| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004N06 | Sequence | 641 | 000017 (7) | ref|XP_002276017.1| | 179 | PREDICTED: uncharacterized protein LOC100257238 [Vitis vinifera] emb|CBI37912.3| | 707 | 000017 (7) | ref|XP_009610662.1| | 224 | PREDICTED: uncharacterized protein LOC104104317 [Nicotiana tomentosiformis] |
| JMFF031F10 | Sequence | 606 | 000017 (7) | ref|XP_002276017.1| | 179 | PREDICTED: uncharacterized protein LOC100257238 [Vitis vinifera] emb|CBI37912.3| | 699 | 000017 (7) | ref|XP_009610662.1| | 224 | PREDICTED: uncharacterized protein LOC104104317 [Nicotiana tomentosiformis] |
| JMFN005F05 | Sequence | 549 | 000017 (7) | ref|XP_009610662.1| | 119 | PREDICTED: uncharacterized protein LOC104104317 [Nicotiana tomentosiformis] | |||||
| JMSF011B07 | Sequence | 203 | 000017 (7) | ref|XP_009781678.1| | 84.3 | PREDICTED: uncharacterized protein LOC104230542 [Nicotiana sylvestris] | 715 | 000017 (7) | ref|XP_009610662.1| | 224 | PREDICTED: uncharacterized protein LOC104104317 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFN005F05+ GTG
____________________________________________________________
consensus GTG
. : . : . : . : . : . :
JMFN005F05+ GTGAACAATTATTATGATTAGTAATGAACATTAGTTTATAAAAAACTGTTTGCCATCTAA
____________________________________________________________
consensus GTGAACAATTATTATGATTAGTAATGAACATTAGTTTATAAAAAACTGTTTGCCATCTAA
. : . : . : . : . : . :
JMFN005F05+ TCTCCATTTAATAACAAAAGGGAAATAAGTACTTCATTGTAACATGAATCACGGACAAAT
rJMSF011B07- CTTCATTGTAACATGAATCACGGACAAAT
rJMFF004N06- CTTCATTGTAACATGAATCACGGACAAAT
rJMFF031F10- TTGTAACATGAATCACGGACAAAT
____________________________________________________________
consensus TCTCCATTTAATAACAAAAGGGAAATAAGTACTTCATTGTAACATGAATCACGGACAAAT
. : . : . : . : . : . :
JMFN005F05+ TAAAGGTGATGATACAGGAATACTAACCATATATCATTATCAGTAAAAGGACCTGACAGA
rJMSF011B07- TAAAGGTGATGATACAGGAATACTAACCATATATCATTATCAGTAAAAGGACCTGACAGA
rJMFF004N06- TAAAGGTGATGATACAGGAATACTAACCATATATCATTATCAGTAAAAGGACCTGACAGA
rJMFF031F10- TAAAGGTGATGATACAGGAATACTAACCATATATCATTATCAGTAAAAGGACCTGACAGA
____________________________________________________________
consensus TAAAGGTGATGATACAGGAATACTAACCATATATCATTATCAGTAAAAGGACCTGACAGA
. : . : . : . : . : . :
JMFN005F05+ AATGCGTATTTTGGTCCATACACAACAATAACCATAACAAATATATATTGAGTATTAGTA
rJMSF011B07- AATGCGTATTTTGGTCCATACACAACAATAACCATAACAAATATATATTGAGTATTAGTA
rJMFF004N06- AATGCGTATTTTGGTCCATACACAACAATAACCATAACAAATATATATTGAGTATTAGTA
rJMFF031F10- AATGCGTATTTTGGTCCATACACAACAATAACCATAACAAATATATATTGAGTATTAGTA
____________________________________________________________
consensus AATGCGTATTTTGGTCCATACACAACAATAACCATAACAAATATATATTGAGTATTAGTA
. : . : . : . : . : . :
JMFN005F05+ TAACCCAACATTACAAGCCATCCATAAACCCAAAAATTGACTGTATAGTAGAATACACGT
rJMSF011B07- TAACCCAACATTACAAGCCATCCATAAACCCAGAAATTGACTGTATAGTAGAATACACGT
rJMFF004N06- TAACCCAACATTACAAGCCATCCATAAACCCAGAAATTGACTGTATAGTAGAATACACGT
rJMFF031F10- TAACCCAACATTACAAGCCATCCATAAACCCAGAAATTGACTGTATAGTAGAATACACGT
____________________________________________________________
consensus TAACCCAACATTACAAGCCATCCATAAACCCAGAAATTGACTGTATAGTAGAATACACGT
. : . : . : . : . : . :
JMFN005F05+ ACTATATAAATCAAGAATTTGTGGTGCAAGGAGTGAATCTGCAGGTAGAAGTAGGCAGAG
rJMSF011B07- ACTATATAAATCAAGAATTTGTGGTGCAAGGAGTGAATCTGCAGGTAGAAGTAGGCAGAG
rJMFF004N06- ACTATATAAATCAAGAATTTGTGGTGCAAGGAGTGAATCTGCAGGTAGAAGTAGGCAGAG
rJMFF031F10- ACTATATAAATCAAGAATTTGTGGTGCAAGGAGTGAATCTGCAGGTAGAAGTAGGCAGAG
____________________________________________________________
consensus ACTATATAAATCAAGAATTTGTGGTGCAAGGAGTGAATCTGCAGGTAGAAGTAGGCAGAG
. : . : . : . : . : . :
JMFN005F05+ AGATTCCAGAGTTTGCTCTCATGAAACTGAGAGCAGTGTGGAGGACTTGCTGTGTAGATC
rJMSF011B07- AGATTCCAGAGTTTGCTCTCATGAAACTGAGAGCAGTGTGGAGGACTTGCTGTGTAGATC
rJMFF004N06- AGATTCCAGAGTTTGCTCTCATGAAACTGAGAGCAGTGTGGAGGACTTGCTGTGTAGATC
rJMFF031F10- AGATTCCAGAGTTTGCTCTCATGAAACTGAGAGCAGTGTGGAGGACTTGCTGTGTAGATC
____________________________________________________________
consensus AGATTCCAGAGTTTGCTCTCATGAAACTGAGAGCAGTGTGGAGGACTTGCTGTGTAGATC
. : . : . : . : . : . :
JMFN005F05+ CCATCAATGCCCAATTCATTCGTTCGACGACTCCCAGAGGGTGGAATGGGAACAGTAAGG
rJMSF011B07- CCATCAATGCCCAATTCATTCGTTCGACGACTCCCAGAGGGTGGAATGGGAACAGTAAGG
rJMFF004N06- CCATCAATGCCCAATTCATTCGTTCGACGACTCCCAGAGGGTGGAATGGGAACAGTAAGG
rJMFF031F10- CCATCAATGCCCAATTCATTCGTTCGACGACTCCCAGAGGGTGGAATGGGAACAGTAAGG
____________________________________________________________
consensus CCATCAATGCCCAATTCATTCGTTCGACGACTCCCAGAGGGTGGAATGGGAACAGTAAGG
. : . : . : . : . : . :
JMFN005F05+ TAGTATATGAGTTGAGAAGGGCTGTTGTTCCTTCCCTTAGCAGTGTCCTGTAGGGCTCCC
rJMSF011B07- TAGTATATGAGTTGAGAAGGGCTGTTGTTCCTTCCCTTAGCAGTGTCCTGTAGGGCTCCC
rJMFF004N06- TAGTATATGAGTTGAGAAGGGCTGTTGTTCCTTCCCTTAGCAGTGTCCTGTAGGGCTCCC
rJMFF031F10- TAGTATATGAGTTGAGAAGGGCTGTTGTTCCTTCCCTTAGCAGTGTCCTGTAGGGCTCCC
____________________________________________________________
consensus TAGTATATGAGTTGAGAAGGGCTGTTGTTCCTTCCCTTAGCAGTGTCCTGTAGGGCTCCC
. : . : . : . : . : . :
JMFN005F05+ CTCTTC
rJMSF011B07- CTCTTCCCTTCATCCCTTCCCAAAGTGTCATGTCTGTTCCATATTTCCGGGCCGCCAGCA
rJMFF004N06- CTCTTCCCTTCATCCCTTCCCAAAGTGTCATGTCTGTTCCATATTTCCGGGCCGCCAGCA
rJMFF031F10- CTCTTCCCTTCATCCCTTCCCAAAGTGTCATGTCTGTTCCATATTTCCGGGCCGCCAGCA
____________________________________________________________
consensus CTCTTCCCTTCATCCCTTCCCAAAGTGTCATGTCTGTTCCATATTTCCGGGCCGCCAGCA
. : . : . : . : . : . :
rJMSF011B07- GCCCGAAAACAACCCCCACTTTTGCATCAGGACTCACAACCTTCCAATAGCATCTGTATT
rJMFF004N06- GCCCGAAAACAACCCCCACTTTTGCATCAGGACTCACAACCTTCCAATAGCATCTGTATT
rJMFF031F10- GCCCGAAAACAACCCCCACTTTTGCATCAGGACTCACAACCTTCCAATAGCATCTGTATT
____________________________________________________________
consensus GCCCGAAAACAACCCCCACTTTTGCATCAGGACTCACAACCTTCCAATAGCATCTGTATT
. : . : . : . : . : . :
rJMSF011B07- CTGGCATTATCCATTTCTGGTATGGGCAGGCTGAAGCTTCTAGAAATGGGGATGGAGGCA
rJMFF004N06- CTGGCATTATCCATTTCTGGTATGGGCAGGCTGAAGCTTCTAGAAATGGGGATGGAGGCA
rJMFF031F10- CTGGCATTATCCATTTCTGGTATGGGCAGGCTGAAGCTTCTAGAAATGGGGATGGAGGCA
JMFF031F10+ TCTAGAAATGGGGATGGAGGCA
JMFF004N06+ GTATGGGCAGGCTGAAGCTTCTAGAAATGGGGATGGAGGCA
____________________________________________________________
consensus CTGGCATTATCCATTTCTGGTATGGGCAGGCTGAAGCTTCTAGAAATGGGGATGGAGGCA
. : . : . : . : . : . :
rJMSF011B07- TTGGGGGTAAGCTTGGCAATGGCGGCAGTGCAGGCGTTACAGGCGGCGAAGGAGTGACTG
rJMFF004N06- TTGGGGGTAAGCTTGGCAATGGCGGCAGTGCAGGCGTTACAGGCGGCGAAGGAGTGACTG
rJMFF031F10- TTGGGGGTAAGCTTGGCAATGGCGGCAGTGCAGGCGTTACAGGCGGCGAAGGAGTGACTG
JMFF031F10+ TTGGGGGTAAGCTTGGCAATGGCGGCAGTGCAGGCGTTACAGGCGGCGAAGGAGTGACTG
JMFF004N06+ TTGGGGGTAAGCTTGGCAATGGCGGCAGTGCAGGCGTTACAGGCGGCGAAGGAGTGACTG
____________________________________________________________
consensus TTGGGGGTAAGCTTGGCAATGGCGGCAGTGCAGGCGTTACAGGCGGCGAAGGAGTGACTG
. : . : . : . : . : . :
rJMSF011B07- GTGCGG
rJMFF004N06- GTGCGGGCACGGA
rJMFF031F10- GTGCGGGCACGGA
JMFF031F10+ GTGCGGGCACGGAAGAAGATGGGCAGAAGGACATAGGCTGAGCAGGCTGAGAAATCAGAG
JMFF004N06+ GTGCGGGCACGGAAGAAGATGGGCAGAAGGACATAGGCTGAGCAGGCTGAGAAATCAGAG
____________________________________________________________
consensus GTGCGGGCACGGAAGAAGATGGGCAGAAGGACATAGGCTGAGCAGGCTGAGAAATCAGAG
. : . : . : . : . : . :
JMFF031F10+ CATCCACTGCATACATTTCCATATCAAACATCCTGAACATTAGCTTTAGAGGCTTGGGTG
JMFF004N06+ CATCCACTGCATACATTTCCATATCAAACATCCTGAACATTAGCTTTAGAGGCTTGGGTG
____________________________________________________________
consensus CATCCACTGCATACATTTCCATATCAAACATCCTGAACATTAGCTTTAGAGGCTTGGGTG
. : . : . : . : . : . :
JMFF031F10+ GACCGCCGGCTGCCCCGCAGGTTGCCGACGGTTGGCTACTGCCGGAAACCTGCGCAAAAC
JMFF004N06+ GACCGCCGGCTGCCCCGCAGGTTGCCGACGGTTGGCTACTGCCGGAAACCTGCGCAAAAC
____________________________________________________________
consensus GACCGCCGGCTGCCCCGCAGGTTGCCGACGGTTGGCTACTGCCGGAAACCTGCGCAAAAC
. : . : . : . : . : . :
JMFF031F10+ AGTTGCTCAAATCTTGGGTGCTGTCAAATCTCATGTTGAAACCTCCTAACCAATTCGTAC
JMFF004N06+ AGTTGCTCAAATCTTGGGTGCTGTCAAATCTCATGTTGAAACCTCCTAACCAATTCGTAC
____________________________________________________________
consensus AGTTGCTCAAATCTTGGGTGCTGTCAAATCTCATGTTGAAACCTCCTAACCAATTCGTAC
. : . : . : . : . : . :
JMFF031F10+ TTTCCTCTCCCCGTGTTGTCATTTGCCCGTTCCCGTCTGGGCATGCCATTGCCACTTTTA
JMSF011B07+ TTGTCATTTGCCCGTTCCCGTCTGGGCATGCCATTGCCACTTTTA
JMFF004N06+ TTTCCTCTCCCCGTGTTGTCATTTGCCCGTTCCCGTCTGGGCATGCCATTGCCACTTTTA
____________________________________________________________
consensus TTTCCTCTCCCCGTGTTGTCATTTGCCCGTTCCCGTCTGGGCATGCCATTGCCACTTTTA
. : . : . : . : . : . :
JMFF031F10+ TTCCGTATACTGGATAATCAAAAAGGGAAACTTTGCCATCTTTACACTGATCACAGAACA
JMSF011B07+ TTCCGTATACTGGATAATCAAAAAGGGAAACTTTGCCATCTTTACACTGATCACAGAACA
JMFF004N06+ TTCCGTATACTGGATAATCAAAAAGGGAAACTTTGCCATCTTTACACTGATCACAGAACA
____________________________________________________________
consensus TTCCGTATACTGGATAATCAAAAAGGGAAACTTTGCCATCTTTACACTGATCACAGAACA
. : . : . : . : . : . :
JMFF031F10+ CAGTGCCGGAGATAATGGTTAGCCCATGAGTTGTACCAATGGCAGCGGCTGCAGTCAGAA
JMSF011B07+ CAGTGCCGGAGATAATGGTTAGCCCATGAGTTGTACCAATGGCAGCGGCTGCAGTCAGAA
JMFF004N06+ CAGTGCCGGAGATAATGGTTAGCCCATGAGTTGTACCAATGGCAGCGGCTGCAGTCAGAA
____________________________________________________________
consensus CAGTGCCGGAGATAATGGTTAGCCCATGAGTTGTACCAATGGCAGCGGCTGCAGTCAGAA
. : . : . : . : . : . :
JMFF031F10+ AAGCAGCGAACCAAAGCTTGAAGAACCAATCCATGGCGGATAAGATGATGGTGCAGAATC
JMSF011B07+ AAGCAGCGAACCAAAGCTTGAAGAACCAATCCATGGC
JMFF004N06+ AAGCAGCGAACCAAAGCTTGAAGAACCAATCCATGGCGGATAAGATGATGGTGCAGAATC
____________________________________________________________
consensus AAGCAGCGAACCAAAGCTTGAAGAACCAATCCATGGCGGATAAGATGATGGTGCAGAATC
. : . : . : . : . : . :
JMFF031F10+ AGGGGATTTAAATTTAATAAAGCAGCAGGAATGGCAGAAGCTGT
JMFF004N06+ AGGGGATTTAAATTTAATAAAGCAGCAGGAATGGCAGAAGCTGTAAAGGAGGAGCGATGA
____________________________________________________________
consensus AGGGGATTTAAATTTAATAAAGCAGCAGGAATGGCAGAAGCTGTAAAGGAGGAGCGATGA