Contig 000048:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008C01Sequence268000048 (5)ref|XP_010318068.1|3e-05PREDICTED: uncharacterized protein LOC101255670 isoform X2 [Solanum lycopersicu679006804 (3)ref|XP_006347538.1|146PREDICTED: uncharacterized protein LOC102596319 [Solanum tuberosum]
JMFF010I14Sequence617000048 (5)ref|XP_009629933.1|228PREDICTED: uncharacterized protein LOC104119994 [Nicotiana tomentosiformis]742006804 (3)ref|XP_006347538.1|179PREDICTED: uncharacterized protein LOC102596319 [Solanum tuberosum]
JMFS013D12Sequence637000048 (5)ref|XP_009799633.1|305PREDICTED: uncharacterized protein LOC104245681 [Nicotiana sylvestris]
JMFS112H05Sequence567000048 (5)ref|XP_009629933.1|222PREDICTED: uncharacterized protein LOC104119994 [Nicotiana tomentosiformis]
JMSF018E11Sequence505000048 (5)ref|XP_009629933.1|195PREDICTED: uncharacterized protein LOC104119994 [Nicotiana tomentosiformis]765006804 (3)ref|XP_006347538.1|215PREDICTED: uncharacterized protein LOC102596319 [Solanum tuberosum]

Alignment

This contig is upended


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JMFS013D12+                                                            TGCCCTTGCTT
                      ____________________________________________________________
consensus                                                              TGCCCTTGCTT
 
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JMFS013D12+           GTTGCAACTCATCATTTAATGCAACAGCTGGGAGAGGTTCGATAATACTTCCCATACCTG
                      ____________________________________________________________
consensus             GTTGCAACTCATCATTTAATGCAACAGCTGGGAGAGGTTCGATAATACTTCCCATACCTG
 
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JMFS013D12+           AACCGCTTGACAACAGAAGCCCCTCAAAGCCCATTCGCTGAGCAGATCCTGATCTTATGC
                      ____________________________________________________________
consensus             AACCGCTTGACAACAGAAGCCCCTCAAAGCCCATTCGCTGAGCAGATCCTGATCTTATGC
 
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JMFS013D12+           ACCATCTGCCATCAACTGTGCTCACTTCCAAAGAGGATGTTTCCCTTGTTTCATTCCTAA
                      ____________________________________________________________
consensus             ACCATCTGCCATCAACTGTGCTCACTTCCAAAGAGGATGTTTCCCTTGTTTCATTCCTAA
 
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JMFS013D12+           TCAAGGCCTCCATCAACTGGTACAACTTTCTTTCAAGAAAACGAACTTGATCACGGGATT
                      ____________________________________________________________
consensus             TCAAGGCCTCCATCAACTGGTACAACTTTCTTTCAAGAAAACGAACTTGATCACGGGATT
 
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JMFS013D12+           GTCTCAAAGTAGAGCTCGCAGAATCCTTAACAGAGCCATCTTCATCAACCAATTGTTGTA
                      ____________________________________________________________
consensus             GTCTCAAAGTAGAGCTCGCAGAATCCTTAACAGAGCCATCTTCATCAACCAATTGTTGTA
 
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JMFS013D12+           TGAAGCTCACTAATGATCGGCTTATCTCAAGTTCTACAATCACTTCAGTAAGAGGCATGA
JMFS112H05+                                                              GAGGCATGA
JMFF010I14+                                                      TTCAGTAAGAGGCATGA
                      ____________________________________________________________
consensus             TGAAGCTCACTAATGATCGGCTTATCTCAAGTTCTACAATCACTTCAGTAAGAGGCATGA
 
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JMFS013D12+           AGCGCTGATACCAATCTGCATCTTGTTTAATTGCAGATTTAACATTTGACTGTAAATCTT
JMFS112H05+           AGCGCTGATACCAATCTGCATCTTGTTTAATTGCAGATTTAACATTTGACTGTAAATCTT
JMSF018E11+                                    TTTAATTGCAGATTTAACATTTGACTGTAAATCTT
JMFF010I14+           AGCGCTGATACCAATCTGCATCTTGTTTAATTGCAGATTTAACATTTGACTGTAAATCTT
                      ____________________________________________________________
consensus             AGCGCTGATACCAATCTGCATCTTGTTTAATTGCAGATTTAACATTTGACTGTAAATCTT
 
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JMFS013D12+           CAGCAAACTGTAACAGAGCTGCAAGAGCAATGGCCTCACTCCCACTGACAGGAGAATCCC
JMFS112H05+           CAGCAAACTGTAACAGAGCTGCAAGAGCAATGGCCTCACTCCCACTGACAGGAGAATCCC
JMSF018E11+           CAGCAAACTGTAACAGAGCTGCAAGAGCAATGGCCTCACTCCCACTGACAGGAGAATCCC
JMFF010I14+           CAGCAAACTGTAACAGAGCTGCAAGAGCAATGGCCTCACTCCCACTGACAGGAGAATCCC
                      ____________________________________________________________
consensus             CAGCAAACTGTAACAGAGCTGCAAGAGCAATGGCCTCACTCCCACTGACAGGAGAATCCC
 
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JMFS013D12+           TACGTGCACATTGTATAGCAAGTTTCACCAGCTCGATATCAAGTCCAGTAAACTCCATCA
JMFS112H05+           TACGTGCACATTGTATAGCAAGTTTCACCAGCTCGATATCAAGTCCAGTAAACTCCATCA
JMSF018E11+           TACGTGCACATTGTATAGCAAGTTTCACCAGCTCGATATCAAGTCCAGTAAACTCCATCA
JMFF010I14+           TACGTGCACATTGTATAGCAAGTTTCACCAGCTCGATATCAAGTCCAGTAAACTCCATCA
                      ____________________________________________________________
consensus             TACGTGCACATTGTATAGCAAGTTTCACCAGCTCGATATCAAGTCCAGTAAACTCCATCA
 
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JMFS013D12+           TTGCACCGTATTTATGCATTTCCAAAGCAGCACTGGTTTCCTGTAACAGTGTAAGACTGT
JMFS112H05+           TTGCACCGTATTTATGCATTTCCAAAGCAGCACTGGTTTCCTGTAACAGTGTAAGACTGT
JMSF018E11+           TTGCACCGTATTTATGCATTTCCAAAGCAGCACTGGTTTCCTGTAACAGTGTAAGACTGT
JMFF010I14+           TTGCACCGTATTTATGCATTTCCAAAGCAGCACTGGTTTCCTGTAACAGTGTAAGACTGT
                      ____________________________________________________________
consensus             TTGCACCGTATTTATGCATTTCCAAAGCAGCACTGGTTTCCTGTAACAGTGTAAGACTGT
 
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JMFS013D12+           CTTCGTATGTTCGACTCAAATTCCAC                                  
JMFS112H05+           CTTCGTATGTTCGACTCAAATTCCACAATTGTTCCTTGGTGGCTTCCTTGCCAAGTGAAG
JMSF018E11+           CTTCGTATGTTCGACTCAAATTCCACAATTGTTCCTTGGTGGCTTCCTTGCCAAGTGAAG
JMFF010I14+           CTTCGTATGTTCGACTCAAATTCCACAATTGTTCCTTGGTGGCTTCCTTGCCAAGTGAAG
                      ____________________________________________________________
consensus             CTTCGTATGTTCGACTCAAATTCCACAATTGTTCCTTGGTGGCTTCCTTGCCAAGTGAAG
 
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JMFS112H05+           TGCCGGCGAAGGAGGCGACGGCATCGCAGACCTTGTCCCACTCGAGGATTCGGAGACTGT
JMSF018E11+           TGCCGGCGAAGGAGGCGACGGCATCGCAGACCTTGTCCCACTCGAGGATTCGGAGACTGT
JMFF008C01+                                           TTGTCCCACTCGAGGATTCGGAGACTGT
JMFF010I14+           TGCCGGCGAAGGAGGCGACGGCATCGCAGACCTTGTCCCACTCGAGGATTCGGAGACTGT
                      ____________________________________________________________
consensus             TGCCGGCGAAGGAGGCGACGGCATCGCAGACCTTGTCCCACTCGAGGATTCGGAGACTGT
 
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JMFS112H05+           CGAGAACCACGGACGGTTGATCGGAGAGTGAAGACGGGGATTTCTGGAGGAAGGCTCGAA
JMSF018E11+           CGAGAACCACGGACGGTTGATCGGAGAGTGAAGACGGGGATTTCTGGAGGAAGGCTCGAA
JMFF008C01+           NGAGAACCACGGACGGTTGATCGGAGAGTGAAGACGGGGATTTNNGGAGGAAGGCTCGAA
JMFF010I14+           CGAGAACCACGGACGGTTGATCGGAGAGTGAAGACGGGGATTTCTGGAGGAAGGCTCGAA
                      ____________________________________________________________
consensus             CGAGAACCACGGACGGTTGATCGGAGAGTGAAGACGGGGATTTCTGGAGGAAGGCTCGAA
 
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JMFS112H05+           CCTCGAACCGGAGCGACTTCCGATGAGTACTCCTGCAGTGAAAAACACCCTTGCTGGATG
JMSF018E11+           CCTCGAACCGGAGCGACTTCCGATGAGTACTCCTGCAGTGAAAAACACCCTTGCTGGCTG
JMFF008C01+           CCTCGAACCGGAGCGACTTCCGATGAGTACTCCTGCAGTGAAAAACACCCTTGCTGGCTG
JMFF010I14+           CCTCGAACCGGAGCGACTTCCGATGAGTACTCCTGCAGTGAAAAACACCCTTGCTGGCTG
                      ____________________________________________________________
consensus             CCTCGAACCGGAGCGACTTCCGATGAGTACTCCTGCAGTGAAAAACACCCTTGCTGGCTG
 
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JMFS112H05+           ATACGGAGAAAGTTGAGGCGGTGACGGCGGCGGAGCAGCTGCCGAGCACAGAGAGTGAGA
JMSF018E11+           ATACGGAGAAAGTTGAGGCGGTGACGGCGGCGGAGCAGCTGCCGAGCAC           
JMFF008C01+           ATACGGAGAAAGTTGAGGCGGTGACGGCGGCGGAGCAGCTGCCGAGCACAGAGAGTGAGA
JMFF010I14+           ATACGGAGAAAGTTGAGGCGGTGACGGCGGCGGAGCAGCTGCCGAGCACAGAGAGTGAGA
                      ____________________________________________________________
consensus             ATACGGAGAAAGTTGAGGCGGTGACGGCGGCGGAGCAGCTGCCGAGCACAGAGAGTGAGA
 
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JMFS112H05+           TTAGCATTCTGCATTTAA                                          
JMFF008C01+           TTAGCATTCTGCATTTAACCGCATCACCAGCGCAGGGAATTGCAGAAACGCGGGAGAAAT
JMFF010I14+           TTAGCATTCTGCATTTAACCGCATCACCAGCGCAGGGAATTGCAGAAACGCGGGAGAAAT
                      ____________________________________________________________
consensus             TTAGCATTCTGCATTTAACCGCATCACCAGCGCAGGGAATTGCAGAAACGCGGGAGAAAT