Contig 000055:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012E23Sequence544000055 (14)ref|XP_004252209.1|7e-25PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Solanum lycopersicum] 739011808 (3)ref|XP_010910799.1|2e-47PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X2 [Elaeis guine
JMFF020N20Sequence538000055 (14)ref|XP_004252209.1|6e-25PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Solanum lycopersicum] 708011808 (3)ref|XP_010910799.1|1e-47PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X2 [Elaeis guine
JMFF026G09Sequence569000055 (14)ref|XP_009610912.1|1e-28PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana tomentosifor780011077 (2)ref|XP_009610912.1|5e-04PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana tomentosifor
JMFF042P08Sequence640000055 (14)ref|XP_009610912.1|6e-29PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana tomentosifor
JMFS013D01Sequence576000055 (14)emb|CDP02093.1|7e-34unnamed protein product [Coffea canephora]
JMFS020D08Sequence642000055 (14)ref|XP_009610912.1|3e-34PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana tomentosifor
JMFS035G02Sequence496000055 (14)ref|XP_004304637.1|2e-15PREDICTED: DEAD-box ATP-dependent RNA helicase 14 isoform X1 [Fragaria vesca su
JMFS045G03Sequence513000055 (14)ref|XP_010694508.1|4e-12PREDICTED: ATP-dependent RNA helicase-like protein DB10 isoform X1 [Beta vulgar
JMFS103B06Sequence560000055 (14)ref|XP_009610912.1|8e-29PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana tomentosifor
JMFS151B03Sequence624000055 (14)ref|XP_009610912.1|6e-30PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana tomentosifor
JMFS158E01Sequence437000055 (14)emb|CDP02093.1|6e-26unnamed protein product [Coffea canephora]
JMFS160E06Sequence545000055 (14)ref|XP_009610912.1|8e-29PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana tomentosifor
JMFS168B02Sequence619000055 (14)ref|XP_009610912.1|6e-34PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana tomentosifor
JMSF039O04Sequence690000055 (14)emb|CDP02093.1|2e-42unnamed protein product [Coffea canephora]864011077 (2)ref|XP_009610912.1|1e-04PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana tomentosifor

Alignment

This contig is upended


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JMFS168B02+                                                         TTTCATGCGCCCGG
JMFS020D08+                                                         TTTCATGCGCCCGG
JMFS013D01+                                                         TTTCATGCCGCCGG
JMSF039O04+               ATGAGGTGAGAGGTGGAGGCACATTATCACCGGTTACAGATATTTCATGCCGCCGG
                      ____________________________________________________________
consensus                 ATGAGGTGAGAGGTGGAGGCACATTATCACCGGTTACAGATATTTCATGCGGCCGG
 
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JMFS168B02+           CGATAAGAATCAGGAGATAAGTCACTTCCTACAGTGGATGAACTATCTTTATAAGCAGAT
JMFS020D08+           CGATAAGAATCAGGAGATAAGTCACTTCCTACAGTGGATGAACTATCTTTATAAGCAGAT
JMFS151B03+             ATAAGAATCAGGAGATAAGTCACTTCCTACAGTGGATGAACTATCTTTATAAGCAGAT
JMFS013D01+           CGATAAGAATCAGGAGATAAGTCACTTCCTACAGTGGATGAACTATCTTTATAAGCAGAT
JMSF039O04+           CGATAAGAATCAGGAGATAAGTCACTTCCTACAGTGGATGAACTATCTTTATAAGCAGAT
JMFF042P08+               AAGAATCAGGAGATAAGTCACTTCCTACAGTGGATGAACTATCTTTATAAGCAGAT
                      ____________________________________________________________
consensus             CGATAAGAATCAGGAGATAAGTCACTTCCTACAGTGGATGAACTATCTTTATAAGCAGAT
 
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JMFS168B02+           GCACCATTTCCTACTAATGGCATGTTTGAAACACCACGAGAGTGGTCGAAGTTGTTTCTT
JMFS160E06+                ATTTCCTACTAATGGCATGTTTGAAACACCACGAGAGTGGTCGAAGTTGTTTCTT
JMFS020D08+           GCACCATTTCCTACTAATGGCATGTTTGAAACACCACGAGAGTGGTCGAAGTTGTTTCTT
JMFS151B03+           GCACCATTTCCTACTAATGGCATGTTTGAAACACCACGAGAGTGGTCGAAGTTGTTTCTT
JMFS103B06+                    CCTACTAATGGCATGTTTGAAACACCACGAGAGTGGTCGAAGTTGTTTCTT
JMFS013D01+           GCACCATTTCCTACTAATGGCATGTTTGAAACACCACGAGAGTGGTCGAAGTTGTTTCTT
JMSF039O04+           GCACCATTTCCTACTAATGGCATGTTTGAAACACCACGAGAGTGGTCGAAGTTGTTTCTT
JMFF042P08+           GCACCATTTCCTACTAATGGCATGTTTGAAACACCACGAGAGTGGTCGAAGTTGTTTCTT
JMFF026G09+                            TGGCATGTTTGAAACACCACGAGAGTGGTCGAAGTTGTTTCTT
                      ____________________________________________________________
consensus             GCACCATTTCCTACTAATGGCATGTTTGAAACACCACGAGAGTGGTCGAAGTTGTTTCTT
 
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JMFS168B02+           TCACTCTGATAGTCCTCCCCACCAGAAGGCTTACTAGAGCCACGGTGACCTCTACCGTAT
JMFS160E06+           TCACTCTGATAGTCCTCCCCACCAGAAGGCTTACTAGAGCCACGGTGACCTCTACCGTAT
JMFS020D08+           TCACTCTGATAGTCCTCCCCACCAGAAGGCTTACTAGAGCCACGGTGACCTCTACCGTAT
JMFS151B03+           TCACTCTGATAGTCCTCCCCACCAGAAGGCTTACTAGAGCCACGGTGACCTCTACCGTAT
JMFS103B06+           TCACTCTGATAGTCCTCCCCACCAGAAGGCTTACTAGAGCCACGGTGACCTCTACCGTAT
JMFS013D01+           TCACTCTGATAGTCCTCCCCACCAGAAGGCTTACTAGAGCCACGGTGACCTCTACCGTAT
JMSF039O04+           TCACTCTGATAGTCCTCCCCACCAGAAGGCTTACTAGAGCCACGGTGACCTCTACCGTAT
JMFF042P08+           TCACTCTGATAGTCCTCCCCACCAGAAGGCTTACTAGAGCCACGGTGACCTCTACCGTAT
JMFS158E01+                                                      GGTGACCTCTACCGTAT
JMFF026G09+           TCACTCTGATAGTCCTCCCCACCAGAAGGCTTACTAGAGCCACGGTGACCTCTACCGTAT
JMFF020N20+                                                                     AT
JMFF012E23+                                                               TACCGTAT
                      ____________________________________________________________
consensus             TCACTCTGATAGTCCTCCCCACCAGAAGGCTTACTAGAGCCACGGTGACCTCTACCGTAT
 
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JMFS168B02+           CTATCAACATCATCATTGTCTCTGTGTTGCCCATGAGAAGACTTTTGAACAGAAGAACTC
JMFS160E06+           CTATCAACATCATCATTGTCTCTGTGTTGCCCATGAGAAGACTTTTGAACAGAAGAACTC
JMFS020D08+           CTATCAACATCATCATTGTCTCTGTGTTGCCCATGAGAAGACTTTTGAACAGAAGAACTC
JMFS151B03+           CTATCAACATCATCATTGTCTCTGTGTTGCCCATGAGAAGACTTTTGAACAGAAGAACTC
JMFS103B06+           CTATCAACATCATCATTGTCTCTGTGTTGCCCATGAGAAGACTTTTGAACAGAAGAACTC
JMFS013D01+           CTATCAACATCATCATTGTCTCTGTGTTGCCCATGAGAAGACTTTTGAACAGAAGAACTC
JMSF039O04+           CTATCAACATCATCATTGTCTCTGTGTTGCCCATGAGAAGACTTTTGAACAGAAGAACTC
JMFF042P08+           CTATCAACATCATCATTGTCTCTGTGTTGCCCATGAGAAGACTTTTGAACAGAAGAACTC
JMFS158E01+           CTATCAACATCATCATTGTCTCTGTGTTGCCCATGAGAAGACTTTTGAACAGAAGAACTC
JMFF026G09+           CTATCAACATCATCATTGTCTCTGTGTTGCCCATGAGAAGACTTTTGAACAGAAGAACTC
JMFF020N20+           CTATCAACATCATCATTGTCTCTGTGTTGCCCATGAGAAGACTTTTGAACAGAAGAACTC
JMFF012E23+           CTATCAACATCATCATTGTCTCTGTGTTGCCCATGAGAAGACTTTTGAACAGAAGAACTC
                      ____________________________________________________________
consensus             CTATCAACATCATCATTGTCTCTGTGTTGCCCATGAGAAGACTTTTGAACAGAAGAACTC
 
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JMFS168B02+           ACAAAACCAGCAGATGATTTATGTATTGGAGCAGAGCCACCAGGCCTCTCATACTGAGTA
JMFS160E06+           ACAAAACCAGCAGATGATTTATGTATTGGAGCAGAGCCACCAGGCCTCTCATACTGAGTA
JMFS020D08+           ACAAAACCAGCAGATGATTTATGTATTGGAGCAGAGCCACCAGGCCTCTCATACTGAGTA
JMFS151B03+           ACAAAACCAGCAGATGATTTATGTATTGGAGCAGAGCCACCAGGCCTCTCATACTGAGTA
JMFS103B06+           ACAAAACCAGCAGATGATTTATGTATTGGAGCAGAGCCACCAGGCCTCTCATACTGAGTA
JMFS013D01+           ACAAAACCAGCAGATGATTTATGTATTGGAGCAGAGCCACCAGGCCTCTCATACTGAGTA
JMSF039O04+           ACAAAACCAGCAGATGATTTATGTATTGGAGCAGAGCCACCAGGCCTCTCATACTGAGTA
JMFF042P08+           ACAAAACCAGCAGATGATTTATGTATTGGAGCAGAGCCACCAGGCCTCTCATACTGAGTA
JMFS158E01+           ACAAAACCAGCAGATGATTTATGTATTGGAGCAGAGCCACCAGGCCTCTCATACTGAGTA
JMFF026G09+           ACAAAACCAGCAGATGATTTATGTATTGGAGCAGAGCCACCAGGCCTCTCATACTGAGTA
JMFF020N20+           ACAAAACCAGCAGATGATTTATGTATTGGAGCAGAGCCACCAGGCCTCTCATACTGAGTA
JMFS045G03+                                           AGAGCCACCAGTCTTCTCATATTGAGTA
JMFS035G02+                           ATTTATGTATTGGAGCAGAGCCTCCAGGCCTGTCATAGTGAGTA
JMFF012E23+           ACAAAACCAGCAGATGATTTATGTATTGGAGCAGAGCCACCAGGCCTCTCATACTGAGTA
                      ____________________________________________________________
consensus             ACAAAACCAGCAGATGATTTATGTATTGGAGCAGAGCCACCAGGCCTCTCATACTGAGTA
 
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JMFS168B02+           ATATTAGTCTCTGGATTCCAGTAGTAAAGATACCCAGTCTTACCATCAAC---AAGGCCT
JMFS160E06+           ATATTAGTCTCTGGATTCCAGTAGTAAAGATACCCAGTCTTACCATCAAC---AAGGCCT
JMFS020D08+           ATATTAGTCTCTGGATTCCAGTAGTAAAGATACCCAGTCTTACCATCAAC---AAGGCCT
JMFS151B03+           ATATTAGTCTCTGGATTCCAGTAGTAAAGATACCCAGTCTTACCATCAAC---AAGGCCT
JMFS103B06+           ATATTAGTCTCTGGATTCCAGTAGTAAAGATACCCAGTCTTACCATCAAC---AAGGCCT
JMFS013D01+           ATATTAGTCTCTGGATTCCAGTAGTAAAGATACCCAGTCTTACCATCAAC---AAGGCCT
JMSF039O04+           ATATTAGTCTCTGGATTCCAGTAGTAAAGATACCCAGTCTTACCATCAAC---AAGGCCT
JMFF042P08+           ATATTAGTCTCTGGATTCCAGTAGTAAAGATACCCAGTCTTACCATCAAC---AAGGCCT
JMFS158E01+           ATATTAGTCTCTGGATTCCAGTAGTAAAGATACCCAGTCTTACCATCAAC---AAGGCCT
JMFF026G09+           ATATTAGTCTCTGGATTCCAGTAGTAAAGATACCCAGTCTTACCATCAAC---AAGGCCT
JMFF020N20+           ATATTAGTCTCTGGATTCCAGTAGTAAAGATACCCAGTCTTACCATCAAC---AAGGCCT
JMFS045G03+           ATATTAGNCTTTGTATTCCATTAGTAATGATACCCAGTTTTACCATCATC---TATGCCT
JMFS035G02+           ATATTAGTCTCTGGACTCCAGTAGTAAAAATACCCAGTCTTACCTGCTAACTAAGGCCGT
JMFF012E23+           ATATTAGTCTCTGGATTCCAGTAGTAAAGATACCCAGTCTTACCATCAAC---AAGGCCT
                      ____________________________________________________________
consensus             ATATTAGTCTCTGGATTCCAGTAGTAAAGATACCCAGTCTTACCATCAAC---AAGGCCT
 
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JMFS168B02+           TTCCAAGGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGGATCAGCAGATGCAATT
JMFS160E06+           TTCCAAGGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGGATCAGCAGATGCAATT
JMFS020D08+           TTCCAAGGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGGATCAGCAGATGCAATT
JMFS151B03+           TTCCAAGGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGGATCAGCAGATGCAATT
JMFS103B06+           TTCCAAGGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGGATCAGCAGATGCAATT
JMFS013D01+           TTCCAAGGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGGATCAGCAGATGCAATT
JMSF039O04+           TTCCAAGGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGGATCAGCAGATGCAATT
JMFF042P08+           TTCCAAGGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGGATCAGCAGATGCAATT
JMFS158E01+           TTCCAAGGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGGATCAGCAGATGCAATT
JMFF026G09+           TTCCAAGGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGGATCAGCAGATGCAATT
JMFF020N20+           TTCCAAGGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGGATCAGCAGATGCAATT
JMFS045G03+           TTCCATTGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGTATCAGCAGATGCTATT
JMFS035G02+           TTCCAAGGTTTAGGAAGAGAGGGTTCCTCCGGTGCATATCGTGGATCAGCAGATGCAACT
JMFF012E23+           TTCCAAGGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGGATCAGCAGATGCAATT
                      ____________________________________________________________
consensus             TTCCAAGGTTTAGGGAGAGAGGGATCCTCCGGTGCATATCGTGGATCAGCAGATGCAATT
 
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JMFS168B02+           GCTGCCATCTCAAAGCTCACTTTGAACAATCGGGGAAGCTGGCGAGGTCGCTGCGATCTC
JMFS160E06+           GCTGCCATCTCAAAGCTCACTTTGAACAATCGGGGAAGCTGGCGAGGTCGCTGCGATCTC
JMFS020D08+           GCTGCCATCTCAAAGCTCACTTTGAACAATCGGGGAAGCTGGCGAGGTCGCTGCGATCTC
JMFS151B03+           GCTGCCATCTCAAAGCTCACTTTGAACAATCGGGGAAGCTGGCGAGGTCGCTGCGATCTC
JMFS103B06+           GCTGCCATCTCAAAGCTCACTTTGAACAATCGGGGAAGCTGGCGAGGTCGCTGCGATCTC
JMFS013D01+           GCTGCCATCTCAAAGCTCACTTTGAACAATCGGGGAAGCTGGCGAGGTCGCTGCGATCTC
JMSF039O04+           GCTGCCATCTCAAAGCTCACTTTGAACAATCGGGGAAGCTGGCGAGGTCGCTGCGATCTC
JMFF042P08+           GCTGCCATCTCAAAGCTCACTTTGAACAATCGGGGAAGCTGGCGAGGTCGCTGCGATCTC
JMFS158E01+           GCTGCCATCTCAAAGCTCACTTTGAACAATCGGGGAAGCTGGCGAGGTCGCTGCGATCTC
JMFF026G09+           GCTGCCATCTCAAAGCTCACTTTGAACAATCGGGGAAGCTGGCGAGGTCGCTGCGATCTC
JMFF020N20+           GCTGCCATCTCAAAGCTCACTTTGAACAATCGGGGAAGCTGGCGAGGTCGCTGCGATCTC
JMFS045G03+           GCTGCCATTTCATAGTTCTCTTTGTACAATCGGGGAAGCTGGTGAGGTCGCTGCGATTTC
JMFS035G02+           GTTGCCATCTCAAAGCTCACTTTGAGCAATCGGGGAAGCTGGCAAGGTCGCTGCGATCTC
JMFF012E23+           GCTGCCATCTCAAAGCTCACTTTGAACAATCGGGGAAGCTGGCGAGGTCGCTGCGATCTC
                      ____________________________________________________________
consensus             GCTGCCATCTCAAAGCTCACTTTGAACAATCGGGGAAGCTGGCGAGGTCGCTGCGATCTC
 
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JMFS168B02+           AAAAATGAG-TGTTGCCTTTTGTCAGGTTGAGATGTGTATAAACGCTACGCGACTCCGAT
JMFS160E06+           AAAAATGAG-TGTTGCCTTTTGTCAGGTTGAGATGTGTATAAACGCTACGCGACTCCGAT
JMFS020D08+           AAAAATGAG-TGTTGCCTTTTGTCAGGTTGAGATGTGTATAAACGCTACGCGACTCCGAT
JMFS151B03+           AAAAATGAG-TGTTGCCTTTTGTCAGGTTGAGATGTGTATAAACGCTACGCGACTCCGAT
JMFS103B06+           AAAAATGAG-TGTTGCCTTTTGTCAGGTTGAGATGTGTATAAACGCTACGCGACTCCGAT
JMFS013D01+           AAAAATGAG-TGTTGCCTTTTGTCAGGTTGAGATGTG-ATAAACGCTACGCGACTCCGAT
JMSF039O04+           AAAAATGAG-TGTTGCCTTTTGTCAGGTTGAGATGTGTATAAACGCTACGCGACTCCGAT
JMFF042P08+           AAAAATGAG-TGTTGCCTTTTGTCAGGTTGAGATGTGTATAAACGCTACGCGACTCCGAT
JMFS158E01+           AAAAATGAG-TGTTGCCTTTTGTCAGGTTGAGATGTGTATAAACGCTACGCGACTCCGAT
JMFF026G09+           AAAAATGAG-TGTTGCCTTTTGTCAGGTTGAGATGTGTATAAACGCTACGCGACTCCGAT
JMFF020N20+           AAAAATGAG-TGTTGCCTTTTGTCAGGTTGAGATGTGTATAAACGCTACGCGACTCCGAT
JMFS045G03+           AAAAATGAGTTGGTGCCTTTTGTCAGGNTGAGATGTGTATAAACGCTACGCGACTCCGAT
JMFS035G02+           AAAAATGAG-TGTTGC                                            
JMFF012E23+           AAAAATGAG-TGTTGCCTTTTGTCAGGTTGAGATGTGTATAAACGCTACGCGACTCCGAT
                      ____________________________________________________________
consensus             AAAAATGAG-TGTTGCCTTTTGTCAGGTTGAGATGTGTATAAACGCTACGCGACTCCGAT
 
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JMFS168B02+           TGTTTCGCTCTTCCTCTCTCTTTCCCAATCTCTCTATTATATGTGTGCTGAAGGGAATGA
JMFS160E06+           TGTTTCGCTCTTCCTCTCTCTTTCCCAATCTCTCTATTATATGTGTGCTGAAGGGAATGA
JMFS020D08+           TGTTTCGCTCTTCCTCTCTCTTTCCCAATCTCTCTATTATATGTGTGCTGAAGGGAATGA
JMFS151B03+           TGTTTCGCTCTTCCTCTCTCTTTCCCAATCTCTCTATTATATGTGTGCTGAAGGGAATGA
JMFS103B06+           TGTTTCGCTCTTCCTCTCTCTTTCCCAATCTCTCTATTATATGTGTGCTGAAGGGAATGA
JMFS013D01+           TGTTTCGCTCTTCCTCTCTCTTTCCCA                                 
JMSF039O04+           TGTTTCGCTCTTCCTCTCTCTTTCCCAATCTCTCTATTATATGTGTGCTGAAGGGAATGA
JMFF042P08+           TGTTTCGCTCTTCCTCTCTCTTTCCCAACCTCTCTATTATATGTGTGCTGAAGGGAATGA
JMFS158E01+           TGTTTCGCTCTTCCTCTCTCTTTCCCAATCTCTCTATTATATGTGTGCTGAAGGGAATGA
JMFF026G09+           TGTTTCGCTCTTCCTCTCTCTTTCCCAATCTCTCTATTATATGTGTGCTGAAGGGAATGA
JMFF020N20+           TGTTTCGCTCTTCCTCTCTCTTTCCCAATCTCTCTATTATATGTGTGCTGAAGGGAATGA
JMFS045G03+           TGTATCGCAGATCCTCTCTCTTT                                     
JMFF012E23+           TGTTTCGCTCTTCCTCTCTCTTTCCCAATCTCTCTATTATATGTGTGCTGAAGGGAATGA
                      ____________________________________________________________
consensus             TGTTTCGCTCTTCCTCTCTCTTTCCCAATCTCTCTATTATATGTGTGCTGAAGGGAATGA
 
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JMFS168B02+           GAAAGA                                                      
JMFS160E06+           GAAAGAGAGAGCCA                                              
JMFS020D08+           GAAAGAGAGAGCCACGCTTCCTGAA                                   
JMFS151B03+           GAAAGAGAGAGCCACGCTTCCTGAAGCTAA                              
JMFS103B06+           GAAAGAGAGAGCCACGCTTCCTGAAGCTAAGAA                           
JMSF039O04+           GAAAGAGAGAGCCACGCTTCCTGAAGCTAAGAAGC                         
JMFF042P08+           GAAAGAGAGAGCCACGCTTCCTGAAGCTAAGAAGCGTAGGGTAATGAA            
JMFS158E01+           GAAA                                                        
JMFF026G09+           GAAAGAGAGAGCCACGCTTCCTGAAGCTAAGAAGCGTAGGGTAATGAA            
JMFF020N20+           GAAAGAGAGAGCCACGCTTCCTGAAGCTAAGAAGCGTAGGGTAATGAAAGAGGCGTAAGT
JMFF012E23+           GAAAGAGAGAGCCACGCTTCCTGAAGCTAAGAAGCGTAGGGTAATGAAAGAGGCGTAAGT
                      ____________________________________________________________
consensus             GAAAGAGAGAGCCACGCTTCCTGAAGCTAAGAAGCGTAGGGTAATGAAAGAGGCGTAAGT
 
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JMFF020N20+           ATAGCTAGACGGGAATATTTAAAGCAGCAACTGCAAGAGAAAATCCAAATGAGGGAAGAC
JMFF012E23+           ATAGCTAGACGGGAATATTTAAAGCAGCAACTGCAAGAGAAAATCCAAATGAGGGAAGAC
                      ____________________________________________________________
consensus             ATAGCTAGACGGGAATATTTAAAGCAGCAACTGCAAGAGAAAATCCAAATGAGGGAAGAC