGGGAAGAAGACGCGGCGGCATGTGAGGGAGGAG
JMFF010H20+           ATACGGAAGCGGGGAAGGGGATGGACGGGGAAGAAGACGCGGCGGCATGTGAGGGAGGAG
JMFF017C20+           ATACGGAAGCGGGGAAGGGGATGGACGGGGAAGAAGACGCGGCGGCATGTGAGGGAGGAG
                      ____________________________________________________________
consensus             ATACGGAAGCGGGGAAGGGGATGGACGGGGAAGAAGACGCGGCGGCATGTGAGGGAGGAG
 
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JMFN007H14+           AAGCGTGGCGGGTCGGTTCTTGATAGCGTAAGACCAAAGGAGTTGCAGCACAACATCTCT
JMFN038L06+           AAGCGTGGCGGGTCGGTTCTTGATAGCGTAAGACCAAAGGAGTTGCAGCACAACATCTCT
JMFN015O10+           AAGCGTGGCGGGTCGGTTCTTGATAGCGTAAGACCAAAGGAGTTGCAGCACAACATCTCT
JMFN009A13+           AAGCGTGGCGGGTCGGTTCTTGATAGCGTAAGACCAAAGGAGTTGCAGCACAACATCTCT
JMFN034L21+           AAGCGTGGCGGGTCGGTTCTTGATAGCGTAAGACCAAAGGAGTTGCAGCACAACATCTCT
JMFF010H20+           AAGCGTGGCGGGTCGGTTCTTGATAGCGTAAGACCAAAGGAGTTGCAGCACAACATCTCT
JMFF017C20+           AAGCGTGGCGGGTCGGTTCTTGATAGCGTAAGACCAAAGGAGTTGCAGCACAACATCTCT
                      ____________________________________________________________
consensus             AAGCGTGGCGGGTCGGTTCTTGATAGCGTAAGACCAAAGGAGTTGCAGCACAACATCTCT
 
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JMFN007H14+           TCTTCTTCTTCTTCTAATCTCTGTTCTG                                
JMFN038L06+           TCTTCTTCTTCTTCTAATCTCTGTTCTGTTTC                            
JMFN015O10+           TCTTCTTCTTCTTCTAATCTCTGTTCTGTTTCCA                          
JMFN009A13+           TCTTCTTCTTCTTCTAATCTCTGTTCTGTTTCCAGTAATAATGT                
JMFN034L21+           TCTTCTTCTTCTTCTAATCTCTGTTCTGTTTCCAGTAATAATGTT               
JMFF010H20+           TCTTCTTCTTCTTCTAATCTCTGTTCTGTTTCCAGTAATAATGTTTTGAAGTGGAACGC 
JMFF017C20+           TCTTCTTCTTCTTCTAATCTCTGTTCTGTTTCCAGTAATAATGTTTTGAAGTGGAACGCT
                      ____________________________________________________________
consensus             TCTTCTTCTTCTTCTAATCTCTGTTCTGTTTCCAGTAATAATGTTTTGAAGTGGAACGCT