Contig 000033:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008L05Sequence605000033 (7)emb|CDP04035.1|3e-53unnamed protein product [Coffea canephora]718008161 (11)ref|XP_011089543.1|1e-74PREDICTED: root phototropism protein 2-like [Sesamum indicum]
JMFF015J14Sequence537000033 (7)ref|XP_011089543.1|8e-104PREDICTED: root phototropism protein 2-like [Sesamum indicum]682008161 (11)ref|XP_009777101.1|5e-91PREDICTED: root phototropism protein 2 [Nicotiana sylvestris]
JMFF019D10Sequence565000033 (7)ref|XP_011089543.1|6e-93PREDICTED: root phototropism protein 2-like [Sesamum indicum]709008161 (11)ref|XP_011089543.1|5e-97PREDICTED: root phototropism protein 2-like [Sesamum indicum]
JMFF019K15Sequence572000033 (7)ref|XP_011089543.1|5e-94PREDICTED: root phototropism protein 2-like [Sesamum indicum]765008161 (11)ref|XP_011089543.1|1e-109PREDICTED: root phototropism protein 2-like [Sesamum indicum]
JMFF030L20Sequence185000033 (7)emb|CDP04035.1|3e-15unnamed protein product [Coffea canephora]743008161 (11)ref|XP_011089543.1|8e-106PREDICTED: root phototropism protein 2-like [Sesamum indicum]
JMFF034D23Sequence437000033 (7)emb|CDP04035.1|1e-78unnamed protein product [Coffea canephora]553008161 (11)ref|XP_009777101.1|1e-60PREDICTED: root phototropism protein 2 [Nicotiana sylvestris]
JMSF044N08Sequence727000033 (7)ref|XP_011089543.1|3e-130PREDICTED: root phototropism protein 2-like [Sesamum indicum]721008161 (11)ref|XP_011089543.1|1e-103PREDICTED: root phototropism protein 2-like [Sesamum indicum]

Alignment

This contig is upended


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JMSF044N08+                   CGCAGCGACCGTTCCGCGTACGTTATTATCGCGCTTGCTAACGTCAACGGCT
                      ____________________________________________________________
consensus                     CGCAGCGACCGTTCCGCGTACGTTATTATCGCGCTTGCTAACGTCAACGGCT
 
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JMFF015J14+                                                  AGAACGCGACGTCGAGAATCG
JMSF044N08+           TCGCGGTGCGAGACCTCATCGTAGCGATAATTCTGGCGAAGAACGCGACGTCGAGAATCG
                      ____________________________________________________________
consensus             TCGCGGTGCGAGACCTCATCGTAGCGATAATTCTGGCGAAGAACGCGACGTCGAGAATCG
 
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JMFF019D10+                                                            CTCCACGCACG
JMFF019K15+                                                            CTCCACGCACG
JMFF015J14+           TTAGCTCCTCCGTCCACCAATTCGGCGGCGACCTGCTCGGAAAATTCGCCTCCACGCACG
JMSF044N08+           TTAGCTCCTCCGTCCACCAATTCGGCGGCGACCTGCTCGGAAAATTCGCCTCCACGCACG
                      ____________________________________________________________
consensus             TTAGCTCCTCCGTCCACCAATTCGGCGGCGACCTGCTCGGAAAATTCGCCTCCACGCACG
 
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JMFF019D10+           CCTTTGCACTCGCTAATTCCACGCATCTCTGCACGATTTTCAGATCTTCGGCCAGCGGGA
JMFF019K15+           CCTTTGCACTCGCTAATTCCACGCATCTCTGCACGATTTTCAGATCTTCGGCCAGCGGGA
JMFF015J14+           CCTTTGCACTCGCTAATTCCACGCATCTCTGCACGATTTTCAGATCTTCGGCCAGCGGGA
JMSF044N08+           CCTTTGCACTCGCTAATTCCACGCATCTCTGCACGATTTTCAGATCTTCGGCCAGCGGGA
JMFF008L05+                                                                  CGGGA
                      ____________________________________________________________
consensus             CCTTTGCACTCGCTAATTCCACGCATCTCTGCACGATTTTCAGATCTTCGGCCAGCGGGA
 
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JMFF034D23+                                                                    CCT
JMFF019D10+           GAAGCTCCTCGCAGGATTTAAGCACGACAAGCGCGCCGGAAAGGCTGGACAGGGCCACCT
JMFF019K15+           GAAGCTCCTCGCAGGATTTAAGCACGACAAGCGCGCCGGAAAGGCTGGACAGGGCCACCT
JMFF015J14+           GAAGCTCCTCGCAGGATTTAAGCACGACAAGCGCGCCGGAAAGGCTGGACAGGGCCACCT
JMSF044N08+           GAAGCTCCTCGCAGGATTTAAGCACGACAAGCGCGCCGGAAAGGCTGGACAGGGCCACCT
JMFF008L05+           GAAGCTCCTCGCAGGATTTAAGCACGACAAGCGCGCCGGAAAGGCTGGACAGGGCCACCT
                      ____________________________________________________________
consensus             GAAGCTCCTCGCAGGATTTAAGCACGACAAGCGCGCCGGAAAGGCTGGACAGGGCCACCT
 
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JMFF034D23+           GCGACAGAAAATCCTCCGTCCGACCGGCGAGGTTGTTGTCGCAGTACTTGTCCGTCATCT
JMFF019D10+           GCGACAGAAAATCCTCCGTCCGACCGGCGAGGTTGTTGTCGCAGTACTTGTCCGTCATCT
JMFF019K15+           GCGACAGAAAATCCTCCGTCCGACCGGCGAGGTTGTTGTCGCAGTACTTGTCCGTCATCT
JMFF015J14+           GCGACAGAAAATCCTCCGTCCGACCGGCGAGGTTGTTGTCGCAGTACTTGTCCGTCATCT
JMSF044N08+           GCGACAGAAAATCCTCCGTCCGACCGGCGAGGTTGTTGTCGCAGTACTTGTCCGTCATCT
JMFF008L05+           GCGACAGAAAATCCTCCGTCCGACCGGCGAGGTTGTTGTCGCAGTACTTGTCCGTCATCT
                      ____________________________________________________________
consensus             GCGACAGAAAATCCTCCGTCCGACCGGCGAGGTTGTTGTCGCAGTACTTGTCCGTCATCT
 
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JMFF034D23+           GAAGATACTCGGCGGCGCAACGCAGAGCCGCCACGTT-ATGTACAGTGATCTCGAAGTTG
JMFF019D10+           GAAGATACTCGGCGGCGCAACGCAGAGCCGCCACGTT-ATGTACAGTGATCTCGAAGTTG
JMFF019K15+           GAAGATACTCGGCGGCGCAACGCAGAGCCGCCACGTT-ATGTACAGTGATCTCGAAGTTG
JMFF015J14+           GAAGATACTCGGCGGCGCAACGCAGAGCCGCCACGTT-ATGTACAGTGATCTCGAAGTTG
JMSF044N08+           GAAGATACTCGGCGGCGCAACGCAGAGCCGCCACGTT-ATGTACAGTGATCTCGAAGTTG
JMFF008L05+           GAAGATACTCGGCGGCGCAACGCAGAGCCGCCACGTTAATGTACAGTGATCTCGAAGTTG
                      ____________________________________________________________
consensus             GAAGATACTCGGCGGCGCAACGCAGAGCCGCCACGTT-ATGTACAGTGATCTCGAAGTTG
 
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JMFF034D23+           ACTCCATAGCAGAACTTCGCCG-CCCTTTCGAAGATCTCAGGGCCGCCGGGAATCCCAGA
JMFF019D10+           ACTCCATAGCAGAACTTCGCCG-CCCTTTCGAAGATCTCAGGGCCGCCGGGAATCCCAGA
JMFF019K15+           ACTCCATAGCAGAACTTCGCCG-CCCTTTCGAAGATCTCAGGGCCGCCGGGAATCCCAGA
JMFF015J14+           ACTCCATAGCAGAACTTCGCCG-CCCTTTCGAAGATCTCAGGGCCGCCGGGAATCCCAGA
JMSF044N08+           ACTCCATAGCAGAACTTCGCCG-CCCTTTCGAAGATCTCAGGGCCGCCGGGAATCCCAGA
JMFF008L05+           ACTCCATAGCAGAACTTCGCCGCCCCTTTCGAAGATCTCAGGGCCGCCGGGAATCCCAGA
                      ____________________________________________________________
consensus             ACTCCATAGCAGAACTTCGCCG-CCCTTTCGAAGATCTCAGGGCCGCCGGGAATCCCAGA
 
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JMFF034D23+           CAGATTTATCCTCGTTAAATCAGCTTCTTTACTGTCCATAATCAATTTCCTTATATAATT
JMFF019D10+           CAGATTTATCCTCGTTAAATCAGCTTCTTTACTGTCCATAATCAATTTCCTTATATAATT
JMFF019K15+           CAGATTTATCCTCGTTAAATCAGCTTCTTTACTGTCCATAATCAATTTCCTTATATAATT
JMFF015J14+           CAGATTTATCCTCGTTAAATCAGCTTCTTTACTGTCCATAATCAATTTCCTTATATAATT
JMSF044N08+           CAGATTTATCCTCGTTAAATCAGCTTCTTTACTGTCCATAATCAATTTCCTTATATAATT
JMFF008L05+           CAGATTTATCCTCGTTAAATCAGCTTCTTTACTGTCCATAATCAATTTCCTTATATAATT
                      ____________________________________________________________
consensus             CAGATTTATCCTCGTTAAATCAGCTTCTTTACTGTCCATAATCAATTTCCTTATATAATT
 
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JMFF034D23+           GCTCTTCGCCACAAGCATAAACTTGTGAAGGGAAAAACTGGCTTCCCCGACTTCAACAAT
JMFF030L20+                      CAAGCATAAACTNGTGAAGGGAAAAACTGGCTTCCCCGACTTCAACAAT
JMFF019D10+           GCTCTTCGCCACAAGCATAAACTTGTGAAGGGAAAAACTGGCTTCCCCGACTTCAACAAT
JMFF019K15+           GCTCTTCGCCACAAGCATAAACTTGTGAAGGGAAAAACTGGCTTCCCCGACTTCAACAAT
JMFF015J14+           GCTCTTCGCCACAAGCATAAACTTGTGAAGGGAAAAACTGGCTTCCCCAACTTCAACAAT
JMSF044N08+           GCTCTTCGCCACAAGCATAAACTTGTGAAGGGAAAAACTGGCTTCCCCGACTTCAACAAT
JMFF008L05+           GCTCTTCGCCACAAGCATAAACTTGTGAAGGGAAAAACTGGCTTCCCCGACTCCAACAAT
                      ____________________________________________________________
consensus             GCTCTTCGCCACAAGCATAAACTTGTGAAGGGAAAAACTGGCTTCCCCGACTTCAACAAT
 
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JMFF034D23+           AACATCAGTGGGAATTTCTTGAGAGAAAACCCATTGGCCGGTTCTCTCCATGGCAAGCGA
JMFF030L20+           AACATCAGTGGGAATTTNTNGAGAGAAAACCCATTGNCCGGTTCTCTCCANGGCAAGCGA
JMFF019D10+           AACATCAGTGGGAATTTCTTGAGAGAAAACCCATTGGCCGGTTCTCTCCATGGCAAGCGA
JMFF019K15+           AACATCAGTGGGAATTTCTTGAGAGAAAACCCATTGGCCGGTTCTCTCCATGGCAAGCGA
JMFF015J14+           AACATCAGTGGGAATTTCTTGAGAGAAAACCCATTGGC                      
JMSF044N08+           AACATCAGTGGGAATTTCTTGAGAGAAAACCCATTGGCCGGTTCTCTCCATGGCAAGCGA
JMFF008L05+           AACATCAGTGGGAATTTCTTGAGAGAAAACCCATTGGCCGGTTCTCTCCATGGCAAGCGA
                      ____________________________________________________________
consensus             AACATCAGTGGGAATTTCTTGAGAGAAAACCCATTGGCCGGTTCTCTCCATGGCAAGCGA
 
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JMFF034D23+           AAGCCGGGTGGCGGCGGATTTCAGAGGGGAAGCCATATTTGAAGGCTTGAAGCTTTTGGG
JMFF030L20+           AAGCCGGGTGGCGGCGGATTTCAGAGGGGAAGCCATATTTGAAGGCNTGAAGCTTTTGGG
JMFF019D10+           AAGCCGGGTGGCGGCGGATTTCAGAGGGGAAGCCATATTTGAAGGCTTGAAGCTTTTGGG
JMFF019K15+           AAGCCGGGTGGCGGCGGATTTCAGAGGGGAAGCCATATTTGAAGGCTTGAAGCTTTTGGG
JMSF044N08+           AAGCCGGGTGGCGGCGGATTTCAGAGGGGAAGCCATATTTGAAGGCTTGAAGCTTTTGGG
JMFF008L05+           AAGCCGGGTGGCGGCGGATTTCAGAGGGGAAGCCATATTTGAAGGCTTGAAGCTTTTGGG
                      ____________________________________________________________
consensus             AAGCCGGGTGGCGGCGGATTTCAGAGGGGAAGCCATATTTGAAGGCTTGAAGCTTTTGGG
 
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JMFF034D23+           AGGGAGAGATTAGGAT                                            
JMFF030L20+           AGGGAGAGATTAGGAT                                            
JMFF019D10+           AGGGAGAGATTAGGAT                                            
JMFF019K15+           AGGGAGAGATTAG                                               
JMSF044N08+           AGGGAGAGATTAGGAT                                            
JMFF008L05+           AGGGAGAGATTAGGATAAGATGCAGAAATCTGGTTTTGGGTTATATAGATAGAGAGATGT
                      ____________________________________________________________
consensus             AGGGAGAGATTAGGATAAGATGCAGAAATCTGGTTTTGGGTTATATAGATAGAGAGATGT
 
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JMFF008L05+           AACATTATTTGTCATGGTGTAACTTTTCTTTTTTCCTTTTTTTGGATGAAAAGGAAACCC
                      ____________________________________________________________
consensus             AACATTATTTGTCATGGTGTAACTTTTCTTTTTTCCTTTTTTTGGATGAAAAGGAAACCC