Contig 000047:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010B08Sequence619000047 (6)ref|XP_009792343.1|9e-41PREDICTED: ankyrin repeat, PH and SEC7 domain containing protein secG-like [Nic700006931 (6)ref|XP_009607989.1|6e-37PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub
JMFF017O21Sequence472000047 (6)ref|XP_009607989.1|3e-33PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub776006931 (6)ref|XP_009607989.1|7e-52PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub
JMFF024M10Sequence461000047 (6)ref|XP_009607989.1|1e-31PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub791006931 (6)ref|XP_009607989.1|5e-55PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub
JMFF035E08Sequence595000047 (6)ref|XP_009792343.1|2e-52PREDICTED: ankyrin repeat, PH and SEC7 domain containing protein secG-like [Nic729006931 (6)ref|XP_009607989.1|1e-49PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub
JMFF039C11Sequence556000047 (6)ref|XP_009792343.1|7e-36PREDICTED: ankyrin repeat, PH and SEC7 domain containing protein secG-like [Nic787006931 (6)ref|XP_009607989.1|2e-53PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub
JMFF042D12Sequence631000047 (6)ref|XP_009792343.1|2e-55PREDICTED: ankyrin repeat, PH and SEC7 domain containing protein secG-like [Nic651006931 (6)ref|XP_004290705.1|3e-26PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub

Alignment

This contig is upended


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JMFF042D12+                                       CAGGAAATCGCCTTAGGGAGTAGAAAATTGGT
JMFF010B08+                                                    TAGGGAGTAGAAAATTGGT
                      ____________________________________________________________
consensus                                         CAGGAAATCGCCTTAGGGAGTAGAAAATTGGT
 
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JMFF042D12+           TTCTAACGAATTAGAAGAGGAAGGGGAAAGAAGGAAGTCCACGACATCAGCTCCAACAAA
JMFF035E08+               AACGAATTAGAAGAGGAAGGGGAAAGAAGGAAGTCCACGACATCAGCTCCAACAAA
JMFF039C11+                                                       CATCAGCTCCAACAAA
JMFF010B08+           TTCTAACGAATTAGAAGAGGAAGGGGAAAGAAGGAAGTCCACGACATCAGCTCCAACAAA
                      ____________________________________________________________
consensus             TTCTAACGAATTAGAAGAGGAAGGGGAAAGAAGGAAGTCCACGACATCAGCTCCAACAAA
 
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JMFF042D12+           ACAGATTGGAATCTTAGCATCCTTGAAAATATTGGGGCCGGGCCGTGAAAATATACGGCG
JMFF035E08+           ACAGATTGGAATCTTAGCATCCTTGAAAATATTGGGGCCGGGCCGTGAAAATATACGGCG
JMFF039C11+           ACAGATTGGAATCTTAGCATCCTTGAAAATATTGGGGCCGGGCCGTGAAAATATACGGCG
JMFF010B08+           ACAGATTGGAATCTTAGCATCCTTGAAAATATTGGGGCCGGGCCGTGAAAATATACGGCG
                      ____________________________________________________________
consensus             ACAGATTGGAATCTTAGCATCCTTGAAAATATTGGGGCCGGGCCGTGAAAATATACGGCG
 
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JMFF042D12+           GAGATCTTCCTGGGTGGCCTTGCCGGTGGGAAGCATGGAGGACCGGACGAGAACAGAGTC
JMFF017O21+                  TCCTGGGTGGCCTTGCCGGTGGGAAGCATGGAGGACCGGACGAGAACAGAGTC
JMFF024M10+                             CTTGCCGGTGGGAAGCATGGAGGACCGGACGAGAACAGAGTC
JMFF035E08+           GAGATCTTCCTGGGTGGCCTTGCCGGTGGGAAGCATGGAGGACCGGACGAGAACAGAGTC
JMFF039C11+           GAGATCTTCCTGGGTGGCCTTGCCGGTGGGAAGCATGGAGGACCGGACGAGAACAGAGTC
JMFF010B08+           GAGATCTTCCTGGGTGGCCTTGCCGGTGGGAAGCATGGAGGACCGGACGAGAACAGAGTC
                      ____________________________________________________________
consensus             GAGATCTTCCTGGGTGGCCTTGCCGGTGGGAAGCATGGAGGACCGGACGAGAACAGAGTC
 
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JMFF042D12+           AAGCGGCGAGGACACCGGCGGG-AGATCACAGGGGCGAGCCAAGGAAACCTTGAAGCAAG
JMFF017O21+           AAGCGGCGAGGACACCGGCGGG-AGATCACAGGGGCGAGCCAAGGAAACCTTGAAGCAAG
JMFF024M10+           AAGCGGCGAGGACACCGGCGGG-AGATCACAGGGGCGAGCCAAGGAAACCTTGAAGCAAG
JMFF035E08+           AAGCGGCGAGGACACCGGCGGG-AGATCACAGGGGCGAGCCAAGGAAACCTTGAAGCAAG
JMFF039C11+           AAGCGGCGAGGACACCGGCGGGAAGATCACAGGGGCGAGCCAAGGAAACCTTGAAGCAAG
JMFF010B08+           AAGCGGCGAGGACACCGGCGGGAAGATCACAGGGGCGAGCCAAGGAAACCTTGAAGCAAG
                      ____________________________________________________________
consensus             AAGCGGCGAGGACACCGGCGGG-AGATCACAGGGGCGAGCCAAGGAAACCTTGAAGCAAG
 
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JMFF042D12+           CAGTGGATAGAGGCTTGACGATAGAAAACTGTGGCGAGGAAGAGAAGAGAGAGGGATTTG
JMFF017O21+           CAGTGGATAGAGGCTTGACGATAGAAAACTGTGGCGAGGAAGAGAAGAGAGAGGGATTTG
JMFF024M10+           CAGTGGATAGAGGCTTGACGATAGAAAACTGTGGCGAGGAAGAGAAGAGAGAGGGATTTG
JMFF035E08+           CAGTGGATAGAGGCTTGACGATAGAAAACTGTGGCGAGGAAGAGAAGAGAGAGGGATTTG
JMFF039C11+           CAGTGGATAGAGGCTTGACGATAGAAAACTGTGGCGAGGAAGAGAAGAGAGAGGGATTTG
JMFF010B08+           CAGTGGATAGAGGCTTGACGATAGAAAACTGTGGCGAGGAAGAGAAGAGAGAGGGATTTG
                      ____________________________________________________________
consensus             CAGTGGATAGAGGCTTGACGATAGAAAACTGTGGCGAGGAAGAGAAGAGAGAGGGATTTG
 
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JMFF042D12+           TGGGTGTGAGATTAACCGCTACGGACATGGTGTGCATGAGGTTGGTTAGGTTGAAGGTGG
JMFF017O21+           TGGGTGTGAGATTAACCGCTACGGACATGGTGTGCATGAGGTTGGTTAGGTTGAAGGTGG
JMFF024M10+           TGGGTGTGAGATTAACCGCTACGGACATGGTGTGCATGAGGTTGGTTAGGTTGAAGGTGG
JMFF035E08+           TGGGTGTGAGATTAACCGCTACGGACATGGTGTGCATGAGGTTGGTTAGGTTGAAGGTGG
JMFF039C11+           TGGGTGTGAGATTAACCGCTACGGACATGGTGTGCATGAGGTTGGTTAGGTTGAAGGTGG
JMFF010B08+           TGGGTGTGAGATTAACCGCTACGGACATGGTGTGCATGAGGTTGGTTAGGTTGAAGGTGG
                      ____________________________________________________________
consensus             TGGGTGTGAGATTAACCGCTACGGACATGGTGTGCATGAGGTTGGTTAGGTTGAAGGTGG
 
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JMFF042D12+           CAGAGGAGTTGTGGCCTCTGGTAAAGTGAAGGTTGAGTTCTTCAACATCGGGCTTCACCA
JMFF017O21+           CAGAGGAGTTGTGGCCTCTGGTAAAGTGAAGGTTGAGTTCTTCAACATCGGGCTTCACCA
JMFF024M10+           CAGAGGAGTTGTGGCCTCTGGTAAAGTGAAGGTTGAGTTCTTCAACATCGGGCTTCACCA
JMFF035E08+           CAGAGGAGTTGTGGCCTCTGGTAAAGTGAAGGTTGAGTTCTTCAACATCGGGCTTCACCA
JMFF039C11+           CAGAGGAGTTGTGGCCTCTGGTAAAGTGAAGGTTGAGTTCTTCAACATCGGGCTTCACCA
JMFF010B08+           CAGAGGAGTTGTGGCCTCTGGTAAAGTGAAGGTTGAGTTCTTCAACATCGGGCTTCACCA
                      ____________________________________________________________
consensus             CAGAGGAGTTGTGGCCTCTGGTAAAGTGAAGGTTGAGTTCTTCAACATCGGGCTTCACCA
 
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JMFF042D12+           GCTTGTCCATGGCGGTAATGGGTAATCAAGATGGTGGAGAAGAAGAAGAATTTTTCAAGC
JMFF017O21+           GCTTGTCCATGGCGGTAATGGGTAATCAAGATGGTGGAGAAGAAGAAGAATTTTTCAAGC
JMFF024M10+           GCTTGTCCATGGCGGTAATGGGTAATCAAGATGGTGGAGAAGAAGAAGAATTTTTCAAGC
JMFF035E08+           GCTTGTCCATGGCGGTAATGGGTAATCAAGATGGTGGAGAAGAAGAAGAATTTTTCAAGC
JMFF039C11+           GCTTGTCCATGGCGGTAATGGGTAATCAAGATGGTGGAGAAGAAGAAGAATTTTTCAAGC
JMFF010B08+           GCTTGTCCATGGCGGTAATGGGTAATCAAGATGGTGGAGAAGAAGAAGAATTTTTCAAGC
                      ____________________________________________________________
consensus             GCTTGTCCATGGCGGTAATGGGTAATCAAGATGGTGGAGAAGAAGAAGAATTTTTCAAGC
 
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JMFF042D12+           TTTAGTTTAGTTTGGTGTTTTGGAATTTGGAGAATGGCGGCACATAGAAACGGGAATGGG
JMFF017O21+           TTTAGTTTAGTTTGGTGTTTTGGAATTTGGAGAATGGCGGCACATAGAAACGGGAATGGG
JMFF024M10+           TTTAGTTTAGTTTGGTGTTTTGGAATTTGGAGAATGGCGGCACATAGAAACGGGAATGGG
JMFF035E08+           TTTAGTTTAGTTTGGTGTTTTGGAATTTGGAGAATGGCGGCACATAGAAACGGGAATGGG
JMFF039C11+           TTTAGTTTAGTTTGGTGTTTTGGAATTTGGAGAATGGCGGCACATAGAAACGGGAATGGG
JMFF010B08+           TTTAGTTTAGTTTGGTGTTTTGGAATTTGGAGAATGGCGGCACATAGAAACGGGAATGGG
                      ____________________________________________________________
consensus             TTTAGTTTAGTTTGGTGTTTTGGAATTTGGAGAATGGCGGCACATAGAAACGGGAATGGG
 
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JMFF042D12+           ATGGATAGATGCTTTTCATTTGATAATAATGGACTAATGGGTGGAACATTATTTTGACAT
JMFF017O21+           ATGGATAGATGCTTTTCATTTGATAATAATGGACTAATGGGTGGAACATTATTTTTACAT
JMFF024M10+           ATGGATAGATGCTTTTCATTTGATAATAATGGACTAATGGGTGGAACATTATTTTTACAT
JMFF035E08+           ATGGATAGATGCTTTTCATTTGATAATAATGGACTAATGGGTGGAACATTATTTTTACAT
JMFF039C11+           ATGGATAGATGCTTTTCATTTGATAATAATGGACTAATGGGTGGAACATTATTTTTACAT
JMFF010B08+           ATGGATAGATGCTTTTCATTTGATAATAATGGACTAATGGGTGGAACATTATTTTTACAT
                      ____________________________________________________________
consensus             ATGGATAGATGCTTTTCATTTGATAATAATGGACTAATGGGTGGAACATTATTTTTACAT