Contig 000059:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012M03Sequence563000059 (10)ref|XP_004247809.1|1e-91PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Sol299020163
JMFF018B21Sequence591000059 (10)ref|XP_004247809.1|1e-91PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Sol730000059 (10)ref|XP_004247809.1|8e-91PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Sol
JMFF032J04Sequence589000059 (10)ref|XP_004247809.1|1e-91PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Sol692000059 (10)ref|XP_004247809.1|5e-91PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Sol
JMFF044A03Sequence611000059 (10)ref|XP_004247809.1|2e-91PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Sol621000059 (10)ref|XP_004247809.1|1e-91PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Sol
JMFF049A19Sequence528000059 (10)ref|XP_004247809.1|9e-91PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Sol555000059 (10)ref|XP_004247809.1|5e-60PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Sol
JMFS071G10Sequence627000059 (10)ref|XP_004247809.1|2e-91PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Sol

Alignment

This contig is upended


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rJMFF049A19-                                                               CCTTATG
                      ____________________________________________________________
consensus                                                                  CCTTATG
 
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rJMFF049A19-          GCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTGATCCAGTAAGAAGAGTATAATTATA
rJMFF018B21-                                           TGATCCAGTAAGAAGAGTATAATTATA
                      ____________________________________________________________
consensus             GCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTGATCCAGTAAGAAGAGTATAATTATA
 
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rJMFF049A19-          CTCCCAAATCTCATGAGAATACGTTAAATTATTTTAAAAGAAAACTACACGGTTGTTTTG
rJMFF018B21-          CTCCCAAATCTCATGAGAATACGTTAAATTATTTTAAAAGAAAACTACACGGTTGTTTTG
JMFS071G10+                                              AAAAGAAAACTACACGGTTGTTTTG
rJMFF044A03-                AATCTCATGAGAATACGTTAAATTATTTTAAAAGAAAACTACACGGTTGTTTTG
rJMFF032J04-                AATCTCATGAGAATACGTTAAATTATTTTAAAAGAAAACTACACGGTTGTTTTG
                      ____________________________________________________________
consensus             CTCCCAAATCTCATGAGAATACGTTAAATTATTTTAAAAGAAAACTACACGGTTGTTTTG
 
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rJMFF049A19-          AACAATTTGAACACAAGTCGAAGGTACATTATTACTTGCGCGCCCAAAGACAGCACATAC
rJMFF018B21-          AACAATTTGAACACAAGTCGAAGGTACATTATTACTTGCGCGCCCAAAGACAGCACATAC
JMFS071G10+           AACAATTTGAACACAAGTCGAAGGTACATTATTACTTGCGCGCCCAAAGACAGCACATAC
rJMFF044A03-          AACAATTTGAACACAAGTCGAAGGTACATTATTACTTGCGCGCCCAAAGACAGCACATAC
JMFF018B21+                                                GCGCGCCCAAAGACAGCACATAC
rJMFF032J04-          AACAATTTGAACACAAGTCGAAGGTACATTATTACTTGCGCGCCCAAAGACAGCACATAC
JMFF032J04+                                                  GCGCCCAAAGACAGCACATAC
JMFF044A03+                             CGAAGGTACATTATTACTTGCGCGCCCAAAGACAGCACATAC
                      ____________________________________________________________
consensus             AACAATTTGAACACAAGTCGAAGGTACATTATTACTTGCGCGCCCAAAGACAGCACATAC
 
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rJMFF049A19-          TGCAATGACTGGAACATGATTGCTGTTGCTTCTGCACATCCAGCAGGATAGTATAAGATC
rJMFF018B21-          TGCAATGACTGGAACATGATTGCTGTTGCTTCTGCACATCCAGCAGGATAGTATAAGATC
JMFS071G10+           TGCAATGACTGGAACATGATTGCTGTTGCTTCTGCACATCCAGCAGGATAGTATAAGATC
rJMFF044A03-          TGCAATGACTGGAACATGATTGCTGTTGCTTCTGCACATCCNGCAGGATAGTATAAGATC
JMFF018B21+           TGCAATGACTGGAACATGATTGCTGTTGCTTCTGCACATCCAGCAGGATAGTATAAGATC
rJMFF032J04-          TGCAATGACTGGAACATGATTGCTGTTGCTTCTGCACATCCAGCAGGATAGTATAAGATC
JMFF032J04+           TGCAATGACTGGAACATGATTGCTGTTGCTTCTGCACATCCAGCAGGATAGTATAAGATC
JMFF049A19+                                                                  AGATC
JMFF044A03+           TGCAATGACTGGAACATGATTGCTGTTGCTTCTGCACATCCAGCAGGATAGTATAAGATC
JMFF012M03+                                                ATCCAGCAGGATAGTATAAGATC
                      ____________________________________________________________
consensus             TGCAATGACTGGAACATGATTGCTGTTGCTTCTGCACATCCAGCAGGATAGTATAAGATC
 
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rJMFF049A19-          TTACCAGACATCAGGTCGAAGCTCTCCGGTAGCTGGGGGCATCCATCTCCCCGAGTTGTA
rJMFF018B21-          TTACCAGACATCAGGTCGAAGCTCTCCGGTAGCTGGGGGCATCCATCTCCCCGAGTTGTA
JMFS071G10+           TTACCAGACATCAGGTCGAAGCTCTCCGGTAGCTGGGGGCATCCATCTCCCCGAGTTGTA
rJMFF044A03-          TTACCAGACATCAGGTCGAAGCTCTCCGGTAGCTGGGGGCATCCATCTCCCCGAGTTGTA
JMFF018B21+           TTACCAGACATCAGGTCGAAGCTCTCCGGTAGCTGGGGGCATCCATCTCCCCGAGTTGTA
rJMFF032J04-          TTACCAGACATCAGGTCGAAGCTCTCCGGTAGCTGGGGGCATCCATCTCCCCGAGTTGTA
JMFF032J04+           TTACCAGACATCAGGTCGAAGCTCTCCGGTAGCTGGGGGCATCCATCTCCCCGAGTTGTA
JMFF049A19+           TTACCAGACATCAGGTCGAAGCTCTCCGGTAGCTGGGGGCATCCATCTCCCCGAGTNGTA
JMFF044A03+           TTACCAGACATCAGGTCGAAGCTCTCCGGTAGCTGGGGGCATCCATCTCCCCGAGTTGTA
JMFF012M03+           TTACCAGACATCAGGTCGAAGCTCTCCGGTAGCTGGGGGCATCCATCTCCCCGAGTTGTA
                      ____________________________________________________________
consensus             TTACCAGACATCAGGTCGAAGCTCTCCGGTAGCTGGGGGCATCCATCTCCCCGAGTTGTA
 
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rJMFF049A19-          CACACTCTCGCCCACTTTCCAACCAGGAACATCCTTCATAATTCTCGCCTCTTCTTCTAG
rJMFF018B21-          CACACTCTCGCCCACTTTCCAACCAGGAACATCCTTCATAATTCTCGCCTCTTCTTCTAG
JMFS071G10+           CACACTCTCGCCCACTTTCCAACCAGGAACATCCTTCATAATTCTCGCCTCTTCTTCTAG
rJMFF044A03-          CACACTCTCGCCCACTTTCCAACCAGGAACATCCTTCATAATTCTCGCCTCTTCTTCTAG
JMFF018B21+           CACACTCTCGCCCACTTTCCAACCAGGAACATCCTTCATAATTCTCGCCTCTTCTTCTAG
rJMFF032J04-          CACACTCTCGCCCACTTTCCAACCAGGAACATCCTTCATAATTCTCGCCTCTTCTTCTAG
JMFF032J04+           CACACTCTCGCCCACTTTCCAACCAGGAACATCCTTCATAATTCTCGCCTCTTCTTCTAG
JMFF049A19+           CACACTCTCGCCCACTTTCCAACCAGGAACATCCTTCATAATTCTCGCCTCTTCTTCTAG
JMFF044A03+           CACACTCTCGCCCACTTTCCAACCAGGAACATCCTTCATAATTCTCGCCTCTTCTTCTAG
JMFF012M03+           CACACTCTCGCCCACTTTCCAACCAGGAACATCCTTCATAATTCTCGCCTCTTCTTCTAG
                      ____________________________________________________________
consensus             CACACTCTCGCCCACTTTCCAACCAGGAACATCCTTCATAATTCTCGCCTCTTCTTCTAG
 
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rJMFF049A19-          ATACTTCCTCCATTCTTTGACAAATCTTTCATCCTCTTCAGCTTGTAACATGGGAGTTAT
rJMFF018B21-          ATACTTCCTCCATTCTTTGACAAATCTTTCATCCTCTTCAGCTTGTAACATGGGAGTTAT
JMFS071G10+           ATACTTCCTCCATTCTTTGACAAATCTTTCATCCTCTTCAGCTTGTAACATGGGAGTTAT
rJMFF044A03-          ATACTTCCTCCATTCTTTGACAAATCTTTCATCCTCTTCAGCTTGTAACATGGGAGTTAT
JMFF018B21+           ATACTTCCTCCATTCTTTGACAAATCTTTCATCCTCTTCAGCTTGTAACATGGGAGTTAT
rJMFF032J04-          ATACTTCCTCCATTCTTTGACAAATCTTTCATCCTCTTCAGCTTGTAACATGGGAGTTAT
JMFF032J04+           ATACTTCCTCCATTCTTTGACAAATCTTTCATCCTCTTCAGCTTGTAACATGGGAGTTAT
JMFF049A19+           ATACTTCCTCCATTCTTTGACAAATCTTTCATCCTCTTCAGCTTGTAACATGGGAGTTAT
JMFF044A03+           ATACTTCCTCCATTCTTTGACAAATCTTTCATCCTCTTCAGCTTGTAACATGGGAGTTAT
JMFF012M03+           ATACTTCCTCCATTCTTTGACAAATCTTTCATCCTCTTCAGCTTGTAACATGGGAGTTAT
                      ____________________________________________________________
consensus             ATACTTCCTCCATTCTTTGACAAATCTTTCATCCTCTTCAGCTTGTAACATGGGAGTTAT
 
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rJMFF049A19-          GGCTCTTCGAGCAGCATATTTTTCTTCCTTTATTGCCCTACGCTTCTTGTTGCCTTGGCC
rJMFF018B21-          GGCTCTTCGAGCAGCATATTTTTCTTCCTTTATTGCCCTACGCTTCTTGTTGCCTTGGCC
JMFS071G10+           GGCTCTTCGAGCAGCATATTTTTCTTCCTTTATTGCCCTACGCTTCTTGTTGCCTTGGCC
rJMFF044A03-          GGCTCTTCGAGCAGCATATTTTTCTTCCTTTATTGCCCTACGCTTCTTGTTGCCTTGGCC
JMFF018B21+           GGCTCTTCGAGCAGCATATTTTTCTTCCTTTATTGCCCTACGCTTCTTGTTGCCTTGGCC
rJMFF032J04-          GGCTCTTCGAGCAGCATATTTTTCTTCCTTTATTGCCCTACGCTTCTTGTTGCCTTGGCC
JMFF032J04+           GGCTCTTCGAGCAGCATATTTTTCTTCCTTTATTGCCCTACGCTTCTTGTTGCCTTGGCC
JMFF049A19+           GGCTCTTCGAGCAGCATATTTTTCTTCCTTTATTGCCCTACGCTTCTTGTTGCCTTGGCC
JMFF044A03+           GGCTCTTCGAGCAGCATATTTTTCTTCCTTTATTGCCCTACGCTTCTTGTTGCCTTGGCC
JMFF012M03+           GGCTCTTCGAGCAGCATATTTTTCTTCCTTTATTGCCCTACGCTTCTTGTTGCCTTGGCC
                      ____________________________________________________________
consensus             GGCTCTTCGAGCAGCATATTTTTCTTCCTTTATTGCCCTACGCTTCTTGTTGCCTTGGCC
 
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rJMFF049A19-          GACCTGGTACATGCCCCAAGAGAAGGTGCCTAAAGCAGTGAGGAAAATGGCCATGGCGCT
rJMFF018B21-          GACCTGGTACATGCCCCAAGAGAAGGTGCCTAAAGCAGTGAGGAAAATGGCCATGGCGCT
JMFS071G10+           GACCTGGTACATGCCCCAAGAGAAGGTGCCTAAAGCAGTGAGGAAAATGGCCATGGCGCT
rJMFF044A03-          GACCTGGTACATGCCCCAAGAGAAGGTGCCTAAAGCAGTGAGGAAAATGGCCATGGCGCT
JMFF018B21+           GACCTGGTACATGCCCCAAGAGAAGGTGCCTAAAGCAGTGAGGAAAATGGCCATGGCGCT
rJMFF032J04-          GACCTGGTACATGCCCCAAGAGAAGGTGCCTAAAGCAGTGAGGAAAATGGCCATGGCGCT
JMFF032J04+           GACCTGGTACATGCCCCAAGAGAAGGTGCCTAAAGCAGTGAGGAAAATGGCCATGGCGCT
JMFF049A19+           GACCTGGTACATGCCCCAAGAGAAGGTGCCTAAAGCAGTGAGGAAAATGGCCATGGCGCT
JMFF044A03+           GACCTGGTACATGCCCCAAGAGAAGGTGCCTAAAGCAGTGAGGAAAATGGCCATGGCGCT
JMFF012M03+           GACCTGGTACATGCCCCAAGAGAAGGTGCCTAAAGCAGTGAGGAAAATGGCCATGGCGCT
                      ____________________________________________________________
consensus             GACCTGGTACATGCCCCAAGAGAAGGTGCCTAAAGCAGTGAGGAAAATGGCCATGGCGCT
 
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rJMFF049A19-          GGGGCCAG                                                    
rJMFF018B21-          GGGGCCAGTGTTGGGAATTCGGCGGGCGAACCTGACCGGAGCGAAACCTCCGGGCGGAGG
JMFS071G10+           GGGGCCAGTGTTGGGAATTCGGCGGGCGAACCTGACCGGAGCGAAACCTCCGGGCGGAGG
rJMFF044A03-          GGGGCCAGTGTTGGGAATTCGGCGGGCGAACCTGACCGGAGCGAAACCTCCGGGCGGAGG
JMFF018B21+           GGGGCCAGTGTTGGGAATTCGGCGGGCGAACCTGACCGGAGCGAAACCTCCGGGCGGAGG
rJMFF032J04-          GGGGCCAGTGTTGGGAATTCGGCGGGCGAACCTGACCGGAGCGAAACCTCCGGGCGGAGG
JMFF032J04+           GGGGCCAGTGTTGGGAATTCGGCGGGCGAACCTGACCGGAGCGAAACCTCCGGGCGGAGG
JMFF049A19+           GGGGCCAGTGTTGGGAATTCGGCGGGCGAACCTGACGGGAGCGAAACCTCCGGGCGGAGG
JMFF044A03+           GGGGCCAGTGTTGGGAATTCGGCGGGCGAACCTGACCGGAGCGAAACCTCCGGGCGGAGG
JMFF012M03+           GGGGCCAGTGTTGGGAATTCGGCGGGCGAACCTGACCGGAGCGAAACCTCCGGGCGGAGG
                      ____________________________________________________________
consensus             GGGGCCAGTGTTGGGAATTCGGCGGGCGAACCTGACCGGAGCGAAACCTCCGGGCGGAGG
 
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rJMFF018B21-          TCCGTCTTGTAGAAGCGGCATGTCCTTCACGCTGGCCATGCCCGGCTTCTTCCTTATCAT
JMFS071G10+           TCCGTCTTGTAGAAGCGGCATGTCCTTCACGCTGGCCATGCCCGGCTTCTTCCTTATCAT
rJMFF044A03-          TCCGTCTTGTAGAAGCGGCATGTCCTTCACGCTGGCCATGCCCGGCTTCTTCCTTATCAT
JMFF018B21+           TCCGTCTTGTAGAAGCGGCATGTCCTTCACGCTGGCCATGCCCGGCTTCTTCCTTATCAT
rJMFF032J04-          TCCGTCTTGTAGAAGCGGCATGTCCTTCACGCTGGCCATGCCCGGCTTCTTCCTTATCAT
JMFF032J04+           TCCGTCTTGTAGAAGCGGCATGTCCTTCACGCTGGCCATGCCCGGCTTCTTCCTTATCAT
JMFF049A19+           TCCGTCTTGTAGAAGCGGCATGTCCTTCACGCTGGCCATGCCCGGCTTCTTCCTTATCAT
JMFF044A03+           TCCGTCTTGTAGAAGCGGCATGTCCTTCACGCTGGCCATGCCCGGCTTCTTCCTTATCAT
JMFF012M03+           TCCGTCTTGTAGAAGCGGCATGTCCTTCACGCTGGCCATGCCCGGCTTCTTCCTTATCAT
                      ____________________________________________________________
consensus             TCCGTCTTGTAGAAGCGGCATGTCCTTCACGCTGGCCATGCCCGGCTTCTTCCTTATCAT
 
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rJMFF018B21-          TGCCTCCGTCATCTTTGATCTGTGATCTCCCTCAACAATGGAGGAGCTACAAAACTATAA
JMFS071G10+           TGCCTCCGTCATCTTTGATCTGTGATCTCCCTCAACAATGGAGGAGCTACAAAACTATAA
rJMFF044A03-          TGCCTCCGTCATCTTTGATC                                        
JMFF018B21+           TGCCTCCGTCATCTTTGATCTGTGATCTCCCTCAACAATGGAGGAGCTACAAAACTATAA
rJMFF032J04-          TGCCTCCGTCATCTTTGATCTGTGATCTCCCTCAACAATGGAGGAGCTACAAAACTATAA
JMFF032J04+           TGCCTCCGTCATCTTTGATCTGTGATCTCCCTCAACAATGGAGGAGCTACAAAACTATAA
JMFF049A19+           TGCCTCCGTCATCTTTGATCTGTGATCTCCCTCAACAATGGAGGAGCTACAAAACTATAA
JMFF044A03+           TGCCTCCGTCATCTTTGATCTGTGATCTCCCTCAACAATGGAGGAGCTACAAAACTATAA
JMFF012M03+           TGCCTCCGTCATCTTTGATCTGTGATCTCCCTCAACAATGGAGGAGCTACAAAACTATAA
                      ____________________________________________________________
consensus             TGCCTCCGTCATCTTTGATCTGTGATCTCCCTCAACAATGGAGGAGCTACAAAACTATAA
 
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rJMFF018B21-          ACGACTATAGG                                                 
JMFS071G10+           AC                                                          
JMFF018B21+           ACGACTATAGGTGCCTGGGGTGAGT                                   
rJMFF032J04-          ACGACTATAGGTGCCTGGGGTGAGTGAC                                
JMFF032J04+           ACGACTATAGGTGCCTGGGGTGAGTGAC                                
JMFF049A19+           ACGACTATAGGTGCCTGGGGTGAGTGAC                                
JMFF044A03+           ACGACTATAGGTGCCTGGGGTGAGTGAC                                
JMFF012M03+           ACGACTATAGGTGCCTGGGGTGAGTGACACAGAGTTGAGAGGGAAACTCGATAGATTAAC
                      ____________________________________________________________
consensus             ACGACTATAGGTGCCTGGGGTGAGTGACACAGAGTTGAGAGGGAAACTCGATAGATTAAC