Contig 000041:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009J13Sequence529000041 (4)gb|AID47022.1|6e-68glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]597013639 (4)ref|XP_009608860.1|1e-82PREDICTED: betaine aldehyde dehydrogenase, chloroplastic-like [Nicotiana toment
JMFF024H03Sequence506000041 (4)gb|AID47022.1|4e-63glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]756013639 (4)ref|XP_009608860.1|2e-116PREDICTED: betaine aldehyde dehydrogenase, chloroplastic-like [Nicotiana toment
JMFF028I10Sequence529000041 (4)gb|AID47022.1|2e-67glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]733013639 (4)ref|XP_009608860.1|1e-110PREDICTED: betaine aldehyde dehydrogenase, chloroplastic-like [Nicotiana toment
JMSF047O03Sequence703000041 (4)ref|XP_009776732.1|1e-109PREDICTED: betaine aldehyde dehydrogenase, chloroplastic-like isoform X2 [Nicot725013639 (4)gb|AII99844.1|1e-115aminoaldehyde dehydrogenase 2 [Nicotiana tabacum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047O03+                                            CAATATAAGACGAGATGTGNCACTACA
                      ____________________________________________________________
consensus                                              CAATATAAGACGAGATGTGNCACTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047O03+           AATTTGGCCATTTGTCCAGAAGCAACCAAAAAGCGCCCACTCAACAGCTTTATCAAGGTC
                      ____________________________________________________________
consensus             AATTTGGCCATTTGTCCAGAAGCAACCAAAAAGCGCCCACTCAACAGCTTTATCAAGGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047O03+           CCCAACATCCTCAAATATGACAATAGGACTTTTTCCACCAAGTTCCAGTGTTACTGGTTT
                      ____________________________________________________________
consensus             CCCAACATCCTCAAATATGACAATAGGACTTTTTCCACCAAGTTCCAGTGTTACTGGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047O03+           GACAAGTGGAGCTGCAGCAGTCATGATTTTGACTCCTGTGGCCAAGCTTCCTGTAAATGA
                      ____________________________________________________________
consensus             GACAAGTGGAGCTGCAGCAGTCATGATTTTGACTCCTGTGGCCAAGCTTCCTGTAAATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047O03+           AACCTTGTCAACATGAGGATGAGTTGCCAATGGAGCACCAGCTTCTGGCCCCAAACCAGT
                      ____________________________________________________________
consensus             AACCTTGTCAACATGAGGATGAGTTGCCAATGGAGCACCAGCTTCTGGCCCCAAACCAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047O03+           TAGAATGTTAAGGGCTCCACGGGGGAGACCAACCTCTCTACAAATTTCACCCAACTCTAA
                      ____________________________________________________________
consensus             TAGAATGTTAAGGGCTCCACGGGGGAGACCAACCTCTCTACAAATTTCACCCAACTCTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047O03+           ACAGGTAATAGAAGCTAGTTCAGATGGCTTAAGTATAGCAGCACACCCAGCTGCCAGTGC
                      ____________________________________________________________
consensus             ACAGGTAATAGAAGCTAGTTCAGATGGCTTAAGTATAGCAGCACACCCAGCTGCCAGTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047O03+           AGGAGCGACTTTCCAGATAGCCATCAACAAAGGATAATTCCATGGAGTAATCAACCCAAC
                      ____________________________________________________________
consensus             AGGAGCGACTTTCCAGATAGCCATCAACAAAGGATAATTCCATGGAGTAATCAACCCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047O03+           AACCCCAATGGGTTCTCTAAGAACATAACTCTTAATTGACTCCAAATGAAGAGGAATAGG
JMFF024H03+                                             ATTGACTCCAAATGAAGAGGAATAGG
JMFF028I10+                                                        ATGAAGAGGAATAGG
JMFF009J13+                                                        ATGAAGAGGAATAGG
                      ____________________________________________________________
consensus             AACCCCAATGGGTTCTCTAAGAACATAACTCTTAATTGACTCCAAATGAAGAGGAATAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047O03+           AGTCTTTTGTCTTGAATCCAAAGCCTCAGCAAGGCCTGCATAGTACTCAATCGTTGATGA
JMFF024H03+           AGTCTTTTGTCTTGAATCCAAAGCCTCAGCAAGGCCTGCATAGTACTCAATCGTTGATGA
JMFF028I10+           AGTCTTTTGTCTTGAATCCAAAGCCTCAGCAAGGCCTGCATAGTACTCAATCGTTGATGA
JMFF009J13+           AGTCTTTTGTCTTGAATCCAAAGCCTCAGCAAGGCCTGCATAGTACTCAATCGTTGATGA
                      ____________________________________________________________
consensus             AGTCTTTTGTCTTGAATCCAAAGCCTCAGCAAGGCCTGCATAGTACTCAATCGTTGATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047O03+           AACATCATCCATATCTGCATCCGCTTCCACCAACGGCTTCCCACTATCAATGGATTCAAG
JMFF024H03+           AACATCATCCATATCTGCATCCGCTTCCACCAACGGCTTCCCACTATCAATGGATTCAAG
JMFF028I10+           AACATCATCCATATCTGCATCCGCTTCCACCAACGGCTTCCCACTATCAATGGATTCAAG
JMFF009J13+           AACATCATCCATATCTGCATCCGCTTCCACCAACGGCTTCCCACTATCAATGGATTCAAG
                      ____________________________________________________________
consensus             AACATCATCCATATCTGCATCCGCTTCCACCAACGGCTTCCCACTATCAATGGATTCAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047O03+           TGGTACTAGCTCAGGCTTCCTCTCCTTAACCTT                           
JMFF024H03+           TGGTACTAGCTCAGGCTTCCTCTCCTTAACCTTTGCAGCAATAGAACGCAAATATTTCGC
JMFF028I10+           TGGTACTAGCTCAGGCTTCCTCTCCTTAACCTTTGCAGCAATAGAACGCAAATATTTCGC
JMFF009J13+           TGGTACTAGCTCAGGCTTCCTCTCCTTAACCTTTGCAGCAATAGAACGCAAATATTTCGC
                      ____________________________________________________________
consensus             TGGTACTAGCTCAGGCTTCCTCTCCTTAACCTTTGCAGCAATAGAACGCAAATATTTCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024H03+           CCGTTGTGCCCCTGTCGTTGAGCCCCACTCTCCGGCGAGAGCTCTCCGAGCAGCTTCCAC
JMFF028I10+           CCGTTGTGCCCCTGTCGTTGAGCCCCACTCTCCGGCGAGAGCTCTCCGAGCAGCTTCCAC
JMFF009J13+           CCGTTGTGCCCCTGTCGTTGAGCCCCACTCTCCGGCGAGAGCTCTCCGAGCAGCTTCCAC
                      ____________________________________________________________
consensus             CCGTTGTGCCCCTGTCGTTGAGCCCCACTCTCCGGCGAGAGCTCTCCGAGCAGCTTCCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024H03+           CGCTATATTCACGTCTTCCGCTGTAGCTCCCGGAATGTCACCAATGACTAGTTCAGTAGC
JMFF028I10+           CGCTATATTCACGTCTTCCGCTGTAGCTCCCGGAATGTCACCAATGACTAGTTCAGTAGC
JMFF009J13+           CGCTATATTCACGTCTTCCGCTGTAGCTCCCGGAATGTCACCAATGACTAGTTCAGTAGC
                      ____________________________________________________________
consensus             CGCTATATTCACGTCTTCCGCTGTAGCTCCCGGAATGTCACCAATGACTAGTTCAGTAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024H03+           GGGATTAATAATCGGAAGACGATTCTTCTTGACAGGTTCTCTCCATTCGCCGTCGATGAA
JMFF028I10+           GGGATTAATAATCGGAAGACGATTCTTCTTGACAGGTTCTCTCCATTCGCCGTCGATGAA
JMFF009J13+           GGGATTAATAATCGGAAGACGATTCTTCTTGACAGGTTCTCTCCATTCGCCGTCGATGAA
                      ____________________________________________________________
consensus             GGGATTAATAATCGGAAGACGATTCTTCTTGACAGGTTCTCTCCATTCGCCGTCGATGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024H03+           CAGCATGCGACTCGGTATGCGGATATTCGTAGCCGCCATATCTCCCAGGTATGATCGCGA
JMFF028I10+           CAGGATGCGACTCGGTATGCGGATATTCGTAGCCGCCATATCTCCCAGGTATGATCGCGA
JMFF009J13+           CAGCATGCGACTCGGTATGCGGATATTCGTAGCCGCCATATCTCCCAGGTATGATCGCGA
                      ____________________________________________________________
consensus             CAGCATGCGACTCGGTATGCGGATATTCGTAGCCGCCATATCTCCCAGGTATGATCGCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024H03+           TTATCACAGTTCAGTTCAGAGTGTTTACTCAGTAAGAACTCAGTTCAGAAGTGTTTACTC
JMFF028I10+           TTATCACAGTTCAGTTCAGAGTGTTTACTCAGTAAGAACTCAGTTCAGAAGTGTTTACTC
JMFF009J13+           TTATCACAGTTCAGTTCAGAGTGTTTACTCAGTAAGAACTCAGTTCAGAAGTGTTTACTC
                      ____________________________________________________________
consensus             TTATCACAGTTCAGTTCAGAGTGTTTACTCAGTAAGAACTCAGTTCAGAAGTGTTTACTC