Contig 000044:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005J13Sequence395000044 (4)gb|KJB72092.1|2e-13hypothetical protein B456_011G158300 [Gossypium raimondii]772008165 (3)ref|XP_010326838.1|5e-121PREDICTED: receptor like protein kinase S.2 [Solanum lycopersicum]
JMFF009L06Sequence533000044 (4)ref|XP_009801784.1|2e-42PREDICTED: receptor like protein kinase S.2 [Nicotiana sylvestris]719008165 (3)ref|XP_010326838.1|1e-106PREDICTED: receptor like protein kinase S.2 [Solanum lycopersicum]
JMFS149F02Sequence606000044 (4)ref|XP_006420905.1|1e-66hypothetical protein CICLE_v10004317mg [Citrus clementina] gb|ESR34145.1| hypoth
JMSF037C22Sequence460000044 (4)emb|CDO99461.1|5e-29unnamed protein product [Coffea canephora]633008165 (3)ref|XP_010326838.1|2e-93PREDICTED: receptor like protein kinase S.2 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFS149F02+                                     CGTGAACGCACCACCCCCGGAGCCGGACAAGATT
                      ____________________________________________________________
consensus                                       CGTGAACGCACCACCCCCGGAGCCGGACAAGATT
 
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JMFS149F02+           CCGGTGACGGAGATGAGCCACGGCCACCAGCTCCGCCGCGAAAGTCTTCTCAAACCGCTC
                      ____________________________________________________________
consensus             CCGGTGACGGAGATGAGCCACGGCCACCAGCTCCGCCGCGAAAGTCTTCTCAAACCGCTC
 
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JMFS149F02+           CCCTCTCTCCGCCAGGCACTTCACCGCCACCACCGTGCCATCACTAGGCAAAACCGCGCG
JMSF037C22+                                                              AACCGCGCG
JMFF009L06+                  TCCGCCAGGCACTTCACCGCCACCACCGTGCCATCACTAGGCAAAACCGCGCG
                      ____________________________________________________________
consensus             CCCTCTCTCCGCCAGGCACTTCACCGCCACCACCGTGCCATCACTAGGCAAAACCGCGCG
 
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JMFS149F02+           GTATACCTTCCCGAATCCCCCGCTGCCCAAGATTTCACTCTCGCTAAAACCATTAGACCC
JMSF037C22+           GTATACCTTCCCGAATCCCCCGNTGCCCAAGATTTCACTCTCGNTNAAACCATTAGACCC
JMFF009L06+           GTATACCTTCCCGAATCCCCCGCTGCCCAAGATTTCACTCTCGCTAAAACCATTAGACCC
                      ____________________________________________________________
consensus             GTATACCTTCCCGAATCCCCCGCTGCCCAAGATTTCACTCTCGCTAAAACCATTAGACCC
 
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JMFS149F02+           GACAAAGAGCTCGGAATAACTAAAAATCCTCGGATTATCACTCCCTACTTTATTCTCCTC
JMSF037C22+           GACAAAGAGCTCGGAATAANTAAAAATCCTNGGATTATCACTCCCTACTTTATTNTCCTC
JMFF005J13+                                    ATCCTCGGATTATCACTCCCTACTTTATTCTCCTC
JMFF009L06+           GACAAAGAGCTCGGAATAACTAAAAATCCTCGGATTATCACTCCCTACTTTATTCTCCTC
                      ____________________________________________________________
consensus             GACAAAGAGCTCGGAATAACTAAAAATCCTCGGATTATCACTCCCTACTTTATTCTCCTC
 
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JMFS149F02+           CCCCATCTGAACACCCTCCGTGTCGTGAAACTGCCCGGAAAACTGCTTCTTCTTCCCGGC
JMSF037C22+           CCCCATNTGAACACCCTCCGTGTCGTGAAACTGCCCGGAAAACTGCTTCTTCTTCCCGGC
JMFF005J13+           CCCCATCTGAACACCCTCCGTGTCGTGAAACTGCCCGGAAAACTGCTTCTTCTTCCCGGC
JMFF009L06+           CCCCATCTGAACACCCTCCGTGTCGTGAAACTGCCCGGAAAACTGCTTCTTCTTCCCGGC
                      ____________________________________________________________
consensus             CCCCATCTGAACACCCTCCGTGTCGTGAAACTGCCCGGAAAACTGCTTCTTCTTCCCGGC
 
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JMFS149F02+           GACCTCCGGGCTGCAAAAGCTAACCCACCCAGAACCCAAGAATCTGTGCAGCGATTCCTT
JMSF037C22+           GACCTCCGGGCTGCAAAAGCTAACCCACCCAGAACCCAAGAATCTGTGCAGCGATTCCTT
JMFF005J13+           GACCTCCGGGCTGCAAAAGCTAACCCACCCAGAACCCAAGAATCTGTGCAGCGATTCCTT
JMFF009L06+           GACCTCCGGGCTGCAAAAGCTAACCCACCCAGAACCCAAGAATCTGTGCAGCGATTCCTT
                      ____________________________________________________________
consensus             GACCTCCGGGCTGCAAAAGCTAACCCACCCAGAACCCAAGAATCTGTGCAGCGATTCCTT
 
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JMFS149F02+           GACAAATTCAACAACATGCCCCCCGCATCGCCGGTGCCGCGTTCCACCAACTCCAACCCC
JMSF037C22+           GACAAATTCAACAACATNCCCCCCGCATCGCCGGTGCCGCGTTCCACCAACTCCAACCCN
JMFF005J13+           GACAAATTCAACAACATGCCCCCCGCATCGCCGGTGCCGCGTTCCACCAACTCCAACCCC
JMFF009L06+           GACAAATTCAACAACATGCCCCCCGCATCGCCGGTGCCGCGTTCCACCAACTCCAACCCC
                      ____________________________________________________________
consensus             GACAAATTCAACAACATGCCCCCCGCATCGCCGGTGCCGCGTTCCACCAACTCCAACCCC
 
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JMFS149F02+           TTTTTCCGGCGCCGGCGCGGTTTCATCGTCATCTGGGAAGACGAAACAGAGGCGTTTGAT
JMSF037C22+           TTTTTCCGGCGCCGGCGCGGTTTCATCGTCATNTGGGAAGACGAAACAGAGGCGTNTGAT
JMFF005J13+           TTTTTCCGGCGCCGGCGCGGTTTCATCGTCATCTGGGAAGACGAAACAGAGGCGTTTGAT
JMFF009L06+           TTTTTCCGGCGCCGGCGCGGTTTCATCGTCATCTGGGAAGACGAAACAGAGGCGTTTGAT
                      ____________________________________________________________
consensus             TTTTTCCGGCGCCGGCGCGGTTTCATCGTCATCTGGGAAGACGAAACAGAGGCGTTTGAT
 
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JMFS149F02+           GTGCATCTTGGCGAGGTGTATGGAGTCTGTGAAGAAGAATTGATATCAATGGTGTGAAAT
JMSF037C22+           GTGCATCTTGGCGAGGTGTATGGAGTCTGTGAAGAAGAATTGATATCAATGGTGTGAAAT
JMFF005J13+           GTGCATCTTGGCGAGGTGTATGGAGTCTGTGAAGAAGAATTGATATCAATGGTGTGAAAT
JMFF009L06+           GTGCATCTTGGCGAGGTGTATGGAGTCTGTGAAGAAGAATTGATATCAATGGTGTGAAAT
                      ____________________________________________________________
consensus             GTGCATCTTGGCGAGGTGTATGGAGTCTGTGAAGAAGAATTGATATCAATGGTGTGAAAT
 
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JMFS149F02+           GGAAGTAGAAGAATGGGATGAGGAAAGG                                
JMSF037C22+           GGAAGTAGAAGAATGGGATGNGGAAAGG                                
JMFF005J13+           GGAAGTAGAAGAATGGGATGAGGAAAGGGTGAGTTTCATGATGGATAATTATGAATTTAT
JMFF009L06+           GGAAGTAGAAGAATGGGATGAGGAAAGGGTGAGTTTCATGATGGATAATTATGAATTTAT
                      ____________________________________________________________
consensus             GGAAGTAGAAGAATGGGATGAGGAAAGGGTGAGTTTCATGATGGATAATTATGAATTTAT