Contig 000006:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001M21Sequence513000006 (3)ref|XP_009773400.1|3e-26PREDICTED: pectinesterase 1 [Nicotiana sylvestris]603003365 (5)ref|XP_011079312.1|8e-85PREDICTED: pectinesterase 1-like [Sesamum indicum]
JMFF032J14Sequence526000006 (3)ref|XP_009773400.1|7e-27PREDICTED: pectinesterase 1 [Nicotiana sylvestris]686003365 (5)ref|XP_011079312.1|3e-102PREDICTED: pectinesterase 1-like [Sesamum indicum]
JMFF033J09Sequence511000006 (3)ref|XP_009773400.1|7e-27PREDICTED: pectinesterase 1 [Nicotiana sylvestris]643003365 (5)ref|XP_011079312.1|7e-95PREDICTED: pectinesterase 1-like [Sesamum indicum]

Alignment

This contig is upended


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JMFF001M21+                                      TCCTCCATCCCGCCGGCTGCGAGGCCAGCTTCT
                      ____________________________________________________________
consensus                                        TCCTCCATCCCGCCGGCTGCGAGGCCAGCTTCT
 
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JMFF001M21+           TCAACGAATCAACCGCCAGTTGCAGAGAAAGCACGAAGAGCTTTTTAGGGTCGGTGGTTT
                      ____________________________________________________________
consensus             TCAACGAATCAACCGCCAGTTGCAGAGAAAGCACGAAGAGCTTTTTAGGGTCGGTGGTTT
 
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JMFF001M21+           TTTCGCCGGCAACCTGCGACAGACTCGAAACGCACGAATCTTTGTACTCTGTCACGCTGC
                      ____________________________________________________________
consensus             TTTCGCCGGCAACCTGCGACAGACTCGAAACGCACGAATCTTTGTACTCTGTCACGCTGC
 
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JMFF001M21+           AGATCGCCTGGACGGATTTCGAAGTGCTGCGAGTGGCATCGCCGCCTTCGCCGGAGCCGG
                      ____________________________________________________________
consensus             AGATCGCCTGGACGGATTTCGAAGTGCTGCGAGTGGCATCGCCGCCTTCGCCGGAGCCGG
 
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JMFF032J14+                    TCTTGTTCTTCTTGTGAATGACCGTTCCGGCGACTATTCCGATGACCAGAC
JMFF033J09+                    TCTTGTTCTTCTTGTGAATGACCGTTCCGGCGACTATTCCGATGACCAGAC
JMFF001M21+           AGCCTTCATTCTTGTTCTTCTTGTGAATGACCGTTCCGGCGACTATTCCGATGACCAGAC
                      ____________________________________________________________
consensus             AGCCTTCATTCTTGTTCTTCTTGTGAATGACCGTTCCGGCGACTATTCCGATGACCAGAC
 
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JMFF032J14+           CGACGAGAAGCACCGCCGAAACGGCGAGAATGATTATACGCTTGCGGGTCTTCCGCCGGA
JMFF033J09+           CGACGAGAAGCACCGCCGAAACGGCGAGAATGATTATACGCTTGCGGGTCTTCCGCCGGA
JMFF001M21+           CGACGAGAAGCACCGCCGAAACGGCGAGAATGATTATACGCTTGCGGGTCTTCCGCCGGA
                      ____________________________________________________________
consensus             CGACGAGAAGCACCGCCGAAACGGCGAGAATGATTATACGCTTGCGGGTCTTCCGCCGGA
 
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JMFF032J14+           AAGCTTGTTCCGCGGCCGGATCCACCTTCCCATAGCCCTTGAAGGAGTTTATTGTATCCA
JMFF033J09+           AAGCTTGTTCCGCGGCCGGATCCACCTTCCCATAGCCCTTGAAGGAGTTTATTGTATCCA
JMFF001M21+           AAGCTTGTTCCGCGGCCGGATCCACCTTCCCATAGCCCTTGAAGGAGTTTATTGTATCCA
                      ____________________________________________________________
consensus             AAGCTTGTTCCGCGGCCGGATCCACCTTCCCATAGCCCTTGAAGGAGTTTATTGTATCCA
 
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JMFF032J14+           TAACTGGAACTGAAGCTCAGAGCTGAGCAATTTCAATGGCGGAATCCCGTAGATTTACGT
JMFF033J09+           TAACTGGAACTGAAGCTCAGAGCTGAGCAATTTCAATGGCGGAATCCCGTAGATTTACGT
JMFF001M21+           TAACTGGAACTGAAGCTCAGAGCTGAGCAATTTCAATGGCGGAATCCCGTAGATTTACGT
                      ____________________________________________________________
consensus             TAACTGGAACTGAAGCTCAGAGCTGAGCAATTTCAATGGCGGAATCCCGTAGATTTACGT
 
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JMFF032J14+           GTTTTTTGGAGGTTTTTGAACTCCGATGAGATTGCGTTGTATAATAATATAATGTTTTGT
JMFF033J09+           GTTTTTTGGAGGTTTTTGAACTCCGATGAGATTGCGTTGTATAATAATAT          
JMFF001M21+           GTTTTTTGGAGGTTTTTGAACTCCGATGAGATTGCGTTGTATAATAATATAATGTTTTGT
                      ____________________________________________________________
consensus             GTTTTTTGGAGGTTTTTGAACTCCGATGAGATTGCGTTGTATAATAATATAATGTTTTGT