Contig 000012:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003P03Sequence557000012 (4)emb|CDP11435.1|4e-26unnamed protein product [Coffea canephora]754011135 (3)ref|XP_009787722.1|199PREDICTED: uncharacterized protein LOC104235617 [Nicotiana sylvestris] ref|XP_00
JMFF023G03Sequence450000012 (4)ref|XP_003634525.1|6e-10PREDICTED: uncharacterized protein LOC100854917 isoform X1 [Vitis vinifera] emb750011135 (3)ref|XP_009787722.1|199PREDICTED: uncharacterized protein LOC104235617 [Nicotiana sylvestris] ref|XP_00
JMFF040C02Sequence498000012 (4)emb|CDP11435.1|3e-30unnamed protein product [Coffea canephora]754011135 (3)ref|XP_009787722.1|153PREDICTED: uncharacterized protein LOC104235617 [Nicotiana sylvestris] ref|XP_00
JMFF044N09Sequence629000012 (4)ref|XP_009787722.1|140PREDICTED: uncharacterized protein LOC104235617 [Nicotiana sylvestris] ref|XP_00616022389ref|XP_009787722.1|81.3PREDICTED: uncharacterized protein LOC104235617 [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


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JMFF044N09+               ATGCCTCATATTCATCAGTACTTTCACCAGAAACTGCTATGCTATTTGCAGCTTTC
                      ____________________________________________________________
consensus                 ATGCCTCATATTCATCAGTACTTTCACCAGAAACTGCTATGCTATTTGCAGCTTTC
 
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JMFF044N09+           TNTAAGCAACTTTTAAGGGCACCCTCAACAGAGGTATTGCCATCTTTCACAAGACTAGCA
                      ____________________________________________________________
consensus             TNTAAGCAACTTTTAAGGGCACCCTCAACAGAGGTATTGCCATCTTTCACAAGACTAGCA
 
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JMFF044N09+           GAATTAATTTCATCATTTCCCTTCCCAGAAGGAGAACAGATTGATTGTGAGACTTCTTGG
                      ____________________________________________________________
consensus             GAATTAATTTCATCATTTCCCTTCCCAGAAGGAGAACAGATTGATTGTGAGACTTCTTGG
 
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JMFF044N09+           TGCTGAGTAGAATCAACCTTAAGGGGAGATGGGTTATCAAGTTCAGCGGCGGCACCACCA
JMFF040C02+               GAGTAGGACCAACCTTAAGCGGAGATGGGCTCTCGAGTCCAGCGGCAGCACGACCA
JMFF003P03+                                  GGGAGATGGGCTCTCGAGTCCAGCGGCAGCACGACCA
                      ____________________________________________________________
consensus             TGCTGAGTAGGATCAACCTTAAGGGGAGATGGGCTCTCGAGTCCAGCGGCAGCACGACCA
 
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JMFF044N09+           AAACAGACTAAGGAAGCGCAACCGCTAACAAGCCTATTCTTGCAGGAAGCCAGTTGAAGA
JMFF040C02+           AAGCAGACAAAGGAAGCGCACCCACGGACAAGCCTGCTCTTCCTGGAAGCCAGTTCAGGA
JMFF023G03+                                                       GGAAGCCAGTTCAGGA
JMFF003P03+           AAGCAGACAAAGGAAGCGCACCCACGGACAAGCCTGCTCTTCCTGGAAGCCAGTTCAGGA
                      ____________________________________________________________
consensus             AAGCAGACAAAGGAAGCGCACCCACGGACAAGCCTGCTCTTCCTGGAAGCCAGTTCAGGA
 
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JMFF044N09+           TCAGACTCAGTTTCTTGATCCACCAACTGGTACTGGTTCCACGGCGTAACTTTCATTGGC
JMFF040C02+           TCAGTATCAGTTTCTTGGTTCACCAATTGGTAATGGCTCCAAGGCGTAACTCTCATGGGC
JMFF023G03+           TCAGTATCAGTTTCTTGGTTCACCAATTGGTAATGGCTCCAAGGCGTAACTCTCATGGGC
JMFF003P03+           TCAGTATCAGTTTCTTGGTTCACCAATTGGTAATGGCTCCAAGGCGTAACTCTCATGGGC
                      ____________________________________________________________
consensus             TCAGTATCAGTTTCTTGGTTCACCAATTGGTAATGGCTCCAAGGCGTAACTCTCATGGGC
 
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JMFF044N09+           TTTTCTTCATTTTTCTGACCCAAAAGAAGAAGAGCAAGGCCTTTGCTATACCCAGAAGCT
JMFF040C02+           TTCTCTTCGTTCTTCTGACCCAAGAGAAGAAGGGACAGGCCCTTGCTATACCCAGAAGCT
JMFF023G03+           TTCTCTTCGTTCTTCTGACCCAAGAGAAGAAGGGACAGGCCCTTGCTATACCCAGAAGCT
JMFF003P03+           TTCTCTTCGTTCTTCTGACCCNAGAGAAGAAGGGACAGGCCCTTGCTATACCCAGAAGCT
                      ____________________________________________________________
consensus             TTCTCTTCGTTCTTCTGACCCAAGAGAAGAAGGGACAGGCCCTTGCTATACCCAGAAGCT
 
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JMFF044N09+           GAAGAAGAGAAGAAACCTCCTCCTTTTACTGCCAATAACATCAGTTCT            
JMFF040C02+           GAAGAAGAGAAGAAACCCCCACCTTCTACTGCCAATAACATCAGTTCTTCTCATCTGGTC
JMFF023G03+           GAAGAAGAGAAGAAACCCCCACCTTCTACTGCCAATAACATCAGTTCTTCTCATCTGGTC
JMFF003P03+           GAAGAAGAGAAGAAACCCCCACCTTCTACTGCCAATAACATCAGTTCTTCTCATCTGGTC
                      ____________________________________________________________
consensus             GAAGAAGAGAAGAAACCCCCACCTTCTACTGCCAATAACATCAGTTCTTCTCATCTGGTC
 
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JMFF040C02+           ACCATCCAAAACTGTTTGTACAATAACCCTCACCCCCCAAAAATAGGTGCCCACTTTTTG
JMFF023G03+           ACCATCCAAAACTGTTTGTACAATAACCCTCACCCCCCAAAAATAGGTGCCCACTTTTTG
JMFF003P03+           ACCATCCAAAACTGTTTGTACAATAACCCTCACCCCCCAAAAATAGGTGCCCACTTTTTG
                      ____________________________________________________________
consensus             ACCATCCAAAACTGTTTGTACAATAACCCTCACCCCCCAAAAATAGGTGCCCACTTTTTG
 
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JMFF040C02+           CTAGTAGTGCTCCCAACAGGACAGTCAAAAAGAATGCAGATCTGAGTTGAAGAAATGCCC
JMFF023G03+           CTAGTAGTGCTCCCAACAGGACAGTCAAAAAGAATGCAGATCTGAGTTGAAGAAATGCCC
JMFF003P03+           CTAGTAGTGCTCCCAACAGGACAGTCAAAAAGAATGCAGATCTGAGTTGAAGAAATGCCC
                      ____________________________________________________________
consensus             CTAGTAGTGCTCCCAACAGGACAGTCAAAAAGAATGCAGATCTGAGTTGAAGAAATGCCC
 
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JMFF040C02+           CGCGCGACTTCACCGGACCGACGGCTCCATCTCCGATTACTCGAAACCGTACAGAATACA
JMFF023G03+           CGCGCGACTTCACCGGACCGACGGCTCCATCTCCGATTACTCGAAACCGTACAGAATACA
JMFF003P03+           CGCGCGACTTCACCGGACCGACGGCTCCATCTCCGATTACTCGAAACCGTACAGAATACA
                      ____________________________________________________________
consensus             CGCGCGACTTCACCGGACCGACGGCTCCATCTCCGATTACTCGAAACCGTACAGAATACA
 
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JMFF040C02+           CCGAGGCGTAGACTATAGATAC                                      
JMFF023G03+           CCGAGGCGTAGACTATAGATACAGTATATATGCGTATCAGACTATCAGTGTATGAATATT
JMFF003P03+           CCGAGGCGTAGACTATAGATACAGTATATATGCGTATCAGACTATCAGTGTATGAATATT
                      ____________________________________________________________
consensus             CCGAGGCGTAGACTATAGATACAGTATATATGCGTATCAGACTATCAGTGTATGAATATT