Contig 000037:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008P20Sequence575000037 (2)ref|XP_009358597.1|6e-63PREDICTED: endoglucanase 6-like [Pyrus x bretschneideri]695006901 (3)gb|ABK96199.1|3e-47unknown [Populus trichocarpa]
JMFF036G16Sequence582000037 (2)dbj|BAC22691.1|2e-63endo-1,4-beta-D-glucanase [Pyrus communis]697006901 (3)gb|ABK96199.1|3e-47unknown [Populus trichocarpa]

Alignment

This contig is upended


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JMFF036G16+                             TCCGCATATCCACTAACGGATTGGTAGTATCTCTGTGCGACG
JMFF008P20+                                    ATCCACTAACGGATTGGTAGTATCTCTGTGCGACG
                      ____________________________________________________________
consensus                               TCCGCATATCCACTAACGGATTGGTAGTATCTCTGTGCGACG
 
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JMFF036G16+           GTTATGCTGCTGTCATATTTGCCCCGGTACTTGTCCGCAAACTCAAACAGCTGGTAGGCG
JMFF008P20+           GTTATGCTGCTGTCATATTTGCCCCGGTACTTGTCCGCAAACTCAAACAGCTGGTAGGCG
                      ____________________________________________________________
consensus             GTTATGCTGCTGTCATATTTGCCCCGGTACTTGTCCGCAAACTCAAACAGCTGGTAGGCG
 
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JMFF036G16+           TGCTGGAGCAGCTCATTGGAGTAGGAAGGGTTGGAGCGGCGGAAGACGATGGATGCGGCG
JMFF008P20+           TGCTGGAGCAGCTCATTGGAGTAGGAAGGGTTGGAGCGGCGGAAGACGATGGATGCGGCG
                      ____________________________________________________________
consensus             TGCTGGAGCAGCTCATTGGAGTAGGAAGGGTTGGAGCGGCGGAAGACGATGGATGCGGCG
 
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JMFF036G16+           GCCATGGCGGCGGCGGTCTCGCCGGCGAGGTCTGATCCCGGCCGGCTTGGGTCGATCTTG
JMFF008P20+           GCCATGGCGGCGGCGGTCTCGCCGGCGAGGTCTGATCCCGGCCGGCTTGGGTCGATCTTG
                      ____________________________________________________________
consensus             GCCATGGCGGCGGCGGTCTCGCCGGCGAGGTCTGATCCCGGCCGGCTTGGGTCGATCTTG
 
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JMFF036G16+           TAAGCCGTCCTTGAAGTCGTCATGTCCTCCGGCCTCTGCCAGCAGAAATGGTCGGTTCAC
JMFF008P20+           TAAGCCGTCCTTGAAGTCGTCATGTCCTCCGGCCTCTGCCAGCAGAAATGGTCGGTTCAC
                      ____________________________________________________________
consensus             TAAGCCGTCCTTGAAGTCGTCATGTCCTCCGGCCTCTGCCAGCAGAAATGGTCGGTTCAC
 
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JMFF036G16+           CATCTCCCACCTCTCCATAGAGGACGTTGGGTTCAGGGTGAGCTTTGATGAAGTAGTCGG
JMFF008P20+           CATCTCCCACCTCTCCATAGAGGACGTTGGGTTCAGGGTGAGCTTTGATGAAGTAGTCGG
                      ____________________________________________________________
consensus             CATCTCCCACCTCTCCATAGAGGACGTTGGGTTCAGGGTGAGCTTTGATGAAGTAGTCGG
 
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JMFF036G16+           TGCCCCACTTAACGGCGTCCATGGCGTGGCCAAGCTCCCCACTGGCCGCCATTTGTTTGC
JMFF008P20+           TGCCCCACTTAACGGCGTCCATGGCGTGGCCAAGCTCCCCACTGGCCGCCATTTGTTTGC
                      ____________________________________________________________
consensus             TGCCCCACTTAACGGCGTCCATGGCGTGGCCAAGCTCCCCACTGGCCGCCATTTGTTTGC
 
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JMFF036G16+           CATATTCGATGATACTCCAGGACATCATAGATCCTGATCTTTGGATCTGGCACACCACGG
JMFF008P20+           CATATTCGATGATACTCCAGGACATCATAGATCCTGATCTTTGGATCTGGCACACCACGG
                      ____________________________________________________________
consensus             CATATTCGATGATACTCCAGGACATCATAGATCCTGATCTTTGGATCTGGCACACCACGG
 
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JMFF036G16+           CAGTACCTTGATTTCGGGTAAGGCTTGTTCTTAATCTGACGGTAACACCTTGCTGGTCTT
JMFF008P20+           CAGTACCTTGATTTCGGGTAAGGCTTGTTCTTAATCTGACGGTAACACCTTGCTGGTCTT
                      ____________________________________________________________
consensus             CAGTACCTTGATTTCGGGTAAGGCTTGTTCTTAATCTGACGGTAACACCTTGCTGGTCTT
 
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JMFF036G16+           CTTCCCATGGCGACGTCTGCTTGCGGCTCGGCTGATCTGCGGCAAATCGAAGTGAAAAAC
JMFF008P20+           CTTCCCATGGCGACGTCTGCTTGCGGCTCGGCTGATCTGCGGCAAATCGAAGTGAAAAAC
                      ____________________________________________________________
consensus             CTTCCCATGGCGACGTCTGCTTGCGGCTCGGCTGATCTGCGGCAAATCGAAGTGAAAAAC