Contig 000004:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001L07Sequence541000004 (10)
JMFF002J16Sequence474000004 (10)689006770 (4)ref|XP_011089810.1|2e-69PREDICTED: U-box domain-containing protein 13 [Sesamum indicum]
JMFF009L22Sequence571000004 (10)
JMFF024L16Sequence456000004 (10)ref|XP_008355146.1|2e-16PREDICTED: U-box domain-containing protein 13-like [Malus domestica]677006770 (4)ref|XP_011089810.1|1e-69PREDICTED: U-box domain-containing protein 13 [Sesamum indicum]
JMFF033C12Sequence540000004 (10)637009727 (6)ref|XP_009782827.1|212PREDICTED: uncharacterized protein LOC104231512 [Nicotiana sylvestris]
JMFF036E12Sequence557000004 (10)ref|XP_009774522.1|2e-09PREDICTED: U-box domain-containing protein 13-like isoform X1 [Nicotiana sylves661006770 (4)gb|EYU36264.1|8e-66hypothetical protein MIMGU_mgv1a002554mg [Erythranthe guttata]
JMFS100H01Sequence601000004 (10)ref|XP_009774522.1|2e-25PREDICTED: U-box domain-containing protein 13-like isoform X1 [Nicotiana sylves
JMFS142F04Sequence540000004 (10)ref|XP_009774522.1|5e-13PREDICTED: U-box domain-containing protein 13-like isoform X1 [Nicotiana sylves
JMFS159D10Sequence556000004 (10)ref|XP_009774522.1|6e-06PREDICTED: U-box domain-containing protein 13-like isoform X1 [Nicotiana sylves
JMSF019I22Sequence248000004 (10)

Alignment

This contig is upended


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JMFS100H01+                             GGTCACTTCTTGAAATTGATTTGTAATTTGATCCCTTTCTAA
                      ____________________________________________________________
consensus                               GGTCACTTCTTGAAATTGATTTGTAATTTGATCCCTTTCTAA
 
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JMFF024L16+                                                              CGATTCGAG
JMFS100H01+           CACCAGGAAAATCTTGCTGCCTTCCCCGCCAAATTTGAGCAAATCCTTAGCCGATTCGAG
                      ____________________________________________________________
consensus             CACCAGGAAAATCTTGCTGCCTTCCCCGCCAAATTTGAGCAAATCCTTAGCCGATTCGAG
 
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JMFF024L16+           AGCAGCCTTCAAAGAGAGCAGGGCTTTCAAGGAGGCTTCAGGGAGGGGCTCTTTGCTATC
JMFS100H01+           AGCAGCCTTCAAAGAGAGCAGGGCTTTCAAGGAGGCTTCAGGGAGGGGCTCTTTGCTATC
                      ____________________________________________________________
consensus             AGCAGCCTTCAAAGAGAGCAGGGCTTTCAAGGAGGCTTCAGGGAGGGGCTCTTTGCTATC
 
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JMFF024L16+           GCGAATCTCTTCAAACATTGGAGTCAAGAGCTTCAGCCGCCTAGCAAGGTTGCAGTACTG
JMFS100H01+           GCGAATCTCTTCAAACATTGGAGTCAAGAGCTTCAGCCGCCTAGCAAGGTTGCAGTACTG
JMFS142F04+                 CTCTTCAAACATTGGAGTCAAGAGCTTCAGCCGCCTAGCAAGGTTGCAGTACTG
JMFF036E12+                              GGAGTCAAGAGCTTCAGCCGCCTAGCAAGGTTGCAGTACTG
JMFS159D10+                                                   CTAGCAAGGTTGCAGTACTG
                      ____________________________________________________________
consensus             GCGAATCTCTTCAAACATTGGAGTCAAGAGCTTCAGCCGCCTAGCAAGGTTGCAGTACTG
 
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JMFF024L16+           CTTCTTCACCATGGACTTGAAGTCAGAAATGGCCGATATTTCGTTCGCCAACTCAATAAG
JMFS100H01+           CTTCTTCACCATGGACTTGAAGTCAGAAATGGCCGATATTTCGTTCGCCAACTCAATAAG
JMFS142F04+           CTTCTTCACCATGGACTTGAAGTCAGAAATGGCCGATATTTCGTTCGCCAACTCAATAAG
JMFF036E12+           CTTCTTCACCATGGACTTGAAGTCAGAAATGGCCGATATTTCGTTCGCCAACTCAATAAG
JMFF002J16+                                                     GTTCGCCAACTCAATAAG
JMFS159D10+           CTTCTTCACCATGGACTTGAAGTCAGAAATGGCCGATATTTCGTTCGCCAACTCAATAAG
                      ____________________________________________________________
consensus             CTTCTTCACCATGGACTTGAAGTCAGAAATGGCCGATATTTCGTTCGCCAACTCAATAAG
 
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JMFF024L16+           CTCCCTCGCTATAGCTTCTTTCTCTTCCCCCATGATTATTCCAGGAATCCAATCAACTAA
JMFS100H01+           CTCCCTCGCTATAGCTTCTTTCTCTTCCCCCATGATTATTCCAGGAATCCAATCAACTAA
JMFS142F04+           CTCCCTCGCTATAGCTTCTTTCTCTTCCCCCATGATTATTCCAGGAATCCAATCAACTAA
JMFF036E12+           CTCCCTCGCTATAGCTTCTTTCTCTTCCCCCATGATTATTCCAGGAATCCAATCAACTAA
JMFF002J16+           CTCCCTCGCTATAGCTTCTTTCTCTTCCCCCATGATTATTCCAGGAATCCAATCAACTAA
JMFS159D10+           CTCCCTCGCTATAGCTTCTTTCTCTTCCCCCATGATTATTCCAGGAATCCAATCAACTAA
JMFF009L22+                                        CCATGATTATTCCAGGAATCCAATCAACTAA
JMFF001L07+                                                                      A
                      ____________________________________________________________
consensus             CTCCCTCGCTATAGCTTCTTTCTCTTCCCCCATGATTATTCCAGGAATCCAATCAACTAA
 
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JMFF024L16+           AATCCAAAAAAGATTAAAACTTTTTGGAAAGGGGGGGAGGGAATTGCAAATTTGCAACGA
JMFS100H01+           AATCCAAAAAAGATTAAAACTTTTTGGAAAGGGGGGGAGGGAATTGCAAATTTGCAACGA
JMFS142F04+           AATCCAAAAAAGATTAAAACTTTTTGGAAAGGGGGGGAGGGAATTGCAAATTTGCAACGA
JMFF036E12+           AATCCAAAAAAGATTAAAACTTTTTGGAAAGGGGGGGAGGGAATTGCAAATTTGCAACGA
JMFF002J16+           AATCCAAAAAAGATTAAAACTTTTTGGAAAGGGGGGGAGGGAATTGCAAATTTGCAACGA
JMFS159D10+           AATCCAAAAAAGATTAAAACTTTTTGGAAAGGGGGGGAGGGAATTGCAAATTTGCAACGA
JMFF009L22+           AATCCAAAAAAGATTAAAACTTTTTGGAAAGGGGGGGAGGGAATTGCAAATTTGCAACGA
JMFF033C12+           AATCCAAAAAAGATTAAAACTTTTTGGAAAGGGGGGGAGGGAATTGCAAATTTGCAACGA
JMFF001L07+           AATCCAAAAAAGATTAAAACTTTTTGGAAAGGGGGGGAGGGAATTGCAAATTTGCAACGA
                      ____________________________________________________________
consensus             AATCCAAAAAAGATTAAAACTTTTTGGAAAGGGGGGGAGGGAATTGCAAATTTGCAACGA
 
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JMFF024L16+           AACTATTGCCTATTGCTATTGCTATTGCTCTCTCCTCCGCTGCTAAATCCGATCGAAGCG
JMFS100H01+           AACTATTGCCTATTGCTATTGCTATTGCTCTCTCCTCCGCTGCTAAATCCGATCGAAGCG
JMFS142F04+           AACTATTGCCTATTGCTATTGCTATTGCTCTCTCCTCCGCTGCTAAATCCGATCGAAGCG
JMFF036E12+           AACTATTGCCTATTGCTATTGCTATTGCTCTCTCCTCCGCAGCTAAATCCGATCGAAGCG
JMFF002J16+           AACTATTGCCTATTGCTATTGCTATTGCTCTCTCCTCCGCAGCTAAATCCGATCGAAGCG
JMFS159D10+           AACTATTGCCTATTGCTATTGCTATTGCTCTCTCCTCCGCTGCTAAATCCGATCGAAGCG
JMFF009L22+           AACTATTGCCTATTGCTATTGCTATTGCTCTCTCCTCCGCTGCTAAATCCGATCGAAGCG
JMFF033C12+           AACTATTGCCTATTGCTATTGCTATTGCTCTCTCCTCCGCTGCTAAATCCGATCGAAGCG
JMSF019I22+                                               CCGCTGCTAAATCCGATCGAAGCG
JMFF001L07+           AACTATTGCCTATTGCTATTGCTATTGCTCTCTCCTCCGCTGCTAAATCCGATCGAAGCG
                      ____________________________________________________________
consensus             AACTATTGCCTATTGCTATTGCTATTGCTCTCTCCTCCGCTGCTAAATCCGATCGAAGCG
 
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JMFF024L16+           ATGCGACCGCTGACCTGACCAGACGGTCGTCCCCGCCGCCATTGCAGACCTCATACCAAA
JMFS100H01+           ATGCGACCGCTGACCTGACCAGACGGTCGTCCCCGCCGCCATTGCAGACCTCATACCAAA
JMFS142F04+           ATGCGACCGCTGACCTGACCAGACGGTCGTCCCCGCCGCCATTGCAGACCTCATACCAAA
JMFF036E12+           ATGCGACCGCTGACCTGACCAGACGGTCGTCCCCGCCGCCATTGCAGACCTCATACCAAA
JMFF002J16+           ATGCGACCGCTGACCTGACCAGACGGTCGTCCCCGCCGCCATTGCAGACCTCATACCAAA
JMFS159D10+           ATGCGACCGCTGACCTGACCAGACGGTCGTCCCCGCCGCCATTGCAGACCTCATACCAAA
JMFF009L22+           ATGCGACCGCTGACCTGACCAGACGGTCGTCCCCGCCGCCATTGCAGACCTCATACCAAA
JMFF033C12+           ATGCGACCGCTGACCTGACCAGACGGTCGTCCCCGCCGCCATTGCAGACCTCATACCAAA
JMSF019I22+           ATGCGACCGCTGACCTGACCAGACGGTCGTCCCCGCCGCCATTGCAGACCTCATACCAAA
JMFF001L07+           ATGCGACCGCTGACCTGACCAGACGGTCGTCCCCGCCGCCATTGCAGACCTCATACCAAA
                      ____________________________________________________________
consensus             ATGCGACCGCTGACCTGACCAGACGGTCGTCCCCGCCGCCATTGCAGACCTCATACCAAA
 
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JMFF024L16+           GAAACGGAAAAGAAAAAGGAAGAAA                                   
JMFS100H01+           GAAACGGAAAAGAAAAAGGAAGAAAGGAGAGAGCTTTGGCCTTTGGGTCGAAGTTAAGGT
JMFS142F04+           GAAACGGAAAAGAAAAAGGAAGAAAGGAGAGAGCTTTGGCCTTTGGGTCGAAGTTAAGGT
JMFF036E12+           GAAACGGAAAAGAAAAAGGAAGAAAGGAGAGAGCTTTGGCCTTTGGGTCGAAGTTAAGGT
JMFF002J16+           GAAACGGAAAAGAAAAAGGAAGAAAGGAGAGAGCTTTGGCCTTTGGGTCGAAGTTAAGGT
JMFS159D10+           GAAACGGAAAAGAAAAAGGAAGAAAGGAGAGAGCTTTGGCCTTTGGGTCGAAGTTAAGGT
JMFF009L22+           GAAACGGAAAAGAAAAAGGAAGAAAGGAGAGAGCTTTGGCCTTTGGGTCGAAGTTAAGGT
JMFF033C12+           GAAACGGAAAAGAAAAAGGAAGAAAGGAGAGAGCTTTGGCCTTTGGGTCGAAGTTAAGGT
JMSF019I22+           GAAACGGAAAAGAAAAAGGAAGAAAGGAGAGAGCTTTGGCCTTTGGGTCGAAGTTAAGGT
JMFF001L07+           GAAACGGAAAAGAAAAAGGAAGAAAGGAGAGAGCTTTGGCCTTTGGGTCGAAGTTAAGGT
                      ____________________________________________________________
consensus             GAAACGGAAAAGAAAAAGGAAGAAAGGAGAGAGCTTTGGCCTTTGGGTCGAAGTTAAGGT
 
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JMFS100H01+           GGGGTTTTTACAGAGTCGC                                         
JMFS142F04+           GGGGTTTTTACAGAGTCGCCGGAAAACGGAAGGGATGAAAGTGAAGAGGCGGTGAGGTAT
JMFF036E12+           GGGGTTTTTACAGAGTCGCCGGAAAACGGAAGGGATGAAAGTGAAGAGGCGGTGAGGTAT
JMFF002J16+           GGGGTTTTTACAGAGTCGCCGGAAAACGGAAGGGATGAAAGTGAAGAGGCGGTGAGGTAT
JMFS159D10+           GGGGTTTTTACAGAGTCGCCGGAAAACGGAAGGGATGAAAGTGAAGAGGCGGTGAGGTAT
JMFF009L22+           GGGGTTTTTACAGAGTCGCCGGAAAACGGAAGGGATGAAAGTGAAGAGGCGGTGAGGTAT
JMFF033C12+           GGGGTTTTTACAGAGTCGCCGGAAAACGGAAGGGATGAAAGTGAAGAGGCGGTGAGGTAT
JMSF019I22+           GGGGTTTTTACAGAGTCGCCGGAAAACGGAAGGGATGAAAGTGAAGAGGCGGTGAGGTAT
JMFF001L07+           GGGGTTTTTACAGAGTCGCCGGAAAACGGAAGGGATGAAAGTGAAGAGGCGGTGAGGTAT
                      ____________________________________________________________
consensus             GGGGTTTTTACAGAGTCGCCGGAAAACGGAAGGGATGAAAGTGAAGAGGCGGTGAGGTAT
 
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JMFS142F04+           TTGAGAGAAGGTGGGCGGTGGGGCCTGGGAAGAAGACGAGTACAGCAAATCAGCAATGGG
JMFF036E12+           TTGAGAGAAGGTGGGCGGTGGGGCCTGGGAAGAAGACGAGTACAGCAAATCAGCAATGGG
JMFF002J16+           TTGAGAGAAGGTGGGCGGTGGGGCCTGGGAAGAAGACGAGTACAGCAAATCAGCAATGGG
JMFS159D10+           TTGAGAGAAGGTGGGCGGTGGGGCCTGGGAAGAAGACGAGTACAGCAAATCAGCAATGGG
JMFF009L22+           TTGAGAGAAGGTGGGCGGTGGGGCCTGGGAAGAAGACGAGTACAGCAAATCAGCAATGGG
JMFF033C12+           TTGAGAGAAGGTGGGCGGTGGGGCCTGGGAAGAAGACGAGTACAGCAAATCAGCAATGGG
JMSF019I22+           TTGAGAGAAGGTGGGCGGTGGGGCCTGGGAAGAAGACGAGTAC                 
JMFF001L07+           TTGAGAGAAGGTGGGCGGTGGGGCCTGGGAAGAAGACGAGTACAGCAAATCAGCAATGGG
                      ____________________________________________________________
consensus             TTGAGAGAAGGTGGGCGGTGGGGCCTGGGAAGAAGACGAGTACAGCAAATCAGCAATGGG
 
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JMFS142F04+           TCTTCG                                                      
JMFF036E12+           TCTTCGCAGGGTAAACGTTACAGGATGGGTGTGAAT                        
JMFF002J16+           TCTTCGCAGGGTAAACGTTACAGGATGGGTGTGAAT                        
JMFS159D10+           TCTTCGCAGGGTAAACGTTACAGGATGGGTGTGAATGCTTGGACGCGTCAGTGTAA    
JMFF009L22+           TCTTCGCAGGGTAAACGTTACAGGATGGGTGTGAATGCTTGGACGCGTCAGTGTAAGTAC
JMFF033C12+           TCTTCGCAGGGTAAACGTTACAGGATGGGTGTGAATGCTTGGACGCGTCAGTGTAAGTAC
JMFF001L07+           TCTTCGCAGGGTAAACGTTACAGGATGGGTGTGAATGCTTGGACGCGTCAGTGTAAGTAC
                      ____________________________________________________________
consensus             TCTTCGCAGGGTAAACGTTACAGGATGGGTGTGAATGCTTGGACGCGTCAGTGTAAGTAC
 
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JMFF009L22+           AGATGATGTTAACTCACAGCCATGAGCTGAGCTTTTTCCTCTTTAATTTGACTCCATCTC
JMFF033C12+           AGATGATGTTAACTCACAGCCATGAGCTGAGCTTTTTCCTCTTTAATTTGACTCCATCTC
JMFF001L07+           AGATGATGTTAACTCACAGCCATGAGCTGAGCTTTTTCCTCTTTAATTTGACTCCATCTC
                      ____________________________________________________________
consensus             AGATGATGTTAACTCACAGCCATGAGCTGAGCTTTTTCCTCTTTAATTTGACTCCATCTC
 
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JMFF009L22+           TATTCTCCCTCATCAAACAACAACCAGAACCAGTTATGACTTTACTTGAATCTTATGTCT
JMFF033C12+           TATTCTCCCTCATCAAACAACAACCAGAACCAGTTATGACTTTACTTGAATCTTATGTCT
JMFF001L07+           TATTCTCCCTCATCAAACAACAACCAGAACCAGTTATGACTTTACTTGAATCTTATGTCT
                      ____________________________________________________________
consensus             TATTCTCCCTCATCAAACAACAACCAGAACCAGTTATGACTTTACTTGAATCTTATGTCT