Clone JMSF023C13 [sequences]

contigF:012616 contigR:012616
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
ref|XP_007017752.1|82472e-7875-6419-197+3791.71e-18519-749134-210-3243DNA-directed RNA polymerases, putative isoform 1 [Theobroma cacao] gb|EOY14977.1| DNA-directed RNA polymerases, putative
emb|CDP07419.1|62487e-7999-6411-181+32685.52e-16540-746119-187-3234unnamed protein product [Coffea canephora]
gb|KJB29635.1|112405e-7699-6411-181+3492.85e-19426-749118-224-3227hypothetical protein B456_005G111600 [Gossypium raimondii] gb|KJB29637.1| hypothetical protein B456_005G111600 [Gossypiu
ref|XP_008466500.1|132408e-7699-6351-179+31189.76e-18414-743120-230-3230PREDICTED: DNA-directed RNA polymerase I subunit rpa43 isoform X2 [Cucumis melo]
ref|XP_008466499.1|122407e-7699-6351-179+31389.01e-17414-743120-231-3231PREDICTED: DNA-directed RNA polymerase I subunit rpa43 isoform X1 [Cucumis melo]
gb|KJB29636.1|102393e-7699-6411-181+31687.82e-17540-749118-187-3197hypothetical protein B456_005G111600 [Gossypium raimondii]
ref|XP_004147835.1|152361e-7499-6351-179+31489.01e-17414-743120-231-3231PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like [Cucumis sativus] ref|XP_004154864.1| PREDICTED: DNA-direct
ref|XP_010246493.1|172362e-7499-6411-181+31588.62e-17540-743120-187-3236PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 isoform X1 [Nelumbo nucifera] ref|XP_010246494.1| PREDI
ref|XP_004492890.1|222342e-7399-6411-181+3990.54e-18516-746119-193-3232PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like [Cicer arietinum]
ref|XP_010246495.1|162362e-7499-6411-181+31887.83e-17426-746119-227-3232PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 isoform X2 [Nelumbo nucifera]
ref|XP_010271411.1|262321e-7299-6411-181+3890.92e-18423-746119-231-3232PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 [Nelumbo nucifera]
ref|XP_002510510.1|182354e-7499-6351-179+33483.21e-15435-746119-224-3229conserved hypothetical protein [Ricinus communis] gb|EEF52697.1| conserved hypothetical protein [Ricinus communis]
ref|XP_007139687.1|372263e-7099-6411-181+3692.01e-18426-746119-225-3232hypothetical protein PHAVU_008G050600g [Phaseolus vulgaris] gb|AGV54225.1| DNA-directed RNA polymerase I subunit rpa43-l
ref|XP_006435147.1|252329e-7399-6291-177+32884.74e-16426-743120-228-3233hypothetical protein CICLE_v10002352mg [Citrus clementina] gb|ESR48387.1| hypothetical protein CICLE_v10002352mg [Citrus
ref|XP_011045121.1|212341e-7399-6291-177+33882.42e-15570-746119-177-3230PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 isoform X1 [Populus euphratica]
ref|XP_002306915.2|202341e-7399-6291-177+33982.42e-15570-746119-177-3230hypothetical protein POPTR_0005s25810g [Populus trichocarpa] gb|EEE93911.2| hypothetical protein POPTR_0005s25810g [Popu
ref|NP_001236705.1|302291e-7199-6411-181+32386.31e-16540-746119-187-3232uncharacterized protein LOC100527229 [Glycine max] ref|XP_006601777.1| PREDICTED: uncharacterized protein LOC100527229 i
ref|XP_006473630.1|272311e-7299-6291-177+32984.34e-16426-746119-228-3233PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like isoform X1 [Citrus sinensis]
gb|EYU21110.1|142368e-7599-6351-179+35778.25e-14540-746119-187-3203hypothetical protein MIMGU_mgv1a014024mg [Erythranthe guttata]
ref|XP_010095165.1|242337e-7399-6261-176+34980.97e-15543-746119-186-3234putative DNA-directed RNA polymerase I subunit RPA43 [Morus notabilis] gb|EXB58395.1| putative DNA-directed RNA polymera
gb|EYU21111.1|192345e-7499-6351-179+35877.86e-14540-746119-187-3197hypothetical protein MIMGU_mgv1a014024mg [Erythranthe guttata]
gb|KDP36946.1|432212e-6899-6351-179+31089.75e-18426-746119-227-3229hypothetical protein JCGZ_08237 [Jatropha curcas]
ref|XP_006390285.1|342252e-7099-6411-181+32485.51e-16540-746119-187-3196hypothetical protein EUTSA_v10019169mg [Eutrema salsugineum] gb|ESQ27571.1| hypothetical protein EUTSA_v10019169mg [Eutr
ref|XP_011045122.1|232313e-7399-6321-178+35479.31e-14567-746119-178-3184PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 isoform X2 [Populus euphratica] ref|XP_011045123.1| PRE
ref|XP_008382547.1|322285e-7199-6411-181+34781.35e-15540-746119-187-3230PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like [Malus domestica]
ref|XP_006302682.1|392267e-7096-64174-255+33683.22e-15540-746193-261-3270hypothetical protein CARUB_v10020789mg, partial [Capsella rubella] gb|EOA35580.1| hypothetical protein CARUB_v10020789mg
ref|XP_002301988.2|382263e-7099-6291-177+34481.64e-15570-746119-177-3232hypothetical protein POPTR_0002s02620g [Populus trichocarpa] gb|EEE81261.2| hypothetical protein POPTR_0002s02620g [Popu
gb|EYU38832.1|282301e-7299-6411-181+36475.54e-13540-743120-187-3196hypothetical protein MIMGU_mgv1a014250mg [Erythranthe guttata]
emb|CDY13547.1|452193e-6899-6411-181+32186.37e-17540-746119-187-3197BnaC02g23580D [Brassica napus]
ref|XP_003534490.1|402235e-6999-6411-181+35080.98e-15549-746119-184-3232PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like isoform X1 [Glycine max] ref|XP_006587794.1| PREDICTED: DNA
ref|XP_008374577.1|422212e-6899-6411-181+34282.42e-15540-746119-187-3233PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like [Malus domestica]
ref|XP_002889036.1|412201e-6899-6411-181+33582.41e-15540-746119-187-3196hypothetical protein ARALYDRAFT_316494 [Arabidopsis lyrata subsp. lyrata] gb|EFH65295.1| hypothetical protein ARALYDRAF
gb|KHN22143.1|442213e-6899-6411-181+35180.98e-15549-746119-184-3232DNA-directed RNA polymerase I subunit rpa43 [Glycine soja]
ref|NP_565115.1|522151e-6699-6411-181+34182.02e-15540-746119-187-3196DNA-directed RNA polymerase [Arabidopsis thaliana] ref|NP_974148.1| DNA-directed RNA polymerase [Arabidopsis thaliana] g
gb|AAK93576.1|532143e-6699-6411-181+34082.02e-15540-746119-187-3196unknown protein [Arabidopsis thaliana]
ref|XP_008811422.1|512171e-6699-6261-176+35678.64e-14573-746119-176-3233PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 isoform X1 [Phoenix dactylifera] ref|XP_008811423.1| PR
gb|KFK42000.1|472187e-6899-6291-177+36077.48e-14549-746119-184-3197hypothetical protein AALP_AA2G199100 [Arabis alpina]
gb|KEH23413.1|552133e-6599-6411-179+34581.35e-15534-749118-187-3232DNA-directed RNA polymerase I subunit rpa43 [Medicago truncatula]
ref|XP_003624241.1|562133e-6599-6411-179+34880.96e-15540-749118-185-3228hypothetical protein MTR_7g080860 [Medicago truncatula] gb|ABN08995.1| Nucleic acid-binding, OB-fold [Medicago truncatul
gb|AFK42289.1|572082e-6399-6411-181+35380.51e-14522-743120-195-3232unknown [Lotus japonicus]
ref|XP_008235880.1|602039e-6199-6411-180+36277.81e-13540-743119-186-3287PREDICTED: uncharacterized protein LOC103334679 isoform X2 [Prunus mume]
ref|XP_008235878.1|612021e-6099-6411-180+36377.81e-13540-743119-186-3290PREDICTED: uncharacterized protein LOC103334679 isoform X1 [Prunus mume] ref|XP_008235879.1| PREDICTED: uncharacterized
ref|XP_007017753.1|631954e-59210-6231-138+32584.71e-16576-74981-138-3177DNA-directed RNA polymerases, putative isoform 2, partial [Theobroma cacao] gb|EOY14978.1| DNA-directed RNA polymerases
gb|EPS66698.1|582063e-6399-6411-180+36665.51e-09558-713129-180-3185hypothetical protein M569_08078, partial [Genlisea aurea]
gb|AAF87113.1|AC006434_9651803e-53198-6416-153+33781.62e-15540-74691-159-3168F10A5.14 [Arabidopsis thaliana]
ref|XP_009799626.1|72441e-7899-5541-152+3153PREDICTED: uncharacterized protein LOC104245676 isoform X2 [Nicotiana sylvestris]
ref|XP_009799625.1|92427e-7899-5541-152+3153PREDICTED: uncharacterized protein LOC104245676 isoform X1 [Nicotiana sylvestris]
ref|XP_007201370.1|731595e-44288-6411-118+36177.89e-14540-74656-124-3257hypothetical protein PRUPE_ppa010238mg [Prunus persica] gb|EMJ02569.1| hypothetical protein PRUPE_ppa010238mg [Prunus pe
ref|XP_004962862.1|671698e-4899-6351-200+36763.51e-08564-746139-200-3255PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like [Setaria italica]
gb|EAZ08148.1|661738e-5099-6261-177+37258.27e-07573-746119-177-3229hypothetical protein OsI_30413 [Oryza sativa Indica Group] gb|EEE65166.1| hypothetical protein OsJ_20268 [Oryza sativa J
gb|EEC69416.1|691672e-4799-6351-180+36862.43e-08513-746119-195-3234hypothetical protein OsI_38577 [Oryza sativa Indica Group]
gb|EEE53335.1|701672e-4799-6351-180+36962.03e-08513-746119-195-3234hypothetical protein OsJ_36345 [Oryza sativa Japonica Group]
ref|XP_006655836.1|681671e-4799-6261-177+37955.58e-06573-728125-177-3236PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like [Oryza brachyantha]
gb|KDO84795.1|821332e-35351-6291-93+32085.55e-17426-74635-143-3148hypothetical protein CISIN_1g032046mg [Citrus sinensis]
ref|XP_008811424.1|811395e-3799-6261-132+35579.02e-14573-74675-132-3189PREDICTED: uncharacterized protein LOC103722595 isoform X3 [Phoenix dactylifera]
ref|XP_003573700.1|721642e-4699-6261-177+38151.62e-04573-743120-177-3232PREDICTED: DNA-directed RNA polymerase I subunit rpa43 [Brachypodium distachyon]
gb|EMS55966.1|741557e-4399-6261-194+37756.64e-06420-743137-249-3250hypothetical protein TRIUR3_06265 [Triticum urartu]
gb|ACL53808.1|751523e-4199-6261-198+37557.42e-06516-746140-215-3257unknown [Zea mays] gb|AFW56550.1| hypothetical protein ZEAMMB73_966793 [Zea mays]
ref|NP_001143999.1|771515e-4199-6261-198+37457.42e-06516-746140-215-3257uncharacterized protein LOC100276818 [Zea mays] gb|ACG37056.1| hypothetical protein [Zea mays]
gb|ACG29934.1|761515e-4199-6261-198+37657.42e-06516-746140-215-3257hypothetical protein [Zea mays]
dbj|BAK05425.1|781515e-4199-6261-194+38054.32e-05429-743137-246-3250predicted protein [Hordeum vulgare subsp. vulgare]
ref|XP_006829853.1|801458e-3999-6351-181+37856.24e-06516-746119-196-3236hypothetical protein AMTR_s00119p00123540 [Amborella trichopoda] gb|ERM97269.1| hypothetical protein AMTR_s00119p0012354
ref|XP_010246497.1|641914e-5799-5511-151+3197PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 isoform X3 [Nelumbo nucifera]
ref|XP_002443282.1|881205e-29240-626105-240+37061.21e-07513-746182-258-3298hypothetical protein SORBIDRAFT_08g016920 [Sorghum bicolor] gb|EES17120.1| hypothetical protein SORBIDRAFT_08g016920 [So
ref|XP_002964357.1|851278e-3299-64119-204+38250.83e-04507-719146-224-3239hypothetical protein SELMODRAFT_405539 [Selaginella moellendorffii] gb|EFJ34690.1| hypothetical protein SELMODRAFT_40553
ref|XP_002967939.1|861253e-3199-64119-204+38349.30.001238hypothetical protein SELMODRAFT_408875 [Selaginella moellendorffii] gb|EFJ31286.1| hypothetical protein SELMODRAFT_40887
gb|ACL54693.1|901121e-2699-6261-174+37357.42e-06516-746116-191-3233unknown [Zea mays] gb|AFW56549.1| hypothetical protein ZEAMMB73_966793 [Zea mays]
ref|NP_001056924.2|791486e-4099-5601-154+3244Os06g0168400 [Oryza sativa Japonica Group] dbj|BAD67616.1| RNA polymerase Rpa43 subunit-like [Oryza sativa Japonica Grou
ref|XP_001764125.1|831324e-3499-6411-187+3228predicted protein [Physcomitrella patens] gb|EDQ70966.1| predicted protein [Physcomitrella patens]
ref|NP_001066925.2|871181e-2999-4671-123+3141Os12g0533600 [Oryza sativa Japonica Group] dbj|BAF29944.2| Os12g0533600 [Oryza sativa Japonica Group]
gb|ABR16301.1|891168e-2899-64116-198+3263unknown [Picea sitchensis]
ref|XP_005848517.1|9195.11e-1999-6111-171+3342hypothetical protein CHLNCDRAFT_145003 [Chlorella variabilis] gb|EFN56415.1| hypothetical protein CHLNCDRAFT_145003 [Chl
gb|KIZ04925.1|9290.92e-1878-6119-186+3275hypothetical protein MNEG_3029 [Monoraphidium neglectum]
ref|XP_006847582.1|9377.85e-1599-3591-88+388hypothetical protein AMTR_s00014p00228980, partial [Amborella trichopoda] gb|ERN09163.1| hypothetical protein AMTR_s000
ref|XP_005646809.1|9477.41e-13174-6173-150+3318hypothetical protein COCSUDRAFT_66534 [Coccomyxa subellipsoidea C-169] gb|EIE22265.1| hypothetical protein COCSUDRAFT_6
ref|XP_011398157.1|9573.62e-1193-6171-175+31092Elongation factor 2 [Auxenochlorella protothecoides] gb|KFM25265.1| Elongation factor 2 [Auxenochlorella protothecoides]
emb|CAN67093.1|9667.01e-09114-24846-90+3445hypothetical protein VITISV_001186 [Vitis vinifera]
emb|CAN67217.1|9765.14e-09114-24846-90+3448hypothetical protein VITISV_041888 [Vitis vinifera]
ref|XP_009493906.1|9863.97e-09123-59322-192+3295hypothetical protein H696_01723 [Fonticula alba] gb|KCV72328.1| hypothetical protein H696_01723 [Fonticula alba]
ref|XP_006681826.1|9960.12e-07114-61169-240+3361hypothetical protein BATDEDRAFT_91398 [Batrachochytrium dendrobatidis JAM81] gb|EGF77739.1| hypothetical protein BATDED
ref|XP_002953612.1|10057.82e-07129-55418-157+3157hypothetical protein VOLCADRAFT_118421 [Volvox carteri f. nagariensis] gb|EFJ45236.1| hypothetical protein VOLCADRAFT_11
ref|XP_003059970.1|10255.19e-06102-63236-226+3334predicted protein [Micromonas pusilla CCMP1545] gb|EEH55922.1| predicted protein [Micromonas pusilla CCMP1545]
ref|XP_001701742.1|10153.99e-0693-6264-187+3201predicted protein [Chlamydomonas reinhardtii] gb|EDP06717.1| predicted protein, partial [Chlamydomonas reinhardtii]
ref|XP_004344272.1|10452.01e-04108-5936-167+3273hypothetical protein CAOG_06651 [Capsaspora owczarzaki ATCC 30864]
gb|KJE96309.1|10551.61e-04108-5936-167+3272hypothetical protein CAOG_006651 [Capsaspora owczarzaki ATCC 30864]
ref|XP_002172812.1|10351.26e-0599-5961-171+3173DNA-directed RNA polymerase I complex subunit Rpa43 [Schizosaccharomyces japonicus yFS275] gb|EEB06519.1| DNA-directed
gb|EWM25972.1|10651.22e-04129-46439-152+3282twist neighbor [Nannochloropsis gaditana]
ref|XP_004829352.1|10751.22e-0496-53968-221+3237RNA polymerase Rpb7, N-terminal domain containing protein [Babesia equi] gb|AFZ79686.1| RNA polymerase Rpb7, N-terminal
ref|XP_647629.1|10950.44e-0457-6386-194+3356RNA polymerase I subunit [Dictyostelium discoideum AX4] sp|Q55FA4.1|RPA43_DICDI RecName: Full=Probable DNA-directed RNA
emb|CDI82533.1|11050.44e-04108-61187-275+3367hypothetical protein, conserved [Eimeria acervulina]
ref|XP_003284303.1|10849.32e-04141-5549-143+3144hypothetical protein DICPUDRAFT_27419 [Dictyostelium purpureum] gb|EGC39157.1| hypothetical protein DICPUDRAFT_27419 [Di
ref|XP_320441.3|11148.90.001246AGAP012084-PA [Anopheles gambiae str. PEST] gb|EAA00625.4| AGAP012084-PA [Anopheles gambiae str. PEST]
ref|XP_004239824.1|1929639107231PREDICTED: uncharacterized protein LOC101248579 [Solanum lycopersicum]
ref|XP_009128118.1|48921822985.9197PREDICTED: uncharacterized protein LOC103852969 [Brassica rapa] emb|CDY39047.1| BnaA02g17360D [Brassica napus]
ref|XP_011083508.1|5825043881.6236PREDICTED: uncharacterized protein LOC105166018 [Sesamum indicum]
ref|XP_002277373.1|4625019687.8233PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera] ref|XP_010664789.1| PREDICTED: uncharacterized protein
ref|XP_010055857.1|31622912689.4231PREDICTED: uncharacterized protein LOC104443986 [Eucalyptus grandis] gb|KCW72404.1| hypothetical protein EUGRSUZ_E00855
ref|XP_010428592.1|35622530683.2196PREDICTED: uncharacterized protein LOC104713216 [Camelina sativa]
ref|XP_006664075.1|71616571658.9234PREDICTED: uncharacterized protein LOC102712316 [Oryza brachyantha]
ref|XP_010533711.1|2952315592.0229PREDICTED: uncharacterized protein LOC104809415 [Tarenaya hassleriana] ref|XP_010533719.1| PREDICTED: uncharacterized pr
ref|XP_009358944.1|46522046581.3239PREDICTED: uncharacterized protein LOC103949555 [Pyrus x bretschneideri]
ref|XP_008346844.1|84512733581.6149PREDICTED: uncharacterized protein LOC103409835 [Malus domestica]
ref|XP_009400201.1|54321452380.5231PREDICTED: uncharacterized protein LOC103984443 [Musa acuminata subsp. malaccensis]
ref|XP_010918524.1|49221959277.8233PREDICTED: uncharacterized protein LOC105042872 [Elaeis guineensis]
ref|XP_006365851.1|2129311113231PREDICTED: uncharacterized protein LOC102591771 [Solanum tuberosum]
ref|XP_010692717.1|50121817188.2232PREDICTED: uncharacterized protein LOC104905781 [Beta vulgaris subsp. vulgaris]
ref|XP_004290119.1|62120165173.6245PREDICTED: uncharacterized protein LOC101292651 [Fragaria vesca subsp. vesca]
ref|XP_009598051.1|3028820108231PREDICTED: uncharacterized protein LOC104093920 [Nicotiana tomentosiformis] ref|XP_009598059.1| PREDICTED: uncharacteriz
ref|XP_010416455.1|33022531083.2196PREDICTED: uncharacterized protein LOC104702310 [Camelina sativa]
ref|XP_010471682.1|36022432083.2196PREDICTED: uncharacterized protein LOC104751440 [Camelina sativa] ref|XP_010471685.1| PREDICTED: uncharacterized protein
ref|XP_010061489.1|59020527085.1231PREDICTED: uncharacterized protein LOC104449150 [Eucalyptus grandis] ref|XP_010061490.1| PREDICTED: uncharacterized prot