Contig 000049:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF013K09-                                                   TTTTAGGAGAAATACAGAT
                      ____________________________________________________________
consensus                                                      TTTTAGGAGAAATACAGAT
 
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rJMFF013K09-          TTCATAAACTTGAAACAAAACTAGGTTACAAAATCCTCATAGAAACATACATAAAATCTG
                      ____________________________________________________________
consensus             TTCATAAACTTGAAACAAAACTAGGTTACAAAATCCTCATAGAAACATACATAAAATCTG
 
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rJMFF013K09-          AAACCTGAGAAGGAACATTGAAAAACAAGATTTGGTTACATGCATAATCCAACTCAATTA
                      ____________________________________________________________
consensus             AAACCTGAGAAGGAACATTGAAAAACAAGATTTGGTTACATGCATAATCCAACTCAATTA
 
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rJMFF013K09-          CTCCTTGAATGAACTACTTGTACAGGTTCAAGCAGAAAACACAGCCTCAACCAGCACATG
                      ____________________________________________________________
consensus             CTCCTTGAATGAACTACTTGTACAGGTTCAAGCAGAAAACACAGCCTCAACCAGCACATG
 
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rJMFF013K09-          CTTTCTCCTGGGATACCCCATGCCCACCAAATGGCTAACATACACTCTCCCATCCTTCAC
                      ____________________________________________________________
consensus             CTTTCTCCTGGGATACCCCATGCCCACCAAATGGCTAACATACACTCTCCCATCCTTCAC
 
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rJMFF013K09-          CGTGGCTGCAGTTGACACACGATGAATGGCGCCGTTGGTTTTGCCCACAATCCTAGCGCT
                      ____________________________________________________________
consensus             CGTGGCTGCAGTTGACACACGATGAATGGCGCCGTTGGTTTTGCCCACAATCCTAGCGCT
 
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rJMFF013K09-          TACCCAATCGTCAGAACTCTCGACCAGCCTTGTTGGGTTCCCAGCAACGACCAGCTTGTT
JMFN028L24+                             CTCGACCAGCCTTGTTGGGTTCCCAGCAACGACCAGCTTGTT
                      ____________________________________________________________
consensus             TACCCAATCGTCAGAACTCTCGACCAGCCTTGTTGGGTTCCCAGCAACGACCAGCTTGTT
 
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rJMFF013K09-          GGGCGACAGAAGCTCCATGCCGTCTCCAAACCTCAGTGACCCTCCAACCACGTTAACAAT
JMFN028L24+           GGGCGACAGAAGCTCCATGCCGTCTCCAAACCTCAGTGACCCTCCAACCACGTTAACAAT
                      ____________________________________________________________
consensus             GGGCGACAGAAGCTCCATGCCGTCTCCAAACCTCAGTGACCCTCCAACCACGTTAACAAT
 
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rJMFF013K09-          CTCGACTTTGTTTCCCTTTGCTGTTTGGACCTTGTACAAATTGCCCGAGAAAGTGTGGAC
JMFN028L24+           CTCGACTTTGTTTCCCTTTGCTGTTTGGACCTTGTACAAATTGCCCGAGAAAGTGTGGAC
                      ____________________________________________________________
consensus             CTCGACTTTGTTTCCCTTTGCTGTTTGGACCTTGTACAAATTGCCCGAGAAAGTGTGGAC
 
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rJMFF013K09-          AACTAGCAGGTATCCGTTTGGATGATACACAATTCCATTGAGAGCAACCAAGTTCTTGTA
JMFN028L24+           AACTAGCAGGTATCCGTTTGGATGATACACAATTCCATTGAGAGCAACCAAGTTCTTGTA
                      ____________________________________________________________
consensus             AACTAGCAGGTATCCGTTTGGATGATACACAATTCCATTGAGAGCAACCAAGTTCTTGTA
 
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rJMFF013K09-          CCACTCTTTGGGGGTAAAAAGGGGACTCCTTATTGTATGCTGGAGCTCTCCCTCGGGCCC
JMFN028L24+           CCACTCTTTGGGGGTAAAAAGGGGACTCCTTATTGTATGCTGGAGCTCTCCCTCGGGCCC
                      ____________________________________________________________
consensus             CCACTCTTTGGGGGTAAAAAGGGGACTCCTTATTGTATGCTGGAGCTCTCCCTCGGGCCC
 
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rJMFF013K09-          GACCTTCCATATCTTACTCGCTTTAGCGTCTGTTATGTATGCATTCCCCTCCTCATCAAC
JMFN028L24+           GACCTTCCATATCTTACTCGCTTTAGCGTCTGTTATGTATGCATTCCCCTCCTCATCAAC
JMFF013K09+                                                                  TCAAC
JMFF010L07+                           CTCGCTTTAGCGTCTGTTATGTATGCATTCCCCTCCTCATCAAC
                      ____________________________________________________________
consensus             GACCTTCCATATCTTACTCGCTTTAGCGTCTGTTATGTATGCATTCCCCTCCTCATCAAC
 
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rJMFF013K09-          CGCAACGTCATCTGCAAATGATTTCTCGTCCTCTGGGCCGC                   
JMFN028L24+           CGCAACGTCATCTGCAAATGATTTCTCGTCCTCTGGGCCGCCGAGTTTCGTAAGGAATAT
JMFF013K09+           CGCAACGTCATCTGCAAATGATTTCTCGTCCTNTGGGCCGCCGAGTTTCGTAAGGAATAT
JMFF010L07+           CGCAACGTCATCTGCAAATGATTTCTCGTCCTCTGGGCCGCCGAGTTTCGTAAGGAATAT
                      ____________________________________________________________
consensus             CGCAACGTCATCTGCAAATGATTTCTCGTCCTCTGGGCCGCCGAGTTTCGTAAGGAATAT
 
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JMFN028L24+           TCTCTTCCACGTGGACAAATCATACGCGGCCAGAGCGCTATACCGGTTCCCGAAAACATC
JMFF013K09+           TCTCTTCCACGTGGACAAATCATACGCGGCCAGAGCGCTATACCGGTTCCCGAAAACATC
JMFF010L07+           TCTCTTCCACGTGGACAAATCATACGCGGCCAGAGCGCTATACCGGTTCCCGAAAACATC
                      ____________________________________________________________
consensus             TCTCTTCCACGTGGACAAATCATACGCGGCCAGAGCGCTATACCGGTTCCCGAAAACATC
 
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JMFN028L24+           GGCGACGGCCACGAGAAGACGGTTACGGCGACGGTCAATAGCGAGGCCAAGCGAGGCGTT
JMFF013K09+           GGCGACGGCCACGAGAAGACGGTTACGGCGACGGTCAATAGCGAGGCCAAGCGAGGCGTT
JMFF010L07+           GGCGACGGCCACGAGAAGACGGTTACGGCGACGGTCAATAGCGAGGCCAAGCGAGGCGTT
                      ____________________________________________________________
consensus             GGCGACGGCCACGAGAAGACGGTTACGGCGACGGTCAATAGCGAGGCCAAGCGAGGCGTT
 
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JMFN028L24+           CCCGGACAAGTCAACCTCCTTGACGAGCGGCGTTTCCTGGAGGACAGATCCGGCGGAGCC
JMFF013K09+           CCCGGACAAGTCAACCTCCTTGACGAGCGGCGTTTCCTGGAGGACAGATCCGGCGGAGCC
JMFF010L07+           CCCGGACAAGTCAACCTCCTTGACGAGCGGCGTTTCCTGGAGGACAGATCCGGCGGAGCC
                      ____________________________________________________________
consensus             CCCGGACAAGTCAACCTCCTTGACGAGCGGCGTTTCCTGGAGGACAGATCCGGCGGAGCC
 
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JMFN028L24+           GTCGTGGTCGAGGGGGACGGGAATCTG                                 
JMFF013K09+           GTCGTGGTCGAGGGGGACGGGAATCTGGCCGACGCCGCCGTCGAAAAAGGTGACGAGGAA
JMFF010L07+           GTCGTGGTCGAGGGGGACGGGAATCTGGCCGACGCCGCCGTCGAAAAAGGTGACGAGGAA
                      ____________________________________________________________
consensus             GTCGTGGTCGAGGGGGACGGGAATCTGGCCGACGCCGCCGTCGAAAAAGGTGACGAGGAA
 
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JMFF013K09+           TCGACGGCCCTGATCGTCCCACTTGGCGCGCTCGCGGAACCACCCGGTGCTGTGGTACTG
JMFF010L07+           TCGACGGCCCTGATCGTCCCACTTGGCGCACTCGCGGAACCACCCGGTGCTGTGGTACTG
                      ____________________________________________________________
consensus             TCGACGGCCCTGATCGTCCCACTTGGCGCGCTCGCGGAACCACCCGGTGCTGTGGTACTG
 
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JMFF013K09+           GATAACATCGGTGGACGGCCGGCCGGCGGTCTCAAGGTGGACGATAACGGCGAGGGGAAT
JMFF010L07+           GATAACATCGGTGGACGGCCGGCCGGCGGTCTCAAGGTGGACGATAACGGCGAGGGGAAT
                      ____________________________________________________________
consensus             GATAACATCGGTGGACGGCCGGCCGGCGGTCTCAAGGTGGACGATAACGGCGAGGGGAAT
 
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JMFF013K09+           GGCGGAGACGATGAAGAAGAGTAACAGGAATTTTGCCGAGCAAGGGAAGACACTCGCCAT
JMFF010L07+           GGCGGAGACGATGAAGAAGAGTAACAGGAATTTTGCCGAGCAAGGGAAGACACTCGCCAT
                      ____________________________________________________________
consensus             GGCGGAGACGATGAAGAAGAGTAACAGGAATTTTGCCGAGCAAGGGAAGACACTCGCCAT
 
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JMFF013K09+           GACTCACACCCTCCACGCTTCGCAGGCTGGCGAGAAGGATGAAGGGAGAAGGGAAAAGGC
JMFF010L07+           GACTCACACCCTCCACGCTTCGCAGGCTGGCGAGAAGGATGAAGGGAGAAGGGAAAAGGC
                      ____________________________________________________________
consensus             GACTCACACCCTCCACGCTTCGCAGGCTGGCGAGAAGGATGAAGGGAGAAGGGAAAAGGC