Contig 000010:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002P18Sequence465000010 (3)ref|XP_006366773.1|3e-48PREDICTED: endoplasmic oxidoreductin-1-like [Solanum tuberosum]337005775 (3)
JMFF016M11Sequence567000010 (3)ref|XP_006366773.1|4e-55PREDICTED: endoplasmic oxidoreductin-1-like [Solanum tuberosum]768006827 (4)gb|KDO53447.1|4e-79hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]
JMFF036L21Sequence568000010 (3)ref|XP_006366773.1|4e-55PREDICTED: endoplasmic oxidoreductin-1-like [Solanum tuberosum]292005775 (3)

Alignment

This contig is upended


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JMFF036L21+                                              TAATGTGCGGTCAACTGCAGCCTGT
JMFF016M11+                                            TCTAATGTGCGGTCAACTGCAGCCTGT
                      ____________________________________________________________
consensus                                              TCTAATGTGCGGTCAACTGCAGCCTGT
 
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JMFF036L21+           GGCTTTCCCTCCTGGCAAATAGGATCATCAGATCCAAGACCATGTAGCAGAGGCCTCTTA
JMFF016M11+           GGCTTTCCCTCCTGGCAAATAGGATCATCAGATCCAAGACCATGTAGCAGAGGCCTCTTA
                      ____________________________________________________________
consensus             GGCTTTCCCTCCTGGCAAATAGGATCATCAGATCCAAGACCATGTAGCAGAGGCCTCTTA
 
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JMFF036L21+           AAAGGTTCTGGGAATTCATTTTCCGGACATTCACACACGCTACAGTCACGCAACTTACAC
JMFF016M11+           AAAGGTTCTGGGAATTCATTTTCCGGACATTCACACACGCTACAGTCACGCAACTTACAC
JMFF002P18+                          TCATTTTCCGGACATTCACACACGNTACAGTCACGCAACTTACAC
                      ____________________________________________________________
consensus             AAAGGTTCTGGGAATTCATTTTCCGGACATTCACACACGCTACAGTCACGCAACTTACAC
 
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JMFF036L21+           ATACCATCGTCTGGCCAAAAAGGGCAGTCACACCATAACTTCACCTTAAAGTATCGGAAG
JMFF016M11+           ATACCATCGTCTGGCCAAAAAGGGCAGTCACACCATAACTTCACCTTAAAGTATCGGAAG
JMFF002P18+           ATACCATCGTNTGGCCAAAAAGGGCAGTCACACCATAACTTCACCTTAAAGTATCGGAAG
                      ____________________________________________________________
consensus             ATACCATCGTCTGGCCAAAAAGGGCAGTCACACCATAACTTCACCTTAAAGTATCGGAAG
 
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JMFF036L21+           AATGGAGTTGTAACAAGCTCTTGGAGTAAAGGATGCAGTACAGCTGCATTAAGAGTGTCA
JMFF016M11+           AATGGAGTTGTAACAAGCTCTTGGAGTAAAGGATGCAGTACAGCTGCATTAAGAGTGTCA
JMFF002P18+           AATGGAGTTGTAACAAGCTCTTGGAGTAAAGGATGCAGTACAGCTGCATTAAGAGTGTCA
                      ____________________________________________________________
consensus             AATGGAGTTGTAACAAGCTCTTGGAGTAAAGGATGCAGTACAGCTGCATTAAGAGTGTCA
 
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JMFF036L21+           ACTGTTTCATAATCACAGCAGCAGTCCTCAACAATTCCAGTATATTTTCGAGAATCCTGA
JMFF016M11+           ACTGTTTCATAATCACAGCAGCAGTCCTCAACAATTCCAGTATATTTTCGAGAATCCTGA
JMFF002P18+           ACTGTTTCATAATCACAGCAGCAGTCCTCAACAATTCCAGTATATTTTCGAGAATCCTGA
                      ____________________________________________________________
consensus             ACTGTTTCATAATCACAGCAGCAGTCCTCAACAATTCCAGTATATTTTCGAGAATCCTGA
 
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JMFF036L21+           GCACAGGGACAAGATTTGAAATTCTGTGCAGGAAAAAACCCTACTGCTAATGCTATCACC
JMFF016M11+           GCACAGGGACAAGATTTGAAATTCTGTGCAGGAAAAAACCCTACTGCTAATGCTATCACC
JMFF002P18+           GCACAGGGACAAGATTTGAAATTCTGTGCAGGAAAAAACCCTACTGCTAATGCTATCACC
                      ____________________________________________________________
consensus             GCACAGGGACAAGATTTGAAATTCTGTGCAGGAAAAAACCCTACTGCTAATGCTATCACC
 
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JMFF036L21+           ACCCCCATCTTCTTCCTTTCTTCTTCTTACTCTTCTCTCTCCCTTTCCTCTCTTCGACCT
JMFF016M11+           ACCCCCATCTTCTTCCTTTCTTCTTCTTACTCTTCTCTCTCCCTTTCCTCTCTTCGACCT
JMFF002P18+           ACCCCCATCTTCTTCCTTTCTTCTTCTTACTCTTCTCTCTCCCTTTCCTCTCTTCGACCT
                      ____________________________________________________________
consensus             ACCCCCATCTTCTTCCTTTCTTCTTCTTACTCTTCTCTCTCCCTTTCCTCTCTTCGACCT
 
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JMFF036L21+           CAGCTTCCACCATTTCGCCTATACATACATTGATCTGTATCTACACCTGTATTAATATGT
JMFF016M11+           CAGCTTCCACCATTTCGCCTATACATACATTGATCTGTATCTACACCTGTATTAATATGT
JMFF002P18+           CAGCTTCCACCATTTCGCCTATACATACATTGATCTGTATCTACACCTGTATTAATATGT
                      ____________________________________________________________
consensus             CAGCTTCCACCATTTCGCCTATACATACATTGATCTGTATCTACACCTGTATTAATATGT
 
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JMFF036L21+           ACACAGAAAAATAAGAATTCCTAATCTCAGCTTTATGCCGTCCCTGGGTTTGGCAAACAC
JMFF016M11+           ACACAGAAAAATAAGAATTCCTAATCTCAGCTTTATGCCGTCCCTGGGTTTGGCAAACAC
JMFF002P18+           ACACAGAAAAATAAGAATTCCTAATCTCAGCTTTATGCCGTCCCTGGGTTTGGCAAACAC
                      ____________________________________________________________
consensus             ACACAGAAAAATAAGAATTCCTAATCTCAGCTTTATGCCGTCCCTGGGTTTGGCAAACAC