| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012J05 | Sequence | 841 | 000073 (7) | emb|CDP04381.1| | 2e-131 | unnamed protein product [Coffea canephora] | |||||
| JMFF015G07 | Sequence | 614 | 000073 (7) | emb|CDP04381.1| | 1e-88 | unnamed protein product [Coffea canephora] | 625 | 001106 (3) | emb|CDP04381.1| | 8e-81 | unnamed protein product [Coffea canephora] |
| JMFF021M04 | Sequence | 560 | 000073 (7) | emb|CDP04381.1| | 2e-74 | unnamed protein product [Coffea canephora] | 634 | 001106 (3) | emb|CDP04381.1| | 2e-74 | unnamed protein product [Coffea canephora] |
| JMFF035M02 | Sequence | 608 | 000073 (7) | emb|CDP04381.1| | 9e-74 | unnamed protein product [Coffea canephora] | 726 | 001106 (3) | emb|CDP04381.1| | 6e-72 | unnamed protein product [Coffea canephora] |
| JMFF035O08 | Sequence | 644 | 000073 (7) | ref|XP_011096090.1| | 2e-91 | PREDICTED: derlin-2.2 [Sesamum indicum] | |||||
| JMFN036A11 | Sequence | 618 | 000073 (7) | emb|CDP04381.1| | 1e-109 | unnamed protein product [Coffea canephora] | |||||
| JMSF038C18 | Sequence | 770 | 000073 (7) | emb|CDP04381.1| | 3e-131 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF035O08- TTTAGTTTTTTTTAACAAGAAA
rJMFF012J05- TTTTTTTAACAAGAAA
____________________________________________________________
consensus TTTAGTTTTTTTTAACAAGAAA
. : . : . : . : . : . :
rJMFF035O08- AATTTGCTACAGATACTGACAATTGTGCTTCAATAAAGAAAATACATTTACCATCTCAAA
rJMSF038C18- AATTGTGCTTCAATAAAGAAAATACATTTACCATCTCAAA
rJMFF012J05- AATTTGCTACAGATACTGACAATTGTGCTTCAATAAAGAAAATACATTTACCATCTCAAA
____________________________________________________________
consensus AATTTGCTACAGATACTGACAATTGTGCTTCAATAAAGAAAATACATTTACCATCTCAAA
. : . : . : . : . : . :
rJMFF035O08- CTGGCTAACTTCTCATCAATGAGATCATCTATAG-TTTTCTACCAAATATCCCGGTAAAA
rJMSF038C18- CTGGCTAACTTCTCATCAATGAGATCATCTATAGATTTTCTACCAAATATCCCGGTAAAA
rJMFF012J05- CTGGCTAACTTCTCATCAATGAGATCATCTATAG-TTTTCTACCAAATATCCCGGTAAAA
____________________________________________________________
consensus CTGGCTAACTTCTCATCAATGAGATCATCTATAG-TTTTCTACCAAATATCCCGGTAAAA
. : . : . : . : . : . :
rJMFF035O08- TGTACATAAGCAGAGGGAATTTTGAGTATTAGTACATTCAACTCAATACAATCCCCCCAT
rJMSF038C18- TGTACATAAGCAGAGGGAATTTTGAGTATTAGTACATTCAACTCANTACAATCCCCCCAT
rJMFF012J05- TGTACATAAGCAGAGGGAATTTTGAGTATTAGTACATTCAACTCAATACAATCCCCCCAT
____________________________________________________________
consensus TGTACATAAGCAGAGGGAATTTTGAGTATTAGTACATTCAACTCAATACAATCCCCCCAT
. : . : . : . : . : . :
rJMFF035O08- CAATTCTGTTGATCTTCTTCCAGGGGAGGAGCGGCAAATCGGACGTTAGCTGGTCGGGCC
rJMSF038C18- CAATTCTGTTGATCTTCTTCCAGGGGAGGAGCGGCAAATCGGACGTTAGCTGGTCGGGCC
rJMFF012J05- CAATTCTGTTGATCTTCTTCCAGGGGAGGAGCGGCAAATCGGACGTTAGCTGGTCGGGCC
____________________________________________________________
consensus CAATTCTGTTGATCTTCTTCCAGGGGAGGAGCGGCAAATCGGACGTTAGCTGGTCGGGCC
. : . : . : . : . : . :
rJMFF035O08- ATCACTACCGGCTCATCTGCAAACAATGATTTGATAAATCCGGGTGTCCTCAGTGGTCGA
rJMSF038C18- ATCACTACCGGCTCATCTGCAAACAATGATTTGATAAATCCGGGTGTCCTCAGTGGTCGA
rJMFF012J05- ATCACTACCGGCTCATCTGCAAACAATGATTTGATAAATCCGGGTGTCCTCAGTGGTCGA
____________________________________________________________
consensus ATCACTACCGGCTCATCTGCAAACAATGATTTGATAAATCCGGGTGTCCTCAGTGGTCGA
. : . : . : . : . : . :
rJMFF035O08- CGGCCAGTCATCCGTGGATAAACATCCTCAAGAAAATAGTAAGCATGGCCTGCAATCATC
rJMSF038C18- CGGCCAGTCATCCGTGGATAAACATCCTCAAGAAAATAGTAAGCATGGCCTGCAATCATC
rJMFF012J05- CGGCCAGTCATCCGTGGATAAACATCCTCAAGAAAATAGTAAGCATGGCCTGCAATCATC
____________________________________________________________
consensus CGGCCAGTCATCCGTGGATAAACATCCTCAAGAAAATAGTAAGCATGGCCTGCAATCATC
. : . : . : . : . : . :
rJMFF035O08- CCCAATAAATCCACCCAAGCACTAGCACCAACAAGAACGGAGAACCCTAAAAGCACCCAT
rJMSF038C18- CCCAATAAATCCACCCAAGCACTAGCACCAACAAGAACGGAGAACCCTAAAAGCACCCAT
rJMFF012J05- CCCAATAAATCCACCCAAGCACTAGCACCAACAAGAACGGAGAACCCTAAAAGCACCCAT
JMFN036A11+ CAACAAGAACGGAGAACCCTAAAAGCACCCAT
____________________________________________________________
consensus CCCAATAAATCCACCCAAGCACTAGCACCAACAAGAACGGAGAACCCTAAAAGCACCCAT
. : . : . : . : . : . :
rJMFF035O08- GGAAGATAAGCAGCCGTGAAGGTAAAGAGACCCAAAAAGCTCATGTGGATGAAGGGATTT
rJMSF038C18- GGAAGATAAGCAGCCGTGAAGGTAAAGAGACCCAAAAAGCTCATGTGGATGAAGGGATTT
rJMFF012J05- GGAAGATAAGCAGCCGTGAAGGTAAAGAGACCCAAAAAGCTCATGTGGATGAAGGGATTT
JMFN036A11+ GGAAGATAAGCAGCCGTGAAGGTAAAGAGACCCAAAAAGCTCATGTGGATGAAGGGATTT
JMFF035M02+ AAAGGATTT
JMFF015G07+ GGATGAAAGGATTT
____________________________________________________________
consensus GGAAGATAAGCAGCCGTGAAGGTAAAGAGACCCAAAAAGCTCATGTGGATGAAGGGATTT
. : . : . : . : . : . :
rJMFF035O08- TGTTTGCTCCAAACATATACCATCATAAATGTTAGTGAATTGCTAAGAAATATGATCTTT
rJMSF038C18- TGTTTGCTCCAAACATATACCATCATAAATGTTAGTGAATTGCTAAGAAATATGATCTTT
rJMFF012J05- TGTTTGCTCCAAACATATACCATCATAAATGTTAGTGAATTGCTAAGAAATATGATCTTT
JMFN036A11+ TGTTTGCTCCAAACATATACCATCATAAATGTTAGTGAATTGCTAAGAAATATGATCTTT
JMFF035M02+ TGCTTGCTCCAAACATATACCATCATGAATGTTAGTGAATTGCTAAG-AAGATAATCCTT
JMFF021M04+ TGCTAAGAAAGATAATCCTT
JMFF015G07+ TGCTTGCTCCAAACATATACCATCATGAATGTTAGTGAATTGCTAAGAAAGATAATCCTT
____________________________________________________________
consensus TGTTTGCTCCAAACATATACCATCATAAATGTTAGTGAATTGCTAAGAAATATGATCTTT
. : . : . : . : . : . :
rJMFF035O08- GCAAATGACTCTGAGACATAAGGTATCATCCCACCAATAANAACAATTCCAGTTAACACA
rJMSF038C18- GCAAATGACTCTGAGACATAAGGTATCATCCCACCAATANGAACAATTCCAGTTAACACA
rJMFF012J05- GCAAATGACTCTGAGACATAAGGTATCATCCCACCAATAAGAACAATTCCAGTTAACACA
JMFN036A11+ GCAAATGACTCTGAGACATAAGGTATCATCCCACCAATAAGAACAATTCCAGTTAACACA
JMFF035M02+ GCAAATGACTCAGAGACATAGGGTATCATTCCCCCAATAAGAACAATCCCAGTTAAAACA
JMFF021M04+ GCAAATGACTCAGAGACATAGGGTATCATTCCCCCAATAAGAACAATCCCAGTTAAAACA
JMFF015G07+ GCAAATGACTCAGAGACATAGGGTATCATTCCCCCAATAAGAACAATCCCAGTTAAAACA
____________________________________________________________
consensus GCAAATGACTCTGAGACATAAGGTATCATCCCACCAATAAGAACAATTCCAGTTAACACA
. : . : . : . : . : . :
rJMFF035O08- GTGGCTCCAAACAAGAGCATGTA
rJMSF038C18- GTGGCTCCAAACAAGAGCATGTAAAAGAAATCTGCAGTCCTTCCCCTAANAGAGTTCTCT
rJMFF012J05- GTGGCTCCAAACAAGAGCATGTAGAAGAAATCTGCAGTCCTTCCCCTAAAAGAGTTCTCT
JMFN036A11+ GTGGCTCCAAACAAGAGCATGTAGAAGAAATCTGCAGTCCTTCCCCTAAAAGAGTTCTCT
JMFF035M02+ GTGGCTCCAAATAAAAGCATGTACAAGAAATCTGCTGTCCTTCCCCTAAAAGAGTTCTCC
JMFF021M04+ GTGGCTCCAAATAAAAGCATGTACAAGAAATCTGCTGTCCTTCCCCTAAAAGAGTTCTCC
JMFF015G07+ GTGGCTCCAAATAAAAGCATGTACAAGAAATCTGCTGTCCTTCCCCTAAAAGAGTTCTCC
____________________________________________________________
consensus GTGGCTCCAAACAAGAGCATGTAGAAGAAATCTGCAGTCCTTCCCCTAAAAGAGTTCTCT
. : . : . : . : . : . :
rJMSF038C18- TCAAGAAGCTTGCAGTACCGAGCAAGAAAAAACATGTGAAACAGANAGTCCAGGTCCATT
rJMFF012J05- TCAAGAAGCTTGCAGTACCGAGCAAGAAAAAACATGTGAAACAGAAAGTCCAGGTCCATT
JMFN036A11+ TCAAGAAGCTTGCAGTACCGAGCAAGAAAAAACATGTGAAACAGAAAGTCCAGGTCCATT
JMFF035M02+ TCAAGGAGCTTGCAGTATCGAGCAAGAAAAAACATGTGAAACAGGAAGTCCAAATCCATT
JMFF021M04+ TCAAGGAGCTTGCAGTATCGAGCAAGAAAAAACATGTGAAACAGGAAGTCCAAATCCATT
JMFF015G07+ TCAAGGAGCTTGCAGTATCGAGCAAGAAAAAACATGTGAAACAGGAAGTCCAAATCCATT
____________________________________________________________
consensus TCAAGAAGCTTGCAGTACCGAGCAAGAAAAAACATGTGAAACAGAAAGTCCAGGTCCATT
. : . : . : . : . : . :
rJMSF038C18- TTCCGGANNTAAAGAAAGTTGGTAATGAGGCGCCAGAACTGATAATGCTTCACGACCAGT
rJMFF012J05- TTCCGGAAGTAAAGAAAGTTGGTAATGAGGCGCCAGAACTGATAATGCTTCACGACCAGT
JMFN036A11+ TTCCGGAAGTAAAGAAAGTTGGTAATGAGGCGCCAGAACTGATAATGCTTCACGACCAGT
JMFF035M02+ TTCCGGAAGTAGAGAAAGTTGGTGATAAGGCGCCAGAACTCATAATGCTTCACCACCAGC
JMFF021M04+ TTCCGGAAGTAGAGAAAGTTGGTGATAAGGCGCCAGAACTCATAATGCTTCACCACCAGC
JMFF015G07+ TTCCGGAAGTAGAGAAAGTTGGTGATAAGGCGCCAGAACTCATAATGCTTCACCACCAGC
____________________________________________________________
consensus TTCCGGAAGTAAAGAAAGTTGGTAATGAGGCGCCAGAACTGATAATGCTTCACGACCAGT
. : . : . : . : . : . :
rJMSF038C18- TTGGGATTCA
rJMFF012J05- TTGGGATTCAAGTACAAATTGTACGGAGATATAATCTCTAAGG
JMFN036A11+ TTGGGATTCAAGTACAAATTGTACGGAGATATAATCTCTAAGGAACAGCCGATGGTAGTG
JMFF035M02+ TTGGGGTTCAGGTACAAGTTATATGGAGATATTATCTCCAAGGAACAACCGATGGTGGTG
JMFF021M04+ TTGGGGTTCAGGTACAAGTTATATGGAGATATTATCTCCAAGGAACAACCGATGGTGGTG
JMFF015G07+ TTGGGGTTCAGGTACAAGTTATATGGAGATATTATCTCCAAGGAACAACCGATGGTGGTG
____________________________________________________________
consensus TTGGGATTCAGGTACAAGTTGTATGGAGATATTATCTCTAAGGAACAACCGATGGTGGTG
. : . : . : . : . : . :
JMFN036A11+ ACGATGGCGGCGGTGAGGTAGGAACGGGTGATGATCGGCATCTGTTTGTACCATTCCTCT
JMFF035M02+ ACTACGGCGGCGGTGAGGTAGGAGCGAGTAATGACTGGCATCTGCTTGTACCATTCCTCT
JMFF021M04+ ACTACGGCGGCGGTGAGGTAGGAGCGAGTAATGACTGGCATCTGCTTGTACCATTCCTCT
JMFF015G07+ ACTACGGCGGCGGTGAGGTAGGAGCGAGTAATGACTGGCATCTGCTTGTACCATTCCTCT
____________________________________________________________
consensus ACTACGGCGGCGGTGAGGTAGGAGCGAGTAATGACTGGCATCTGCTTGTACCATTCCTCT
. : . : . : . : . : . :
JMFN036A11+ ACTGCTTGCGCCATTTTC
JMFF035M02+ ACTGCTTGCGCCATTTTCCCGGAAAGTTTTCCGATTTCTCGCCAATATTAAACCCCCCCG
JMFF021M04+ ACTGCTTGCGCCATTTTCCCGGAAAGTTTTCCGATTTCTCGCCAATATTAAACCCCCCCG
JMFF015G07+ ACTGCTTGCGCCATTTTCCCGGAAAGTTTTCCGATTTCTCGCCAATATTAAACCCCCCCG
____________________________________________________________
consensus ACTGCTTGCGCCATTTTCCCGGAAAGTTTTCCGATTTCTCGCCAATATTAAACCCCCCCG
. : . : . : . : . : . :
JMFF035M02+ GAAACTTTCGGATAACGAAATAGAGGAACCAAATTTCCGGAATCCGGCCGGCGAATACAA
JMFF021M04+ GAAACTTTCGGATAACGAAATAGAGGAACCAAATTTCCGGAATCCGGCCGGCGAATACAA
JMFF015G07+ GAAACTTTCGGATAACGAAATAGAGGAACCAAATTTCCGGAATCCGGCCGGCGAATACAA
____________________________________________________________
consensus GAAACTTTCGGATAACGAAATAGAGGAACCAAATTTCCGGAATCCGGCCGGCGAATACAA
. : . : . : . : . : . :
JMFF035M02+ GCGTGATTACCAACGACCTCTAACTGAATCAATCAACAAAGATACGTGCATTTACAAA
JMFF021M04+ GCGTGATTACCAACGACCTCTAACTGAATCAATCAACAAAGATACGTGCATTTACAAA
JMFF015G07+ GCGTGATTACCAACGACCTCTAACTGAATCAATCAACAAAGATACGTGCATTTACAAATT
____________________________________________________________
consensus GCGTGATTACCAACGACCTCTAACTGAATCAATCAACAAAGATACGTGCATTTACAAATT