Contig 000066:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014J22Sequence500000066 (5)ref|XP_009615606.1|6e-52PREDICTED: fasciclin-like arabinogalactan protein 1 [Nicotiana tomentosiformis]215008413 (4)
JMFN019K06Sequence642000066 (5)ref|XP_009615606.1|1e-72PREDICTED: fasciclin-like arabinogalactan protein 1 [Nicotiana tomentosiformis]
JMSF001K02Sequence442000066 (5)ref|XP_009615606.1|9e-41PREDICTED: fasciclin-like arabinogalactan protein 1 [Nicotiana tomentosiformis]319008413 (4)
JMSF042M12Sequence719000066 (5)ref|XP_009615606.1|8e-86PREDICTED: fasciclin-like arabinogalactan protein 1 [Nicotiana tomentosiformis]257008413 (4)
JMSF051B17Sequence640000066 (5)ref|XP_009615606.1|1e-73PREDICTED: fasciclin-like arabinogalactan protein 1 [Nicotiana tomentosiformis]266008413 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042M12+ CTC
                      ____________________________________________________________
consensus CTC
 
. : . : . : . : . : . :
JMFN019K06+ TTAGCTT
JMSF042M12+ AGCAGGGGAGCCCAAGAGCGTATCGGCGAACAATTTGCAGCCGTGAGCCGACATTAGCTT
                      ____________________________________________________________
consensus AGCAGGGGAGCCCAAGAGCGTATCGGCGAACAATTTGCAGCCGTGAGCCGACATTAGCTT
 
. : . : . : . : . : . :
JMFN019K06+ AGTGATGTTCGCCTTGCTCGGCTCGGGAGCCGGCGCTTCAGCCGCCGCCGACGGCAGCAC
JMSF051B17+ CTCGGCTCGGGAGCCGGCGCTTCAGCCGCCGCCGACGGCAGCAC
JMSF042M12+ AGTGATGTTCGCCTTGCTCGGCTCGGGAGCCGGCGCTTCAGCCGCCGCCGACGGCAGCAC
                      ____________________________________________________________
consensus AGTGATGTTCGCCTTGCTCGGCTCGGGAGCCGGCGCTTCAGCCGCCGCCGACGGCAGCAC
 
. : . : . : . : . : . :
JMFN019K06+ ACTACTGATATGAATGATGGAAATGTTGTAAGGAATCTCCTCAACGGCCTTGACGAAAGT
JMSF051B17+ ACTACTGATATGAATGATGGAAATGTTGTAAGGAATCTCCTCAACGGCCTTGACGAAAGT
JMSF042M12+ ACTACTGATATGAATGATGGAAATGTTGTAAGGAATCTCCTCAACGGCCTTGACGAAAGT
                      ____________________________________________________________
consensus ACTACTGATATGAATGATGGAAATGTTGTAAGGAATCTCCTCAACGGCCTTGACGAAAGT
 
. : . : . : . : . : . :
JMFN019K06+ TGCGGGGAGTGCTCCTCCGTCGCCCTGAGGGCCGAATCCGACCTTTCCGCCTTTCAGATC
JMSF051B17+ TGCGGGGAGTGCTCCTCCGTCGCCCTGAGGGCCGAATCCGACCTTTCCGCCTTTCAGATC
JMSF042M12+ TGCGGGGAGTGCTCCTCCGTCGCCCTGAGGGCCGAATCCGACCTTTCCGCCTTTCAGATC
JMFF014J22+ ACCTTTCCGCCTTTCAGATC
                      ____________________________________________________________
consensus TGCGGGGAGTGCTCCTCCGTCGCCCTGAGGGCCGAATCCGACCTTTCCGCCTTTCAGATC
 
. : . : . : . : . : . :
JMFN019K06+ TGTGATATTGACGAATCCGGCGGCGCCGGGAGCGGAGCCAGTGGCTTGGAACATAGTGGC
JMSF051B17+ TGTGATATTGACGAATCCGGCGGCGCCGGGAGCGGAGCCAGTGGCTTGGAACATAGTGGC
JMSF042M12+ TGTGATATTGACGAATCCGGCGGCGCCGGGAGCGGAGCCAGTGGCTTGGAACATAGTGGC
JMSF001K02+ AGCGGAGCCAGTGGCTTGGAACATAGTGGC
JMFF014J22+ TGTGATATTGACGAATCCGGCGGCGCCGGGAGCGGAGCCAGTGGCTTGGAACATAGTGGC
                      ____________________________________________________________
consensus TGTGATATTGACGAATCCGGCGGCGCCGGGAGCGGAGCCAGTGGCTTGGAACATAGTGGC
 
. : . : . : . : . : . :
JMFN019K06+ GGCGAGCGCAGTGCCATTGGTGAGCTGGTGGAGCTTCTTCGCGCCGTAGTAGTCCAGGAG
JMSF051B17+ GGCGAGCGCAGTGCCATTGGTGAGCTGGTGGAGCTTCTTCGCGCCGTAGTAGTCCAGGAG
JMSF042M12+ GGCGAGCGCAGTGCCATTGGTGAGCTGGTGGAGCTTCTTCGCGCCGTAGTAGTCCAGGAG
JMSF001K02+ GGCGAGCGCAGTGCCATTGGTGAGCTGGTGGAGCTTCTTCGCGCCGTAGTAGTCCAGGAG
JMFF014J22+ GGCGAGCGCAGTGCCATTGGTGAGCTGGTGGAGCTTCTTCGCGCCGTAGTAGTCCAGGAG
                      ____________________________________________________________
consensus GGCGAGCGCAGTGCCATTGGTGAGCTGGTGGAGCTTCTTCGCGCCGTAGTAGTCCAGGAG
 
. : . : . : . : . : . :
JMFN019K06+ CACATGGAGGGAGAGGACATTCTTAATGGTGTAGATTGAGTGGTGCTTGGCGAGCAGATC
JMSF051B17+ CACATGGAGGGAGAGGACATTCTTAATGGTGTAGATTGAGTGGTGCTTGGCGAGCAGATC
JMSF042M12+ CACATGGAGGGAGAGGACATTCTTAATGGTGTAGATTGAGTGGTGCTTGGCGAGCAGATC
JMSF001K02+ CACATGGAGGGAGAGGACATTCTTAATGGTGTAGATTGAGTGGTGCTTGGCGAGCAGATC
JMFF014J22+ CACATGGAGGGAGAGGACATTCTTAATGGTGTAGATTGAGTGGTGCTTGGCGAGCAGATC
                      ____________________________________________________________
consensus CACATGGAGGGAGAGGACATTCTTAATGGTGTAGATTGAGTGGTGCTTGGCGAGCAGATC
 
. : . : . : . : . : . :
JMFN019K06+ TGCCATGGCGGCGTCATCGACGGCGCAGACAGTGATTGTGTCGCGGCTGTTGATGTCGGC
JMSF051B17+ TGCCATGGCGGCGTCATCGACGGCGCAGACAGTGATTGTGTCGCGGCTGTTGATGTCGGC
JMSF042M12+ TGCCATGGCGGCGTCATCGACGGCGCAGACAGTGATTGTGTCGCGGCTGTTGATGTCGGC
JMSF001K02+ TGCCATGGCGGCGTCATCGACGGCGCAGACAGTGATTGTGTCGCGGCTGTTGATGTCGGC
JMFF014J22+ TGCCATGGCGGCGTCATCGACGGCGCAGACAGTGATTGTGTCGCGGCTGTTGATGTCGGC
                      ____________________________________________________________
consensus TGCCATGGCGGCGTCATCGACGGCGCAGACAGTGATTGTGTCGCGGCTGTTGATGTCGGC
 
. : . : . : . : . : . :
JMFN019K06+ GGCGAGGTGGGTGAGTGATAAGTAGTGGTTGAAGGTAGAGAACTTCTTGTACTTGGCCAG
JMSF051B17+ GGCGAGGTGGGTGAGTGATAAGTAGTGGTTGAAGGTAGAGAACTCCTTGTACTTGGCCAG
JMSF042M12+ GGCGAGGTGGGTGAGTGATAAGTAGTGGTTGAAGGTAGAGAACTCCTTGTACTTGGCCAG
JMSF001K02+ GGCGAGGTGGGTGAGTGATAAGTAGTGGTTGAAGGTAGAGAACTCCTTGTACTTGGCCAG
JMFF014J22+ GGCGAGGTGGGTGAGTGATAAGTAGTGGTTGAAGGTAGAGAACTCCTTGTACTTGGCCAG
                      ____________________________________________________________
consensus GGCGAGGTGGGTGAGTGATAAGTAGTGGTTGAAGGTAGAGAACTCCTTGTACTTGGCCAG
 
. : . : . : . : . : . :
JMFN019K06+ AATGGCGGTAATGTTGTAAGCCTCCGTGGCCGACGGCAGGAGCAACAGCGCCAGAGAGAG
JMSF051B17+ AATGGCGGTAATGTTGTAAGCCTCCGTGGCCGACGGCAGGAGCAACAGCGCCAGAGAGAG
JMSF042M12+ AATGGCGGTAATGTTGTAAGCCTCCGTGGCCGACGGCAGGAGCAACAGCGCCAGAGAGAG
JMSF001K02+ AATGGCGGTAATGTTGTAAGCCTCCGTGGCCGACGGCAGGAGCAACAGCGCCAGAGAGAG
JMFF014J22+ AATGGCGGTAATGTTGTAAGCCTCCGTGGCCGACGGCAGGAGCAACAGCGCCAGAGAGAG
                      ____________________________________________________________
consensus AATGGCGGTAATGTTGTAAGCCTCCGTGGCCGACGGCAGGAGCAACAGCGCCAGAGAGAG
 
. : . : . : . : . : . :
JMFN019K06+ GAACACCGCGGCCGCGGCTGCCGGCGGCGGGAAAAGCTGCATTTTAGCTGTGGGTGTGGA
JMSF051B17+ GAACACCGCGGCCGCGGCTGCCGGCGGCGGGAAAAGCTGCATTTTAGCTGTGGGTGTGGA
JMSF042M12+ GAACACCGCGGCCGCGGCTGCCGGCGGCGGGAAAAGCTGCATTTTAGCTGTGGGTGTGGA
JMSF001K02+ GAACACCGCGGCCGCGGCTGCCGGCGGCGGGAAAAGCTGCATTTTAGCTGTGGGTGTGGA
JMFF014J22+ GAACACCGCGGCCGCGGCTGCCGGCGGCGGGAAAAGCTGCATTTTAGCTGTGGGTGTGGA
                      ____________________________________________________________
consensus GAACACCGCGGCCGCGGCTGCCGGCGGCGGGAAAAGCTGCATTTTAGCTGTGGGTGTGGA
 
. : . : . : . : . : . :
JMFN019K06+ AAGAAGACGGGACAGGGGTTCCAATACCGGTGGAG
JMSF051B17+ AAGAAGACGGGACAGGGGTTCCAATACCGGTGGAGGGGCTGAGAC
JMSF042M12+ AAGAAGACGGGACAGGGGTTCCAATACCGGTGGAGGGGCTGAGAC
JMSF001K02+ AAGAAGACGGGACAGGGGTTCCAATACCGGTGGAGGGGCTGAGAC
JMFF014J22+ AAGAAGACGGGACAGGGGTTCCAATACCGGTGGAGGGGCTGAGACTGCGACTCGCAGAGT
                      ____________________________________________________________
consensus AAGAAGACGGGACAGGGGTTCCAATACCGGTGGAGGGGCTGAGACTGCGACTCGCAGAGT