Clone JMSF035E14 [sequences]

contigF:003550 contigR:singlet
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
emb|CDO97975.1|13235e-10289-730492-706-1706unnamed protein product [Coffea canephora]
ref|XP_006343037.1|23134e-9889-727486-700-1700PREDICTED: RNA polymerase II-associated factor 1 homolog [Solanum tuberosum]
ref|XP_009786773.1|33116e-9889-727442-656-1656PREDICTED: RNA polymerase II-associated factor 1 homolog [Nicotiana sylvestris]
ref|XP_009608739.1|43116e-9889-727442-656-1656PREDICTED: RNA polymerase II-associated factor 1 homolog [Nicotiana tomentosiformis]
ref|XP_004235642.1|53107e-9789-727484-698-1698PREDICTED: RNA polymerase II-associated factor 1 homolog [Solanum lycopersicum]
ref|XP_007135633.1|72801e-8589-730449-661-1661hypothetical protein PHAVU_010G145300g [Phaseolus vulgaris] gb|ESW07627.1| hypothetical protein PHAVU_010G145300g [Phase
ref|XP_010098144.1|92773e-8492-730483-696-1697hypothetical protein L484_026278 [Morus notabilis] gb|EXB74581.1| hypothetical protein L484_026278 [Morus notabilis]
emb|CBI36059.3|62765e-8789-730207-420-1420unnamed protein product [Vitis vinifera]
ref|XP_002278075.3|102765e-8489-730489-702-1702PREDICTED: RNA polymerase II-associated factor 1 homolog [Vitis vinifera]
ref|XP_006583048.1|112742e-8389-730447-659-1659PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X1 [Glycine max] ref|XP_006583049.1| PREDICTED: RNA po
gb|KHN39254.1|82735e-8589-730270-482-1482RNA polymerase II-associated factor 1 like [Glycine soja]
ref|XP_010256861.1|132724e-8289-730519-734-1734PREDICTED: RNA polymerase II-associated factor 1 homolog [Nelumbo nucifera] ref|XP_010256862.1| PREDICTED: RNA polymera
ref|XP_003531647.1|152692e-8189-730454-666-1666PREDICTED: bromodomain-containing protein 4-like isoform X1 [Glycine max] ref|XP_006585570.1| PREDICTED: bromodomain-co
gb|KHN05332.1|122683e-8389-730269-481-1481RNA polymerase II-associated factor 1 like [Glycine soja]
ref|XP_007024309.1|172678e-8189-730448-662-1662Hydroxyproline-rich glycoprotein family protein isoform 3 [Theobroma cacao] gb|EOY26931.1| Hydroxyproline-rich glycopro
ref|XP_007024307.1|182671e-8089-730471-685-1685Hydroxyproline-rich glycoprotein family protein isoform 1 [Theobroma cacao] gb|EOY26929.1| Hydroxyproline-rich glycopro
ref|XP_007024308.1|142661e-8189-730348-562-1562Hydroxyproline-rich glycoprotein family protein isoform 2 [Theobroma cacao] gb|EOY26930.1| Hydroxyproline-rich glycopro
gb|KDO51788.1|202663e-8089-730463-671-1671hypothetical protein CISIN_1g005794mg [Citrus sinensis]
ref|XP_004155995.1|212664e-8089-730500-706-1706PREDICTED: uncharacterized LOC101203806 [Cucumis sativus]
ref|XP_006465693.1|162654e-8189-730362-570-1570PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X2 [Citrus sinensis]
gb|KJB35043.1|232658e-8089-730462-676-1676hypothetical protein B456_006G096900 [Gossypium raimondii] gb|KJB35044.1| hypothetical protein B456_006G096900 [Gossypiu
ref|XP_006426877.1|242641e-7989-730463-677-1677hypothetical protein CICLE_v10025066mg [Citrus clementina] gb|ESR40117.1| hypothetical protein CICLE_v10025066mg [Citrus
ref|XP_008462415.1|252643e-7989-730498-705-1705PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II-associated factor 1 homolog [Cucumis melo]
ref|XP_006465692.1|192633e-8089-730362-576-1576PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X1 [Citrus sinensis]
ref|XP_011080439.1|262612e-7889-730485-698-1698PREDICTED: RNA polymerase II-associated factor 1 homolog [Sesamum indicum]
gb|AET01517.2|272602e-7889-730450-660-1660Paf1 complex component [Medicago truncatula]
ref|XP_004510311.1|292582e-77110-730448-651-1657PREDICTED: RNA polymerase II-associated factor 1 homolog [Cicer arietinum]
ref|XP_008228451.1|302574e-7789-730446-658-1658PREDICTED: bromodomain-containing protein 4 [Prunus mume]
ref|XP_007225143.1|312575e-7789-730456-668-1668hypothetical protein PRUPE_ppa002485mg [Prunus persica] gb|EMJ26342.1| hypothetical protein PRUPE_ppa002485mg [Prunus pe
ref|XP_008222683.1|332577e-7789-730472-684-1684PREDICTED: RNA polymerase II-associated factor 1 homolog [Prunus mume]
ref|XP_007217663.1|352571e-7689-730497-709-1709hypothetical protein PRUPE_ppa002145mg [Prunus persica] gb|EMJ18862.1| hypothetical protein PRUPE_ppa002145mg [Prunus pe
ref|XP_002887861.1|282561e-77107-730362-569-1576hypothetical protein ARALYDRAFT_477298 [Arabidopsis lyrata subsp. lyrata] gb|EFH64120.1| hypothetical protein ARALYDRAF
ref|XP_010548643.1|322546e-77104-730353-559-1565PREDICTED: RNA polymerase II-associated factor 1 homolog [Tarenaya hassleriana]
ref|XP_008796955.1|362542e-76104-730368-579-1583PREDICTED: RNA polymerase II-associated factor 1 homolog [Phoenix dactylifera]
ref|XP_002303312.2|372533e-7689-730357-569-1569hydroxyproline-rich glycoprotein [Populus trichocarpa] gb|EEE78291.2| hydroxyproline-rich glycoprotein [Populus trichoca
ref|XP_006426878.1|382535e-76227-730463-630-1632hypothetical protein CICLE_v10025066mg [Citrus clementina] gb|ESR40118.1| hypothetical protein CICLE_v10025066mg [Citrus
gb|KHF99389.1|402533e-7589-730463-673-1673RNA polymerase II-associated factor 1 [Gossypium arboreum]
ref|XP_008367453.1|412533e-7589-730498-710-1710PREDICTED: RNA polymerase II-associated factor 1 homolog [Malus domestica]
ref|XP_008348493.1|432527e-7589-730497-709-1709PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II-associated factor 1 homolog [Malus domestica]
ref|XP_010417804.1|392512e-75158-730374-561-1585PREDICTED: RNA polymerase II-associated factor 1 homolog [Camelina sativa]
ref|XP_009353546.1|452511e-7489-730498-710-1710PREDICTED: RNA polymerase II-associated factor 1 homolog [Pyrus x bretschneideri]
ref|XP_004302858.1|462504e-7489-730481-693-1693PREDICTED: RNA polymerase II-associated factor 1 homolog [Fragaria vesca subsp. vesca]
ref|XP_009342534.1|472505e-7489-730498-710-1710PREDICTED: RNA polymerase II-associated factor 1 homolog [Pyrus x bretschneideri]
ref|XP_010473041.1|422497e-75158-730373-560-1584PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X2 [Camelina sativa]
ref|XP_010473040.1|442498e-75158-730379-566-1590PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X1 [Camelina sativa]
gb|KJB18584.1|482497e-74122-730461-667-1671hypothetical protein B456_003G061700 [Gossypium raimondii]
ref|XP_010510890.1|492477e-74158-730373-560-1585PREDICTED: RNA polymerase II-associated factor 1 homolog [Camelina sativa]
ref|XP_003627043.1|342439e-7789-70314-215-1215hypothetical protein MTR_8g014480 [Medicago truncatula]
ref|XP_011008105.1|532431e-7189-730459-672-1672PREDICTED: RNA polymerase II-associated factor 1 homolog [Populus euphratica]
ref|XP_002515964.1|542432e-7189-730458-672-1672conserved hypothetical protein [Ricinus communis] gb|EEF46384.1| conserved hypothetical protein [Ricinus communis]
ref|XP_006389738.1|502416e-73158-730227-417-1443hypothetical protein EUTSA_v10018561mg [Eutrema salsugineum] gb|ESQ27024.1| hypothetical protein EUTSA_v10018561mg [Eutr
gb|KDP40860.1|512412e-7289-730302-515-1515hypothetical protein JCGZ_24859 [Jatropha curcas]
gb|KJB18585.1|552414e-71233-730461-626-1646hypothetical protein B456_003G061700 [Gossypium raimondii]
ref|XP_010941164.1|562412e-7089-730517-732-1732PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4-like [Elaeis guineensis]
gb|KFK42379.1|602405e-69107-730862-1067-11075hypothetical protein AALP_AA2G248600 [Arabis alpina]
ref|XP_008794837.1|572394e-70218-730489-659-1663PREDICTED: bromodomain-containing protein 4-like [Phoenix dactylifera]
ref|XP_002298244.2|582396e-7089-730476-689-1689hydroxyproline-rich glycoprotein [Populus trichocarpa] gb|EEE83049.2| hydroxyproline-rich glycoprotein [Populus trichoca
ref|XP_010934933.1|592381e-69227-730518-685-1692PREDICTED: LOW QUALITY PROTEIN: SH3 domain-containing protein C23A1.17-like [Elaeis guineensis]
gb|EYU45831.1|522369e-72104-730188-390-1396hypothetical protein MIMGU_mgv1a007756mg [Erythranthe guttata]
ref|XP_009391055.1|612346e-6889-730515-730-1730PREDICTED: RNA polymerase II-associated factor 1 homolog [Musa acuminata subsp. malaccensis]
ref|NP_178091.2|622316e-68107-730376-582-1589protein early flowering 7 [Arabidopsis thaliana] gb|AEE36292.1| protein early flowering 7 [Arabidopsis thaliana]
gb|AAM10397.1|632316e-68107-730376-582-1589At1g79730/F19K16_29 [Arabidopsis thaliana] gb|AAO11627.1| At1g79730/F19K16_29 [Arabidopsis thaliana]
emb|CDY10443.1|642263e-66158-730364-554-1578BnaCnng03440D [Brassica napus]
ref|XP_009122771.1|652264e-66158-730362-552-1576PREDICTED: RNA polymerase II-associated factor 1 homolog [Brassica rapa]
emb|CDY40363.1|662264e-66158-730363-553-1577BnaA10g27050D [Brassica napus]
ref|NP_001061029.1|682221e-65101-730245-449-1451Os08g0157100 [Oryza sativa Japonica Group] dbj|BAC99509.1| proline-rich protein-like [Oryza sativa Japonica Group] dbj|B
gb|EEE68075.1|702229e-65101-730339-543-1545hypothetical protein OsJ_26103 [Oryza sativa Japonica Group]
gb|EEC82925.1|712224e-64101-730427-631-1633hypothetical protein OsI_27878 [Oryza sativa Indica Group]
ref|XP_006659135.1|692213e-65101-748239-449-1451PREDICTED: RNA polymerase II-associated factor 1 homolog [Oryza brachyantha]
ref|XP_011015860.1|672206e-66272-730205-357-1359PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II-associated factor 1 homolog, partial [Populus euphratica]
emb|CBI75547.1|732142e-6298-730248-453-1453Paf1 domain containing protein, expressed [Triticum aestivum] emb|CDM80198.1| unnamed protein product [Triticum aestivum
ref|XP_003573471.1|742139e-6189-730409-614-1614PREDICTED: RNA polymerase II-associated factor 1 homolog [Brachypodium distachyon]
ref|XP_006829032.1|762133e-60104-730470-685-1689hypothetical protein AMTR_s00001p00252660 [Amborella trichopoda] gb|ERM96448.1| hypothetical protein AMTR_s00001p0025266
ref|XP_008661635.1|782114e-60101-730416-621-1623PREDICTED: uncharacterized protein LOC100273854 isoform X1 [Zea mays]
ref|XP_010062533.1|832111e-5989-730504-720-1720PREDICTED: dynactin, 150 kDa isoform [Eucalyptus grandis] gb|KCW69680.1| hypothetical protein EUGRSUZ_F03078 [Eucalyptus
dbj|BAK06278.1|792107e-6089-730411-617-1617predicted protein [Hordeum vulgare subsp. vulgare]
dbj|BAJ92943.1|802101e-59158-730422-606-1627predicted protein [Hordeum vulgare subsp. vulgare]
dbj|BAJ94696.1|822101e-59158-730422-606-1627predicted protein [Hordeum vulgare subsp. vulgare] dbj|BAK01232.1| predicted protein [Hordeum vulgare subsp. vulgare]
ref|NP_001141723.1|722092e-63101-7307-212-1214uncharacterized protein LOC100273854 [Zea mays] gb|ACF86934.1| unknown [Zea mays] gb|AFW57301.1| hypothetical protein ZE
gb|AAF68118.1|AC010793_13812091e-59107-730382-586-1593F20B17.16 [Arabidopsis thaliana]
ref|XP_004972802.1|752082e-60101-730246-450-1452PREDICTED: RNA polymerase II-associated factor 1 homolog [Setaria italica]
ref|XP_008677077.1|772074e-60158-730247-432-1453PREDICTED: hypothetical protein isoform X1 [Zea mays] gb|AFW61197.1| hypothetical protein ZEAMMB73_933462 [Zea mays]
gb|EMS59209.1|842016e-59251-730130-294-1318hypothetical protein TRIUR3_01010 [Triticum urartu]
gb|EMT13177.1|852013e-58242-730222-386-1395hypothetical protein F775_10350 [Aegilops tauschii]
ref|XP_010665896.1|871984e-55164-730485-672-1700PREDICTED: RNA polymerase II-associated factor 1 homolog [Beta vulgaris subsp. vulgaris]
ref|XP_002445079.1|881941e-53101-730434-638-1640hypothetical protein SORBIDRAFT_07g003820 [Sorghum bicolor] gb|EES14574.1| hypothetical protein SORBIDRAFT_07g003820 [So
gb|AFK35982.1|861892e-56164-5921-141-1163unknown [Lotus japonicus]
gb|EMS49068.1|891879e-52173-709289-490-1557hypothetical protein TRIUR3_29381 [Triticum urartu]
ref|NP_001145766.1|901587e-44365-73073-195-1202hypothetical protein [Zea mays] gb|ACL52549.1| unknown [Zea mays] gb|AFW61198.1| hypothetical protein ZEAMMB73_933462 [Z
gb|AAG52243.1|AC011717_11931503e-38371-730382-500-1547unknown protein; 100211-103437 [Arabidopsis thaliana]
ref|XP_011011446.1|921499e-41440-73064-160-1165PREDICTED: RNA polymerase II-associated factor 1 homolog [Populus euphratica]
ref|XP_006300363.1|941493e-38107-625260-403-1410hypothetical protein CARUB_v10022183mg [Capsella rubella] gb|EOA33261.1| hypothetical protein CARUB_v10022183mg [Capsell
ref|XP_002969835.1|951491e-37263-730380-529-1599hypothetical protein SELMODRAFT_441016 [Selaginella moellendorffii] gb|EFJ28959.1| hypothetical protein SELMODRAFT_44101
ref|XP_002985172.1|961491e-37263-730382-531-1601hypothetical protein SELMODRAFT_446192 [Selaginella moellendorffii] gb|EFJ13666.1| hypothetical protein SELMODRAFT_44619
ref|XP_008380883.1|971482e-3789-514497-637-1637PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 1.1 [Malus domestica]
ref|XP_001759615.1|981172e-26179-730397-558-1588Paf1 complex protein [Physcomitrella patens] gb|EDQ75527.1| Paf1 complex protein [Physcomitrella patens]
ref|XP_006343038.1|10088.24e-17224-706199-303-1308PREDICTED: zinc finger CCCH domain-containing protein 4-like [Solanum tuberosum]
gb|EPS73458.1|10279.71e-13509-730395-468-1470hypothetical protein M569_01298, partial [Genlisea aurea]
ref|XP_007515630.1|10377.45e-13317-724219-359-1389predicted protein [Bathycoccus prasinos] emb|CCO14509.1| predicted protein [Bathycoccus prasinos]
ref|XP_005650500.1|10476.31e-12260-730204-360-1385hypothetical protein COCSUDRAFT_64915 [Coccomyxa subellipsoidea C-169] gb|EIE25956.1| hypothetical protein COCSUDRAFT_6
ref|XP_011400472.1|10565.19e-09317-730200-340-1387RNA polymerase II-associated factor 1-like protein [Auxenochlorella protothecoides] gb|KFM27495.1| RNA polymerase II-as
ref|XP_005703796.1|10660.14e-07317-730215-352-1406hypothetical protein Gasu_51340 [Galdieria sulphuraria] gb|EME27276.1| hypothetical protein Gasu_51340 [Galdieria sulphu
ref|XP_003140963.1|10758.22e-06263-748206-364-1385Paf1 family protein [Loa loa]
gb|EFO23108.2|10857.83e-06263-748206-357-1569Paf1 family protein [Loa loa]
gb|KDD75130.1|10957.05e-06173-730156-338-1365hypothetical protein H632_c854p2 [Helicosporidium sp. ATCC 50920]
ref|XP_005844827.1|11054.73e-05233-730211-377-1470hypothetical protein CHLNCDRAFT_138263 [Chlorella variabilis] gb|EFN52725.1| hypothetical protein CHLNCDRAFT_138263 [Chl
ref|XP_011402726.1|11153.56e-05329-730207-340-1426PREDICTED: RNA polymerase II-associated factor 1 homolog [Amphimedon queenslandica]
emb|CDP96654.1|11253.56e-05263-748206-357-1549Protein Bm2949 [Brugia malayi]
ref|XP_001892038.1|11352.41e-04329-748212-350-1353Paf1 family protein [Brugia malayi]
ref|XP_003381335.1|11652.42e-04263-730210-364-111981-pyrroline-5-carboxylate dehydrogenase [Trichinella spiralis] gb|EFV59049.1| 1-pyrroline-5-carboxylate dehydrogenase [T
ref|XP_002507133.1|11452.02e-04269-724201-350-1368PAF1 complex protein [Micromonas sp. RCC299] gb|ACO68391.1| PAF1 complex protein [Micromonas sp. RCC299]
emb|CEF96811.1|11552.02e-04251-730242-401-1417RNA polymerase II-associated, Paf1 [Ostreococcus tauri]
gb|ETN81321.1|11752.03e-04302-748192-341-1876hypothetical protein NECAME_08578 [Necator americanus]
ref|XP_004922631.1|11851.63e-04437-730203-298-1588PREDICTED: RNA polymerase II-associated factor 1 homolog [Bombyx mori]
ref|XP_002056628.1|11951.24e-04320-730205-340-1567GJ11046 [Drosophila virilis] gb|EDW59740.1| GJ11046 [Drosophila virilis]
ref|XP_002095980.1|12051.24e-04320-730205-340-1536GE25435 [Drosophila yakuba] gb|EDW95692.1| GE25435 [Drosophila yakuba]
ref|XP_002118290.1|12150.84e-04332-748173-308-1347hypothetical protein TRIADDRAFT_33941 [Trichoplax adhaerens] gb|EDV19224.1| hypothetical protein TRIADDRAFT_33941, parti
ref|XP_001978858.1|12250.85e-04317-730205-341-1538GG12571 [Drosophila erecta] gb|EDV47816.1| GG12571 [Drosophila erecta]
ref|XP_001994099.1|12350.86e-04242-730205-358-1566GH22996 [Drosophila grimshawi] gb|EDV94835.1| GH22996 [Drosophila grimshawi]
gb|ELU12581.1|12450.47e-04227-730185-346-1443hypothetical protein CAPTEDRAFT_117955 [Capitella teleta]
ref|XP_001359430.2|12550.47e-04320-730205-340-1559GA15378 [Drosophila pseudoobscura pseudoobscura] gb|EAL28576.2| GA15378 [Drosophila pseudoobscura pseudoobscura]
ref|XP_002017276.1|12650.47e-04320-730205-340-1559GL21617 [Drosophila persimilis] gb|EDW34376.1| GL21617 [Drosophila persimilis]
ref|XP_002000458.1|12750.48e-04317-730205-341-1575GI10242 [Drosophila mojavensis] gb|EDW15919.1| GI10242 [Drosophila mojavensis]
gb|EDL24138.1|12850.19e-04323-730140-275-1470Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae), isoform CRA_a [Mus musculus]
ref|XP_011370543.1|12950.10.001323-730195-330-1527PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X2 [Pteropus vampyrus]
ref|XP_006905452.1|13050.10.001323-730205-340-1537PREDICTED: RNA polymerase II-associated factor 1 homolog [Pteropus alecto] ref|XP_011370542.1| PREDICTED: RNA polymeras
ref|XP_001635059.1|13149.70.001351predicted protein [Nematostella vectensis] gb|EDO42996.1| predicted protein, partial [Nematostella vectensis]
ref|XP_010262891.1|101879.7279PREDICTED: uncharacterized protein LOC104601298 [Nelumbo nucifera]
ref|XP_004141783.1|226265706PREDICTED: uncharacterized protein LOC101203806 [Cucumis sativus] gb|KGN45581.1| hypothetical protein Csa_7G452360 [Cucu
ref|XP_011011447.1|99499.4122PREDICTED: uncharacterized protein LOC105116014 [Populus euphratica]
ref|XP_010510889.1|913152147PREDICTED: uncharacterized protein LOC104787083 [Camelina sativa]