clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF015P03 | Sequence | 560 | 000076 (4) | ref|XP_011073568.1| | 2e-68 | PREDICTED: probable beta-1,3-galactosyltransferase 11 [Sesamum indicum] | |||||
JMFF047J19 | Sequence | 640 | 000076 (4) | ref|XP_011073568.1| | 2e-67 | PREDICTED: probable beta-1,3-galactosyltransferase 11 [Sesamum indicum] | |||||
JMSF012A18 | Sequence | 211 | 000076 (4) | ref|XP_011073568.1| | 9e-19 | PREDICTED: probable beta-1,3-galactosyltransferase 11 [Sesamum indicum] | 767 | 008587 (2) | ref|XP_009598325.1| | 1e-84 | PREDICTED: probable beta-1,3-galactosyltransferase 11 isoform X2 [Nicotiana tom |
JMSF035I16 | Sequence | 628 | 000076 (4) | emb|CDP12114.1| | 8e-94 | unnamed protein product [Coffea canephora] | 777 | 008587 (2) | ref|XP_009598325.1| | 1e-77 | PREDICTED: probable beta-1,3-galactosyltransferase 11 isoform X2 [Nicotiana tom |
This contig is upended
. : . : . : . : . : . :
JMSF035I16+ ACTCCACATGATCATTAAGAATAATGAAGT
____________________________________________________________
consensus ACTCCACATGATCATTAAGAATAATGAAGT
. : . : . : . : . : . :
JMSF035I16+ CATTGGTGTGCCTATTTTCATCCTCAATGTCCCTATCTGAATGGTCTCCACGATTTGCAC
JMFF047J19+ ATCCTCAATGTCCCTATCTGAATGGTCTCCACGATTGCACT
____________________________________________________________
consensus CATTGGTGTGCCTATTTTCATCCTCAATGTCCCTATCTGAATGGTCTCCACGATTTGCCT
. : . : . : . : . : . :
JMSF035I16+ TTCTTCCTATGACGAATCGTACAACTATACCATTTTCCTCCTCCAGTTTTTTTAGAGCAC
JMFF047J19+ TTCTTCCTATGACGAATCGTACAACTATACCATTTCCTCNCTCCAG-TTTTTTAGAGCAC
JMFF015P03+ TTTTTTAGAGCAC
____________________________________________________________
consensus TTCTTCCTATGACGAATCGTACAACTATACCATTTTCTTCCTCCAGTTTTTTTAGAGCAC
. : . : . : . : . : . :
JMSF035I16+ TGCCAGTTGGCATCCAAGCTTTACGAATTGCTTCTCTGTTTTTCCTGCGGTCAAACTCTG
JMFF047J19+ TGCCAGTTGGCATCCAAGCTTTACGAATTGCTTCTCTGTTTTTCCTGCGGTCAAACTCTG
JMFF015P03+ TGCCAGTTGGCATCCAAGCTTTACGAATTGCTTCTCTGTTTTTCCTGCGGTCAAACTCTG
____________________________________________________________
consensus TGCCAGTTGGCATCCAAGCTTTACGAATTGCTTCTCTGTTTTTCCTGCGGTCAAACTCTG
. : . : . : . : . : . :
JMSF035I16+ TAATGATCCCTAAAACCGCCAGAAGTTTTTTCTTTGAATGATTCCCACTATTATCTGGGA
JMFF047J19+ TAATGATCCCTAAAACCGCCAGAAGTTTTTTCTTTGAATGATTCCCACTATTATCTGGGA
JMFF015P03+ TAATGATCCCTAAAACCGCCAGAAGTTTTTTCTTTGAATGATTCCCACTATTATCTGGGA
____________________________________________________________
consensus TAATGATCCCTAAAACCGCCAGAAGTTTTTTCTTTGAATGATTCCCACTATTATCTGGGA
. : . : . : . : . : . :
JMSF035I16+ CACGATTTGACACAAAACCTTCTTGCTTAGCTTTTTCAAGCTCCATATGAAGTGCACCTA
JMFF047J19+ CACGATTTGACACAAAACCTTCTTGCTTAGCTTTTTCAAGCTCCATATGAAGTGCACCTA
JMFF015P03+ CACGATTTGACACAAAACCTTCTTGCTTAGCTTTTTCAAGCTCCATATGAAGTGCACCTA
____________________________________________________________
consensus CACGATTTGACACAAAACCTTCTTGCTTAGCTTTTTCAAGCTCCATATGAAGTGCACCTA
. : . : . : . : . : . :
JMSF035I16+ GCCTCTTCTGTTGTTCCCTGCAAGCAATGAGTTTCAAAGTATCATCTACAGAAATAGCTG
JMFF047J19+ GCCTCTTCTGTTGTTCCCTGCAAGCAATGAGTTTCAAAGTATCATCTACAGAAATAGCTG
JMFF015P03+ GCCTCTTCTGTTGTTCCCTGCAAGCAATGAGTTTCAAAGTATCATNTACAGAAATAGCTG
____________________________________________________________
consensus GCCTCTTCTGTTGTTCCCTGCAAGCAATGAGTTTCAAAGTATCATCTACAGAAATAGCTG
. : . : . : . : . : . :
JMSF035I16+ AATGGCCCTGACCAGTTCTCCTGTCTAGCTCCGTAATAAGATAAACCCTACTCTCCGCGT
JMFF047J19+ AATGGCCCTGACCAGTTCTCCTGTCTAGCTCCGTAATAAGATAAACCCTACTCTCCGCGT
JMSF012A18+ GCTCCGTAATAAGATAAACCCTACTCTCCGCGT
JMFF015P03+ AATGGCCCTGACCAGTTCTCCTGTCTAGCTCCGTAATAAGATAAACCCTACTCTCCGCGT
____________________________________________________________
consensus AATGGCCCTGACCAGTTCTCCTGTCTAGCTCCGTAATAAGATAAACCCTACTCTCCGCGT
. : . : . : . : . : . :
JMSF035I16+ CCTGCCACAATCGGCCGGCGACATAAAGAGAAGCCATAGCGGCAAACATAGAGAGCATGA
JMFF047J19+ CCTGCCACAATCGGCCGGCGACATAAAGAGAAGCCATAGCGGCAAACATAGAGAGCATGA
JMSF012A18+ CCTGCCACAATCGGCCGGCGACATAAAGAGAAGCCATAGCGGCAAACATAGAGAGCATGA
JMFF015P03+ CCTGCCACAATCGGCCGGCGACATAAAGAGAAGCCATAGCGGCAAACATAGAGAGCATGA
____________________________________________________________
consensus CCTGCCACAATCGGCCGGCGACATAAAGAGAAGCCATAGCGGCAAACATAGAGAGCATGA
. : . : . : . : . : . :
JMSF035I16+ GAAATGAAATTCGAGATCCGAAACTGGGGCCGGAATAGACCCGACTAGTGGATCCCCGGC
JMFF047J19+ GAAATGAAATTCGAGATCCGAAACTGGGGCCGGAATAGACCCGACTAGTGGATCCCCGGC
JMSF012A18+ GAAATGAAATTCGAGATCCGAAACTGGGGCCGGAATAGACCCGACTAGTGGATCCCCGGC
JMFF015P03+ GAAATGAAATTCGAGATCCGAAACTGGGGCCGGAATAGACCCGACTAGTGGATCCCCGGC
____________________________________________________________
consensus GAAATGAAATTCGAGATCCGAAACTGGGGCCGGAATAGACCCGACTAGTGGATCCCCGGC
. : . : . : . : . : . :
JMSF035I16+ CGGCCATTGCAATCCCCGGCGACGTCGTTTTAGCCTTCAATCTTCCTTAACGGCACC
JMFF047J19+ CGGCCATTGCAATCCCCGGCGACGTCGTTTTAGCCTTCAATCTTCCTTAACGGCACCAGA
JMSF012A18+ CGGCCATTGCAATCCCCGGCGACGTCGTTTTAGCCTTCAATCTTCCTTAACGGCACC
JMFF015P03+ CGGCCATTGCAATCCCCGGCGACGTCGTTTTAGCCTTCAATCTTCCTTAACGGCACCAGA
____________________________________________________________
consensus CGGCCATTGCAATCCCCGGCGACGTCGTTTTAGCCTTCAATCTTCCTTAACGGCACCAGA
. : . : . : . : . : . :
JMFF047J19+ ATTCGATATTTTCCGATCCGGAATCAGCTTTAAAGTGGAGACGTGAGGAGAAGGAACAAT
JMFF015P03+ ATTCGATATTTTCCGATCCGGAATCAGCTTTAAAGTGGAGACGTGAGGAGAAGGAACAAT
____________________________________________________________
consensus ATTCGATATTTTCCGATCCGGAATCAGCTTTAAAGTGGAGACGTGAGGAGAAGGAACAAT