Contig 000035:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF008N12-                                                ATTATGATGAAAATTAACACTT
                      ____________________________________________________________
consensus                                                   ATTATGATGAAAATTAACACTT
 
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rJMFF008N12-          ACATTGACGAATGGAATTACAAGAAACAAAAGGGACAGCCTTGATTAAGATAATATAATT
                      ____________________________________________________________
consensus             ACATTGACGAATGGAATTACAAGAAACAAAAGGGACAGCCTTGATTAAGATAATATAATT
 
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rJMFF008N12-          ACCCACATTACTAAATTCTCTTATAATCAAGAGATTAAATGTTTAAAAATGGGTTAACCC
                      ____________________________________________________________
consensus             ACCCACATTACTAAATTCTCTTATAATCAAGAGATTAAATGTTTAAAAATGGGTTAACCC
 
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rJMFF008N12-          TTGCCACGAACCCAGCCGGCCGGCCGGCGAACTGAAAGTCTGAAACATACTGCCGATCAG
JMFN008L12+                                                                     AG
                      ____________________________________________________________
consensus             TTGCCACGAACCCAGCCGGCCGGCCGGCGAACTGAAAGTCTGAAACATACTGCCGATCAG
 
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rJMFF008N12-          CCAAATTCGCTCTCTTCCATTTTTCTCACTATTTCTGCTTCGATTTTCTACGCTACGAAT
JMFN008L12+           CCAAATTCGCTCTCTTCCATTTTTCTCACTATTTCTGCTTCGATTTTCTACGCTACGAAT
JMFF008N12+                                                                   GAAT
                      ____________________________________________________________
consensus             CCAAATTCGCTCTCTTCCATTTTTCTCACTATTTCTGCTTCGATTTTCTACGCTACGAAT
 
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rJMFF008N12-          ACGCAAATCATTAAACTTTTTTTTGGAGAAGAAAAATTTACAAACTGATTATATACCATA
JMFN008L12+           ACGCAAATCATTAAAC-TTTTTTTGGAGAAGAAAAATTTACAAACTGATTATATACCATA
JMFF008N12+           ACGCAAATCATTAAACTTTTTTTTGGAGAAGAAAAATTTACAAACTGATTATATACCATA
                      ____________________________________________________________
consensus             ACGCAAATCATTAAACTTTTTTTTGGAGAAGAAAAATTTACAAACTGATTATATACCATA
 
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rJMFF008N12-          AGAACAATAGAGCCGAGAACATGGGAATCCGCCTCCTCCGCCACTTGACGACGGTTACAA
JMFN008L12+           AGAACAATAGAGCCGAGAACATGGGAATCCGCCTCCTCCGCCACTTGACGACGGTTACAA
JMFF008N12+           AGAACAATAGAGCCGAGAACATGGGAATCCGCCTCCTCCGCCACTTGACGACGGTTACAA
                      ____________________________________________________________
consensus             AGAACAATAGAGCCGAGAACATGGGAATCCGCCTCCTCCGCCACTTGACGACGGTTACAA
 
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rJMFF008N12-          GCCGGCCCGGCCCAATCGCCGCTCAACACGCATAGAAATCCACCAACTCATCCAGAGATT
JMFN008L12+           GCCGGCCCGGCCCAATCGCCGCTCAACACGCATAGAAATCCACCAACTCATCCAGAGATT
JMFF008N12+           GCCGGCCCGGCCCAATCGCCGCTCAACACGCATAGAAATCCACCAACTCATCCAGAGATT
                      ____________________________________________________________
consensus             GCCGGCCCGGCCCAATCGCCGCTCAACACGCATAGAAATCCACCAACTCATCCAGAGATT
 
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rJMFF008N12-          CCGGCTGGGGATCCGCATTCTCCAACATCCACAGCAGGTGCTCGAACAGCACGACTTCGC
JMFN008L12+           CCGGCTGGGGATCCGCATTCTCCAACATCCACAGCAGGTGCTCGAACAGCACGACTTCGC
JMFF008N12+           CCGGCTGGGGATCCGCATTCTCCAACATCCACAGCAGGTGCTCGAACAGCACGACTTCGC
                      ____________________________________________________________
consensus             CCGGCTGGGGATCCGCATTCTCCAACATCCACAGCAGGTGCTCGAACAGCACGACTTCGC
 
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rJMFF008N12-          AGCCGACGACGGTGACGGAATTGTCCGCGTCGTCGCCGGAGCGGTCCACCAGCTCGCGGA
JMFN008L12+           AGCCGACGACGGTGACGGAATTGTCCGCGTCGTCGCCGGAGCGGTCCACCAGCTCGCGGA
JMFF008N12+           AGCCGACGACGGTGACGGAATTGTCCGCGTCGTCGCCGGAGCGGTCCACCAGCTCGCGGA
                      ____________________________________________________________
consensus             AGCCGACGACGGTGACGGAATTGTCCGCGTCGTCGCCGGAGCGGTCCACCAGCTCGCGGA
 
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rJMFF008N12-          CCAGCGGATGTTCGATGACGCTCGAGCTGACGAGGTACCGGCGGCGAGATTTCCCGACGT
JMFN008L12+           CCAGCGGATGTTCGATGACGCTCGAGCTGACGAGGTACCGGCGGCGAGATTTCCCGACGT
JMFF008N12+           CCAGCGGATGTTCGATGACGCTCGAGCTGACGAGGTACCGGCGGCGAGATTTCCCGACGT
                      ____________________________________________________________
consensus             CCAGCGGATGTTCGATGACGCTCGAGCTGACGAGGTACCGGCGGCGAGATTTCCCGACGT
 
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rJMFF008N12-          AGACCGGGCGGAGATCCTTGGCGTAGCTGTTGTTATTGTTATTGCTAG            
JMFN008L12+           AGACCGGGCGGAGATCCTTGGCGTAGCTGTTGTTATTGTTATTGCTAGACTCGTCGTCGG
JMFF008N12+           AGACCGGGCGGAGATCCTTGGCGTAGCTGTTGTTATTGTTATTGCTAGACTCGTCGTCGG
                      ____________________________________________________________
consensus             AGACCGGGCGGAGATCCTTGGCGTAGCTGTTGTTATTGTTATTGCTAGACTCGTCGTCGG
 
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JMFN008L12+           AAGAGGCGGTGGCGGCGGCGGCCACGACGGAGCTTCCGTTGCCGCGGCCGAGCTTGAAGG
JMFF008N12+           AAGAGGCGGTGGCGGCGGCGGCCACGACGGAGCTTCCGTTGCCGCGGCCGAGCTTGAAGG
                      ____________________________________________________________
consensus             AAGAGGCGGTGGCGGCGGCGGCCACGACGGAGCTTCCGTTGCCGCGGCCGAGCTTGAAGG
 
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JMFN008L12+           ACTGCATTTTCTTCAGTACGGATTTGAGCTTCGTGAGCTTTCCACCTTTAGCCATGGCGA
JMFF008N12+           ACTGCATTTTCTTCAGTACGGATTTGAGCTTCGTGAGCTTTCCACCTTTAGCCATGGCGA
                      ____________________________________________________________
consensus             ACTGCATTTTCTTCAGTACGGATTTGAGCTTCGTGAGCTTTCCACCTTTAGCCATGGCGA
 
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JMFN008L12+           TCGAACAGAGGAGATGAGAGAAGA                                    
JMFF008N12+           TCGAACAGAGGAGATGAGAGAAGAGAGAGAGAGAGAACAGAGGGGTTTTAGGCTGGGTTC
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consensus             TCGAACAGAGGAGATGAGAGAAGAGAGAGAGAGAGAACAGAGGGGTTTTAGGCTGGGTTC