Contig 000026:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF024C06+                                                                     CA
                      ____________________________________________________________
consensus                                                                       CA
 
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JMSF024C06+           TCAGCCATAGCCACAATTCTATCACGGAAGACCTGAGCAGGAGGGTGGTTTTCATCACCA
                      ____________________________________________________________
consensus             TCAGCCATAGCCACAATTCTATCACGGAAGACCTGAGCAGGAGGGTGGTTTTCATCACCA
 
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JMSF024C06+           ACAAACTGAGTATTTGAATTAGGTATATGAAAGCTTATTTCCATCAATGAATCTTTCTCA
                      ____________________________________________________________
consensus             ACAAACTGAGTATTTGAATTAGGTATATGAAAGCTTATTTCCATCAATGAATCTTTCTCA
 
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JMSF024C06+           TTTGCTCCAGTTGTATCATCTACATGAAACTCCAACATGACATCATTTTTCCCCTGAAGC
JMFF020O22+                                                                      C
JMFF007H06+                             TCTACATGAAACTCCAACATGACATCATTTTTCCCCTGAAGC
                      ____________________________________________________________
consensus             TTTGCTCCAGTTGTATCATCTACATGAAACTCCAACATGACATCATTTTTCCCCTGAAGC
 
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JMSF024C06+           TGTGTTTGTGAGACATCAGCTAGTGATATCTCAAATGCTTGCTTAGAACCAACAAGAAAA
JMFF020O22+           TGTGTTTGTGAGACATCTGCCAGTGATATCTCAAATGCTTGCTTAGCACCAACAAGAAAT
JMFF007H06+           TGTGTTTGTGAGACATCAGCTAGTGATATCTCAAATGCTTGCTTAGAACCAACAAGAAAA
                      ____________________________________________________________
consensus             TGTGTTTGTGAGACATCAGCTAGTGATATCTCAAATGCTTGCTTAGAACCAACAAGAAAA
 
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JMSF024C06+           GTAAGCATATTCCCAGTTAGATCAACTTCTCCCCAGTTTTTTCCACTCACAGAGAGTTGC
JMFF020O22+           GTAAGCATATTCCCATTTAAATCAACTTCTCCCCAATTTTTCCCACTAATTGAGAGCTGC
JMFF007H06+           GTAAGCATATTCCCAGTTAGATCAACTTCTCCCCAGTTTTTTCCACTCACAGAGAGTTGC
                      ____________________________________________________________
consensus             GTAAGCATATTCCCAGTTAGATCAACTTCTCCCCAGTTTTTTCCACTCACAGAGAGTTGC
 
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JMSF024C06+           TTCTCCTCTGGGGTTATTCCATAAGAGTTCTGGAAAAAAGCTGTCAGACTTGAAACATCC
JMFF020O22+           TTCTCTTCTGCAATTATTCCACAAGAGCTCTGGAAAAAAGTGGTCAAACTGGAAATATCC
JMFF007H06+           TTCTCCTCTGGGGTTATTCCATAAGAGTTCTGGAAAAAAGCTGTCAGACTTGAAACATCC
                      ____________________________________________________________
consensus             TTCTCCTCTGGGGTTATTCCATAAGAGTTCTGGAAAAAAGCTGTCAGACTTGAAACATCC
 
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JMSF024C06+           TGGTCACGAAAACCAGTAAACTTATAGTAAAGACCATCCTTAATCCGAACACCAAGCTGA
JMFF020O22+           TGGTCACGGAAACCAGTAAATTTGTAGTAAAGACCATCCCTAGTTCGAACCCCAAGCTGA
JMFF007H06+           TGGTCACGAAAACCAGTAAACTTATAGTAAAGACCATCCTTAATCCGAACACCAAGCTGA
                      ____________________________________________________________
consensus             TGGTCACGAAAACCAGTAAACTTATAGTAAAGACCATCCTTAATCCGAACACCAAGCTGA
 
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JMSF024C06+           TTAGATCGAGGAACCTTCATCCAGGTAAGCCCAGCGATATCAGACTTGTCCACTTCCACC
JMFF020O22+           TTTGATCGAGGAACTTTCATCCAAGTAAGGCCCATGATTTCAGACTTGTCCACCTCTACA
JMFF007H06+           TTAGATCGAGGAACCTTCATCCAGGTAAGCCCAGCGATATCAGACTTGTCCACTTCCACC
                      ____________________________________________________________
consensus             TTAGATCGAGGAACCTTCATCCAGGTAAGCCCAGCGATATCAGACTTGTCCACTTCCACC
 
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JMSF024C06+           GCCTTACCACCACCAGCCTTCTTCCACAGAATACCCCCTGCATGAACCTTAAGTTGCCCA
JMFF020O22+           GCCTTACCTCCGCCCTGCTTCTTCCAGAGAAGACCTCCTGCATGAACCTTAAGTTGTCCT
JMFF007H06+           GCCTTACCACCACCAGCCTTCTTCCACAGAATACCCCCTGCATGAACCTTAAGTTGCCCA
                      ____________________________________________________________
consensus             GCCTTACCACCACCAGCCTTCTTCCACAGAATACCCCCTGCATGAACCTTAAGTTGCCCA
 
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JMSF024C06+           GGGTTCGTGCCTCCACGGCCACCGAGAGAGATACTGTTGAACATATGGCCGTCCGTCATG
JMFF020O22+           GAGTTAGTGCCTCCGCGGCCGCCGAGAGAGATATTGTTGAA                   
JMFF007H06+           GGGTTCGTGCCTCCACGGCCACCGAGAGAGATACTGTTGAACATATGGCCGTCCGTCATG
                      ____________________________________________________________
consensus             GGGTTCGTGCCTCCACGGCCACCGAGAGAGATACTGTTGAACATATGGCCGTCCGTCATG
 
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JMSF024C06+           GCGACTTCGAAGAAACACTGGAATTGAAGTGAAAACGGAGCTTTAAGCACAGTGCGCACT
JMFF007H06+           GCGACTTCGAAGAAACACTGGAATTGAAGTGAAAACGGAGCTTTAAGCACAGTGCGCACT
                      ____________________________________________________________
consensus             GCGACTTCGAAGAAACACTGGAATTGAAGTGAAAACGGAGCTTTAAGCACAGTGCGCACT
 
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JMSF024C06+           CTGAGGGTTTGGCGCGAAAAAGG                                     
JMFF007H06+           CTGAGGGTTTGGCGCGAAAAAGGAAAGAGATCGACTGTGAAGCCGGTCAGCCTAAGTAAA
                      ____________________________________________________________
consensus             CTGAGGGTTTGGCGCGAAAAAGGAAAGAGATCGACTGTGAAGCCGGTCAGCCTAAGTAAA
 
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JMFF007H06+           AACTCTCCAATGTAAATTGTACACTTCGGTTGTAGGGTTTACAAATTATTCCCCAAATAC
                      ____________________________________________________________
consensus             AACTCTCCAATGTAAATTGTACACTTCGGTTGTAGGGTTTACAAATTATTCCCCAAATAC