| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012P04 | Sequence | 560 | 000060 (6) | ref|XP_006366693.1| | 4e-32 | PREDICTED: receptor-like protein kinase HSL1-like [Solanum tuberosum] | 724 | 004355 (3) | ref|XP_009779466.1| | 6e-59 | PREDICTED: receptor-like protein kinase HSL1 [Nicotiana sylvestris] |
| JMFF036L20 | Sequence | 585 | 000060 (6) | ref|XP_006366693.1| | 2e-36 | PREDICTED: receptor-like protein kinase HSL1-like [Solanum tuberosum] | 622 | 004355 (3) | ref|XP_009587881.1| | 4e-38 | PREDICTED: receptor-like protein kinase HSL1 [Nicotiana tomentosiformis] |
| JMFS017D11 | Sequence | 599 | 000060 (6) | ref|XP_006366693.1| | 8e-43 | PREDICTED: receptor-like protein kinase HSL1-like [Solanum tuberosum] | |||||
| JMFS023G12 | Sequence | 561 | 000060 (6) | ref|XP_006366693.1| | 5e-43 | PREDICTED: receptor-like protein kinase HSL1-like [Solanum tuberosum] | |||||
| JMFS160D06 | Sequence | 581 | 000060 (6) | ref|XP_006366693.1| | 4e-41 | PREDICTED: receptor-like protein kinase HSL1-like [Solanum tuberosum] | |||||
| JMSF041C03 | Sequence | 274 | 000060 (6) | 536 | 004355 (3) | ref|XP_011093340.1| | 2e-13 | PREDICTED: LOW QUALITY PROTEIN: receptor-like protein kinase HSL1 [Sesamum indi | |||
This contig is upended
. : . : . : . : . : . :
JMFS023G12+ CCGGTCAATGTCGGAAGGAATGGG
JMFS160D06+ GAAGGAATGGG
JMFS017D11+ CCGGTCAATGTCGGAAGGAATGGG
____________________________________________________________
consensus CCGGTCAATGTCGGAAGGAATGGG
. : . : . : . : . : . :
JMFS023G12+ GCCCACGAAGAAGTTCTGAGAGAGGTCCAAGTACTCCAGCTTCGAGCAGTTATACAAACC
JMFS160D06+ GCCCACGAAGAAGTTCTGAGAGAGGTCCAAGTACTCCAGCTTCGAGCAGTTATACAAACC
JMFS017D11+ GCCCACGAAGAAGTTCTGAGAGAGGTCCAAGTACTCCAGCTTCGAGCAGTTATACAAACC
JMFF036L20+ TCTGAGAGAGGTCCAAGTACTCCAGCTTCGAGCAGTTATACAAACC
JMFF012P04+ CTTCGAGCAGTTATACAAACC
____________________________________________________________
consensus GCCCACGAAGAAGTTCTGAGAGAGGTCCAAGTACTCCAGCTTCGAGCAGTTATACAAACC
. : . : . : . : . : . :
JMFS023G12+ CGTCGGAAAATTGTTCGGAATATAATTCAAGGAAAGATCGAGGGCGGTGAGATTTTTAAG
JMFS160D06+ CGTCGGAAAATTGTTCGGAATATAATTCAAGGAAAGATCGAGGGCGGTGAGATTTTTAAG
JMFS017D11+ CGTCGGAAAATTGTTCGGAATATAATTCAAGGAAAGATCGAGGGCGGTGAGATTTTTAAG
JMFF036L20+ CGTCGGAAAATTGTTCGGAATATAATTCAAGGAAAGATCGAGGGCGGTGAGATTTTTAAG
JMFF012P04+ CGTCGGAAAATTGTTCGGAATATAATTCAAGGAAAGATCGAGGGCGGTGAGATTTTTAAG
____________________________________________________________
consensus CGTCGGAAAATTGTTCGGAATATAATTCAAGGAAAGATCGAGGGCGGTGAGATTTTTAAG
. : . : . : . : . : . :
JMFS023G12+ GCCGCAAATATTGGCCGGAATTTCCGACACGATGTCATACTCCTTTAAAAAGATTCCGGT
JMFS160D06+ GCCGCAAATATTGGCCGGAATTTCCGACACGATGTCATACTCCTTTAAAAAGATTCCGGT
JMFS017D11+ GCCGCAAATATTGGCCGGAATTTCCGACACGATGTCATACTCCTTTAAAAAGATTCCGGT
JMFF036L20+ GCCGCAAATATTGGCCGGAATTTCCGACACGATGTCATACTCCTTTAAAAAGATTCCGGT
JMFF012P04+ GCCGCAAATATTGGCCGGAATTTCCGACACGATGTCATACTCCTTTAAAAAGATTCCGGT
____________________________________________________________
consensus GCCGCAAATATTGGCCGGAATTTCCGACACGATGTCATACTCCTTTAAAAAGATTCCGGT
. : . : . : . : . : . :
JMFS023G12+ GACGGAGCCGCCGGAGCACTCAATCTCCGGCCAGCTACACGGCGAGGAGGTGGCGTTCCA
JMFS160D06+ GACGGAGCCGCCGGAGCACTCAATCTCCGGCCAGCTACACGGCGAGGAGGTGGCGTTCCA
JMFS017D11+ GACGGAGCCGCCGGAGCACTCAATCTCCGGCCAGCTACACGGCGAGGAGGTGGCGTTCCA
JMFF036L20+ GACGGAGCCGCCGGAGCACTCAATCTCCGGCCAGCTACACGGCGAGGAGGTGGCGTTCCA
JMFF012P04+ GACGGAGCCGCCGGAGCACTCAATCTCCGGCCAGCTACACGGCGAGGAGGTGGCGTTCCA
____________________________________________________________
consensus GACGGAGCCGCCGGAGCACTCAATCTCCGGCCAGCTACACGGCGAGGAGGTGGCGTTCCA
. : . : . : . : . : . :
JMFS023G12+ TCCTTCAAGAGACGGCGGATTACCCCACCGCCGTTTCACCTCCAATAAGATATCACGGTC
JMFS160D06+ TCCTTCAAGAGACGGCGGATTACCCCACCGCCGTTTCACCTCCAATAAGATATCACGGTC
JMFS017D11+ TCCTTCAAGAGACGGCGGATTACCCCACCGCCGTTTCACCTCCAATAAGATATCACGGTC
JMFF036L20+ TCCTTCAAGAGACGGCGGATTACCCCACCGCCGTTTCACCTCCAATAAGATATCACGGTC
JMFF012P04+ TCCTTCAAGAGACGGCGGATTACCCCACCGCCGTTTCACCTCCAATAAGATATCACGGTC
____________________________________________________________
consensus TCCTTCAAGAGACGGCGGATTACCCCACCGCCGTTTCACCTCCAATAAGATATCACGGTC
. : . : . : . : . : . :
JMFS023G12+ GGTCACCGGAGATTGCGAAATCACCGCAAAGGGCATTAAGGAAAAGAGAAACAGGAAAAG
JMFS160D06+ GGTCACCGGAGATTGCGAAATCACCGCAAAGGGCATTAAGGAAAAGAGAAACAGGAAAAG
JMFS017D11+ GGTCACCGGAGATTGCGAAATCACCGCAAAGGGCATTAAGGAAAAGAGAAACAGGAAAAG
JMFF036L20+ GGTCACCGGAGATTGCGAAATCACCGCAAAGGGCATTAAGGAAAAGAGAAACAGGAAAAG
JMSF041C03+ CAAAGGGCATTAAGGAAAAGAGAAACAGGAAAAG
JMFF012P04+ GGTCACCGGAGATTGCGAAATCACCGCAAAGGGCATTAAGGAAAAGAGAAACAGGAAAAG
____________________________________________________________
consensus GGTCACCGGAGATTGCGAAATCACCGCAAAGGGCATTAAGGAAAAGAGAAACAGGAAAAG
. : . : . : . : . : . :
JMFS023G12+ ATAAGACGGAAATATGGAAAAGCACCGGAGTAAATTCGTCATTTTCCTAGTCAAACGGCG
JMFS160D06+ ATAAGACGGAAATATGGAAAAGCACCGGAGTAAATTCGTCATTTTCCTAGTCAAACGGCG
JMFS017D11+ ATAAGACGGAAATATGGAAAAGCACCGGAGTAAATTCGTCATTTTCCTAGTCAAACGGCG
JMFF036L20+ ATAAGACGGAAATATGGAAAAGCACCGGAGTAAATTCGTCATTTTCCTAGTCAAACGGCG
JMSF041C03+ ATAAGACGGAAATATGGAAAAGCACCGGAGTAAATTNGTCATTTTCCTAGTCAAACGGCG
JMFF012P04+ ATAAGACGGAAATATGGAAAAGCACCGGAGTAAATTCGTCATTTTCCTAGTCAAACGGCG
____________________________________________________________
consensus ATAAGACGGAAATATGGAAAAGCACCGGAGTAAATTCGTCATTTTCCTAGTCAAACGGCG
. : . : . : . : . : . :
JMFS023G12+ GTTAACAGTGATGGAGGGAAAGAAAGGCAGTTGAGATTTTCGACTTCCCGGCCAAAGGTC
JMFS160D06+ GTTAACAGTGATGGAGGGAAAGAAAGGCAGTTGAGATTTTCGACTTCCCGGCCAAAGGTC
JMFS017D11+ GTTAACAGTGATGGAGGGAAAGAAAGGCAGTTGAGATTTTCGACTTCCCGGCCAAAGGTC
JMFF036L20+ GTTAACAGTGATGGAGGGAAAGAAAGGCAGTTGAGATTTTCGACTTCCCGGCCAAAGGTC
JMSF041C03+ GTTNACAGTGATGGAGGGAAAGAAAGGCAGTTGAGATTTTCGACTTCCCGGCCAAAGGTC
JMFF012P04+ GTTAACAGTGATGGAGGGAAAGAAAGGCAGTTGAGATTTTCGACTTCCCGGCCAAAGGTC
____________________________________________________________
consensus GTTAACAGTGATGGAGGGAAAGAAAGGCAGTTGAGATTTTCGACTTCCCGGCCAAAGGTC
. : . : . : . : . : . :
JMFS023G12+ CGGTAAAGTAATCGTTAAAACGTCAAAGAGTTGGTCAACATTGGAGTGTCACTGTGG
JMFS160D06+ CGGTAAAGTAATCGTTAAAACGTCAAAGAGTTGGTCAACATTGGAGTGTCACTGTGGCGC
JMFS017D11+ CGGTAAAGTAATCGTTAAAACGTCAAAGAGTTGGTCAACATTGGAGTGTCACTGTGGCGC
JMFF036L20+ CGGTAAAGTAATCGTTAAAACGTCAAAGAGTTGGTCAACATTGGAGTGTCACTGTGGCGC
JMSF041C03+ CGGTAAAGTNATCGTTAAAACGTCAAAGAGTTGGTCAACATTGGAGTGTCACTGTGGCGC
JMFF012P04+ CGGTAAAGTAATCGTTAAAACGTCAAAGAGTTGGTCAACATTGGAGTGTCACTGTGGCGC
____________________________________________________________
consensus CGGTAAAGTAATCGTTAAAACGTCAAAGAGTTGGTCAACATTGGAGTGTCACTGTGGCGC
. : . : . : . : . : . :
JMFS160D06+ ACGGAGTACGAGAAAGAGAGA-GAGACAGCT
JMFS017D11+ ACGGAGTACGAGAAAGAGAGA-GAGACAGCT
JMFF036L20+ ACGGAGTACGAGAAAGAGAGA-GAGACAGCTATATAAATGACAACTGAAGGGTCAGT
JMSF041C03+ ACGGAGTACGAGAAAGAGAGATGAGACAGCTATATAAANGACAACTGAAGGNTCAGT
JMFF012P04+ ACGGAGTACGAGAAAGAGAGA-GAGACAGCTATATAAATGACAACTGAAGGGTCAGTACT
____________________________________________________________
consensus ACGGAGTACGAGAAAGAGAGA-GAGACAGCTATATAAATGACAACTGAAGGGTCAGTACT