Contig 000024:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006G01Sequence466000024 (2)ref|XP_006347149.1|1e-41PREDICTED: putative PAP-specific phosphatase, mitochondrial-like isoform X1 [So710010976 (2)emb|CDO99643.1|2e-80unnamed protein product [Coffea canephora]
JMSF006P13Sequence248000024 (2)260011905 (4)emb|CAL07977.1|8e-06aquaporin [Platanus x acerifolia]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF006G01+ TCCAAGCTAACTAAAGCCTGCACTCCAAAATCTGCAACAGTCACTG
                      ____________________________________________________________
consensus TCCAAGCTAACTAAAGCCTGCACTCCAAAATCTGCAACAGTCACTG
 
. : . : . : . : . : . :
JMFF006G01+ GGGTCTGGTCATTTTTCTCAAGAATTTGTCCATCACCATCACTGGAGAGCAATGACTTCT
                      ____________________________________________________________
consensus GGGTCTGGTCATTTTTCTCAAGAATTTGTCCATCACCATCACTGGAGAGCAATGACTTCT
 
. : . : . : . : . : . :
JMFF006G01+ TAACATCAACGCAGAGACGACAAGCTCTCTCTACAACATCCACGGCTGCCTCGAGCTCTT
                      ____________________________________________________________
consensus TAACATCAACGCAGAGACGACAAGCTCTCTCTACAACATCCACGGCTGCCTCGAGCTCTT
 
. : . : . : . : . : . :
JMSF006P13+ CTCACGGTGAAGC
JMFF006G01+ TGTAGTATTTCGCTTTCTGCTCCGAAAGCGGAAGCCTCGAACTCAACCTCACGGTGAAGC
                      ____________________________________________________________
consensus TGTAGTATTTCGCTTTCTGCTCCGAAAGCGGAAGCCTCGAACTCAACCTCACGGTGAAGC
 
. : . : . : . : . : . :
JMSF006P13+ AGCGCCGGCGGGGAGGCTGATCGAACGGACGGCATGGATGAGCTTTGGGGAATCGAACGG
JMFF006G01+ AGCGCCGGCGGGGAGGCTGATCGAACGGACGGCATGGATGAGCTTTGGGGAATCGAACGG
                      ____________________________________________________________
consensus AGCGCCGGCGGGGAGGCTGATCGAACGGACGGCATGGATGAGCTTTGGGGAATCGAACGG
 
. : . : . : . : . : . :
JMSF006P13+ CGGAGTAGCGGAGAAGATCCATTGCAGGAGAGAATCAAACGGTAAAGGAAGCTGCGAATG
JMFF006G01+ CGGAGTAGCGGAGAAGATCCATTGCAGGAGAGAATCAAACGGTAAAGGAAGCTGCTAATG
                      ____________________________________________________________
consensus CGGAGTAGCGGAGAAGATCCATTGCAGGAGAGAATCAAACGGTAAAGGAAGCTGCTAATG
 
. : . : . : . : . : . :
JMSF006P13+ GAATATGCTATATTTAATGTTTAATGTTCATTATATGATGAGAAACGCCGACTCCTAACG
JMFF006G01+ GAATATGCTATATTTAATGTTTAATGTTCATTATATGATGAGAAACGCCGACTCCTAACG
                      ____________________________________________________________
consensus GAATATGCTATATTTAATGTTTAATGTTCATTATATGATGAGAAACGCCGACTCCTAACG
 
. : . : . : . : . : . :
JMSF006P13+ GCGAAGAGTATAATGGCGGCCTGCGGGGATAGATTGAGCAGCCCGGTGACAGTT
JMFF006G01+ GCGAAGAGTATAACGGCGGCCTGCGGGGATAGATTGAGCAGCCCGGTGACAGTTGAGTCC
                      ____________________________________________________________
consensus GCGAAGAGTATAATGGCGGCCTGCGGGGATAGATTGAGCAGCCCGGTGACAGTTGAGTCC