Clone JMSF017E16 [sequences]

contigF:007904 contigR:007904
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
gb|EYU19240.1|12548e-8341-47834-180+212442e-78180-61734-180-2180hypothetical protein MIMGU_mgv1a014729mg [Erythranthe guttata]
ref|XP_004294361.1|22533e-8235-47829-175+222437e-78180-62329-175-2175PREDICTED: protein LHCP TRANSLOCATION DEFECT [Fragaria vesca subsp. vesca]
ref|XP_008226815.1|32511e-8135-47825-171+252415e-77180-62325-171-2171PREDICTED: protein LHCP TRANSLOCATION DEFECT [Prunus mume]
gb|KJB13634.1|52495e-8135-47826-172+232421e-77180-62924-172-2172hypothetical protein B456_002G085700 [Gossypium raimondii]
ref|XP_007212156.1|42503e-8135-47827-173+292408e-77180-62327-173-2173hypothetical protein PRUPE_ppa012342mg [Prunus persica] gb|EMJ13355.1| hypothetical protein PRUPE_ppa012342mg [Prunus pe
ref|XP_009799951.1|72491e-8035-47832-178+282416e-77180-62332-178-2178PREDICTED: protein LHCP TRANSLOCATION DEFECT [Nicotiana sylvestris]
ref|XP_006352499.1|82482e-8035-47827-172+242413e-77180-62327-172-2172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Solanum tuberosum]
emb|CDP05774.1|62499e-8135-47836-187+2112393e-76180-62336-187-2187unnamed protein product [Coffea canephora]
gb|KHG23632.1|92473e-8035-47826-172+272406e-77180-62924-172-2172lhcp translocation defect -like protein [Gossypium arboreum]
ref|XP_010327169.1|102473e-8035-47827-172+2102401e-76180-62327-172-2172PREDICTED: protein LHCP TRANSLOCATION DEFECT [Solanum lycopersicum]
ref|XP_011009295.1|112452e-7935-47826-171+262415e-77180-62924-171-2171PREDICTED: protein LHCP TRANSLOCATION DEFECT [Populus euphratica]
ref|XP_010062990.1|122452e-7935-47833-178+2132388e-76180-62333-178-2178PREDICTED: protein LHCP TRANSLOCATION DEFECT [Eucalyptus grandis] gb|KCW70157.1| hypothetical protein EUGRSUZ_F03446 [Eu
ref|XP_006370666.1|142431e-7835-47826-171+2122384e-76180-62924-171-2171hypothetical protein POPTR_0001s44690g [Populus trichocarpa] gb|ERP67235.1| hypothetical protein POPTR_0001s44690g [Popu
ref|XP_002281441.1|172431e-7868-47835-172+2142389e-76180-62924-172-2172PREDICTED: protein LHCP TRANSLOCATION DEFECT [Vitis vinifera] emb|CBI23956.3| unnamed protein product [Vitis vinifera]
ref|XP_011095364.1|132454e-7932-47832-180+2172359e-75180-62632-180-2180PREDICTED: protein LHCP TRANSLOCATION DEFECT [Sesamum indicum]
emb|CAN65357.1|152431e-7868-47835-172+2152363e-75180-62924-172-2172hypothetical protein VITISV_041274 [Vitis vinifera]
ref|XP_003598690.1|162431e-7832-47828-179+2212343e-74180-62628-179-2179hypothetical protein MTR_3g019320 [Medicago truncatula] gb|AES68941.1| LHCP translocation defect protein, putative [Medi
gb|ABK94006.1|222411e-7735-47826-171+2162365e-75180-62924-171-2171unknown [Populus trichocarpa]
ref|XP_009607225.1|202426e-7850-47837-178+2192342e-74180-60837-178-2178PREDICTED: protein LHCP TRANSLOCATION DEFECT [Nicotiana tomentosiformis]
ref|NP_001238318.1|182432e-7832-47829-177+2222334e-74180-62629-177-2177uncharacterized protein LOC100499940 [Glycine max] gb|ACU14277.1| unknown [Glycine max] gb|KHN19655.1| Protein LHCP TRAN
ref|XP_004493199.1|192425e-7844-47832-177+2242339e-74180-61432-177-2177PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Cicer arietinum]
ref|XP_002522996.1|242402e-7732-47829-175+2182342e-74180-62928-175-2175conserved hypothetical protein [Ricinus communis] gb|EEF39426.1| conserved hypothetical protein [Ricinus communis]
gb|KHG24756.1|252402e-7732-47826-173+2202343e-74180-62925-173-2173lhcp translocation defect -like protein [Gossypium arboreum]
ref|NP_001236074.1|212417e-7832-47833-181+2252321e-73180-62633-181-2181uncharacterized protein LOC100500557 [Glycine max] gb|ACU15672.1| unknown [Glycine max]
gb|AFK46964.1|232411e-7732-47828-175+2262313e-73180-62628-175-2175unknown [Lotus japonicus]
gb|KDP39089.1|272372e-7635-47829-174+2232335e-74180-62927-174-2174hypothetical protein JCGZ_00846 [Jatropha curcas]
gb|KJB62598.1|282384e-7632-47849-196+2272317e-73180-62948-196-2196hypothetical protein B456_009G425200 [Gossypium raimondii]
ref|XP_006452238.1|262398e-7735-47827-173+2302292e-72180-62327-173-2173hypothetical protein CICLE_v10009689mg [Citrus clementina] ref|XP_006493957.1| PREDICTED: protein LHCP TRANSLOCATION DEF
ref|XP_007020933.1|292376e-7635-47826-190+2282301e-72180-62924-190-2190Ankyrin repeat family protein [Theobroma cacao] gb|EOY12458.1| Ankyrin repeat family protein [Theobroma cacao]
ref|XP_010519276.1|302368e-7686-47847-178+2292292e-72180-57247-178-2178PREDICTED: protein LHCP TRANSLOCATION DEFECT [Tarenaya hassleriana]
ref|XP_009144936.1|312352e-7535-47830-176+2312271e-71180-62330-176-2176PREDICTED: protein LHCP TRANSLOCATION DEFECT [Brassica rapa] emb|CDY29612.1| BnaA05g15580D [Brassica napus]
ref|XP_007146415.1|322352e-7541-47828-172+2342264e-71180-61728-172-2172hypothetical protein PHAVU_006G038600g [Phaseolus vulgaris] gb|ESW18409.1| hypothetical protein PHAVU_006G038600g [Phase
ref|XP_009378658.1|342353e-7535-47826-172+2352255e-71180-62326-172-2172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Pyrus x bretschneideri] ref|XP_009368455.1| PREDICTED: protein LHCP T
gb|EPS57502.1|332343e-7541-4781-147+2332253e-71180-6171-147-2147hypothetical protein M569_17316, partial [Genlisea aurea]
ref|XP_009358134.1|352343e-7535-47826-172+2362255e-71180-62326-172-2172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Pyrus x bretschneideri]
ref|XP_002864707.1|372346e-7535-47831-177+2372258e-71180-62331-177-2177hypothetical protein ARALYDRAFT_919322 [Arabidopsis lyrata subsp. lyrata] gb|EFH40966.1| hypothetical protein ARALYDRAF
ref|XP_008775505.1|412323e-7435-47520-170+2322262e-71183-62320-170-2171PREDICTED: protein LHCP TRANSLOCATION DEFECT [Phoenix dactylifera]
ref|XP_009342580.1|362346e-7535-47826-172+2392241e-70180-62326-172-2172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Pyrus x bretschneideri]
emb|CDY07336.1|392331e-7435-47820-166+2382249e-71180-62320-166-2166BnaC05g26980D [Brassica napus]
ref|XP_008365459.1|382338e-7535-47826-172+2412242e-70180-62326-172-2172PREDICTED: protein LHCP TRANSLOCATION DEFECT [Malus domestica]
ref|XP_009147796.1|402332e-7435-47830-176+2402242e-70180-62330-176-2176PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Brassica rapa] emb|CDY25188.1| BnaC06g04130D [Brassica napus]
emb|CDY25178.1|422311e-7335-47831-177+2422229e-70180-62630-177-2177BnaC06g04030D [Brassica napus]
ref|XP_009417232.1|452294e-7365-47835-178+2442221e-69180-59335-178-2178PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Musa acuminata subsp. malaccensis]
ref|NP_564580.1|442294e-7386-47844-175+2452213e-69180-57244-175-2175protein GRANA DEFICIENT CHLOROPLAST 1 [Arabidopsis thaliana] sp|Q8VY88.1|LTD_ARATH RecName: Full=Protein LHCP TRANSLOCAT
ref|XP_009145616.1|432303e-7395-47849-177+2482206e-69180-56349-177-2177PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Brassica rapa] emb|CDY19631.1| BnaA05g20390D [Brassica napus]
ref|XP_010923930.1|492281e-7235-47821-172+2432221e-69180-62321-172-2172PREDICTED: protein LHCP TRANSLOCATION DEFECT [Elaeis guineensis]
ref|XP_006305698.1|472296e-7356-47837-177+2472206e-69180-60237-177-2177hypothetical protein CARUB_v10010432mg [Capsella rubella] gb|EOA38596.1| hypothetical protein CARUB_v10010432mg [Capsell
ref|XP_010488039.1|462295e-7335-47831-174+2502192e-68180-62331-174-2174PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref|XP_009406499.1|552274e-7265-47830-173+2462213e-69180-59330-173-2173PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Musa acuminata subsp. malaccensis]
ref|XP_006393099.1|502281e-7283-47844-176+2492191e-68180-57544-176-2176hypothetical protein EUTSA_v10011819mg [Eutrema salsugineum] gb|ESQ30385.1| hypothetical protein EUTSA_v10011819mg [Eutr
gb|AAG50930.1|AC079284_5582282e-7186-478126-257+2572191e-67180-572126-257-2257unknown protein [Arabidopsis thaliana]
ref|XP_010509075.1|482288e-7335-47829-172+2512183e-68180-62329-172-2172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref|XP_010466254.1|512282e-7235-47829-172+2522183e-68180-62329-172-2172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref|XP_010092116.1|522282e-7235-47829-180+2532184e-68180-62329-180-2180hypothetical protein L484_017804 [Morus notabilis] ref|XP_010102311.1| hypothetical protein L484_000390 [Morus notabilis
ref|XP_006406371.1|532272e-7298-47847-174+2552186e-68180-56047-174-2174hypothetical protein EUTSA_v10021639mg [Eutrema salsugineum] gb|ESQ47824.1| hypothetical protein EUTSA_v10021639mg [Eutr
emb|CDY29435.1|542272e-7298-47851-178+2542185e-68180-56051-178-2178BnaC05g32350D [Brassica napus]
ref|XP_010479551.1|572261e-7144-47834-177+2562179e-68180-61434-177-2177PREDICTED: protein LHCP TRANSLOCATION DEFECT [Camelina sativa]
ref|XP_006298590.1|602263e-7198-47873-200+2602165e-67204-56073-192-2200hypothetical protein CARUB_v10014674mg [Capsella rubella] gb|EOA31488.1| hypothetical protein CARUB_v10014674mg [Capsell
ref|XP_008385995.1|562251e-7135-47826-172+2592163e-67180-62326-172-2172PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Malus domestica]
ref|XP_010461933.1|592252e-7186-47846-177+2582162e-67180-57246-177-2177PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
ref|XP_010267698.1|622218e-7041-47827-175+2612157e-67180-61727-175-2175PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Nelumbo nucifera]
gb|KFK39362.1|612216e-7098-47847-174+2622141e-66180-56047-174-2174hypothetical protein AALP_AA3G234800 [Arabis alpina]
ref|XP_010267697.1|632211e-6956-47835-178+2652113e-65180-60235-178-2178PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Nelumbo nucifera]
ref|XP_004152919.1|642195e-6935-47825-168+2632128e-66180-62325-168-2168PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Cucumis sativus] ref|XP_004164338.1| PREDICTED: protein LHCP TRANSLOC
ref|XP_010500665.1|652196e-6986-47846-179+2672107e-65180-57246-179-2179PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Camelina sativa]
gb|KJB62599.1|672186e-6832-47849-236+2682111e-64180-62948-236-2236hypothetical protein B456_009G425200 [Gossypium raimondii]
ref|XP_008463435.1|662172e-6835-47825-168+2662104e-65180-62325-168-2168PREDICTED: protein LHCP TRANSLOCATION DEFECT [Cucumis melo]
gb|KHM99596.1|682166e-6832-43033-165+2642112e-65228-62633-165-2168Protein LHCP TRANSLOCATION DEFECT [Glycine soja]
ref|XP_010694198.1|692167e-6835-47828-170+2692091e-64180-62328-170-2170PREDICTED: protein LHCP TRANSLOCATION DEFECT [Beta vulgaris subsp. vulgaris]
ref|XP_006858083.1|702094e-6535-47242-190+2702041e-62189-62342-189-2192hypothetical protein AMTR_s00062p00076280 [Amborella trichopoda] gb|ERN19550.1| hypothetical protein AMTR_s00062p0007628
ref|XP_004957877.1|712094e-6535-47834-186+2712034e-62180-62334-186-2186PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Setaria italica]
ref|XP_002460789.1|722052e-6335-47534-183+2721992e-60183-62334-183-2184hypothetical protein SORBIDRAFT_02g034910 [Sorghum bicolor] gb|EER97310.1| hypothetical protein SORBIDRAFT_02g034910 [So
ref|NP_001144531.1|732031e-6235-47836-186+2731979e-60180-62336-186-2186hypothetical protein [Zea mays] gb|ACG41222.1| hypothetical protein [Zea mays] gb|ACN27552.1| unknown [Zea mays] tpg|DAA
ref|XP_006657768.1|741984e-6141-46618-164+2741932e-58192-61718-164-2168PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Oryza brachyantha]
dbj|BAJ89531.1|751942e-5953-47529-174+2761927e-58183-60529-174-2176predicted protein [Hordeum vulgare subsp. vulgare]
ref|XP_002972400.1|771933e-5932-46913-158+2751924e-58189-62613-158-2162hypothetical protein SELMODRAFT_228130 [Selaginella moellendorffii] gb|EFJ26486.1| hypothetical protein SELMODRAFT_22813
sp|A2YLX7.1|LTD_ORYSI761943e-5974-47833-171+2781891e-56180-58433-171-2172RecName: Full=Protein LHCP TRANSLOCATION DEFECT; Flags: Precursor [Oryza sativa Indica Group] sp|A3BKF2.1|LTD_ORYSJ Rec
ref|XP_002971877.1|781921e-5832-46913-158+2771902e-57189-62613-158-2162hypothetical protein SELMODRAFT_228083 [Selaginella moellendorffii] gb|EFJ26794.1| hypothetical protein SELMODRAFT_22808
ref|XP_003560142.1|791777e-5356-46634-169+2791752e-51192-60234-169-2174PREDICTED: protein LHCP TRANSLOCATION DEFECT [Brachypodium distachyon]
ref|XP_001769565.1|801614e-4798-4541-120+2801573e-45204-5601-120-2120predicted protein [Physcomitrella patens] gb|EDQ65558.1| predicted protein, partial [Physcomitrella patens]
ref|XP_003083273.1|831393e-3832-46310-151+2821374e-37228-62610-137-2153unnamed protein product [Ostreococcus tauri] emb|CAL57548.1| unnamed product [Ostreococcus tauri]
ref|XP_001694135.1|821402e-38122-43044-146+2841356e-36228-53644-146-2167predicted protein [Chlamydomonas reinhardtii] gb|EDP03071.1| predicted protein [Chlamydomonas reinhardtii]
gb|EMS68093.1|841389e-3844-47525-151+2831361e-36183-61425-151-2153hypothetical protein TRIUR3_10983 [Triticum urartu]
ref|XP_002956452.1|851372e-3792-43610-125+2851325e-35222-53621-125-2144hypothetical protein VOLCADRAFT_121531 [Volvox carteri f. nagariensis] gb|EFJ42596.1| hypothetical protein VOLCADRAFT_12
ref|XP_001419268.1|861292e-3435-46311-151+2861268e-33204-62311-148-2153predicted protein [Ostreococcus lucimarinus CCE9901] gb|ABO97561.1| predicted protein [Ostreococcus lucimarinus CCE9901]
ref|NP_001059804.2|871259e-34239-4781-80+2871211e-31180-4191-80-281Os07g0520800 [Oryza sativa Japonica Group] dbj|BAC79654.1| unknown protein [Oryza sativa Japonica Group] dbj|BAD30420.1|
ref|XP_005645073.1|881225e-32170-4609-105+2881206e-31216-4889-99-2113hypothetical protein COCSUDRAFT_18502 [Coccomyxa subellipsoidea C-169] gb|EIE20529.1| hypothetical protein COCSUDRAFT_1
dbj|BAF63496.1|891208e-32230-4781-84+2891149e-29180-4281-84-284hypothetical protein [Potamogeton distinctus]
ref|XP_003058743.1|901184e-3035-42114-138+2901151e-28237-62314-138-2159predicted protein [Micromonas pusilla CCMP1545] gb|EEH57198.1| predicted protein [Micromonas pusilla CCMP1545]
ref|XP_002503004.1|911184e-30116-46338-153+2911152e-28228-54238-139-2158predicted protein [Micromonas sp. RCC299] gb|ACO64262.1| predicted protein [Micromonas sp. RCC299]
ref|XP_007513555.1|921159e-29158-47560-168+2921126e-27204-50060-161-2169predicted protein [Bathycoccus prasinos] emb|CCO16080.1| predicted protein [Bathycoccus prasinos]
ref|XP_005849507.1|931063e-25113-46337-159+2931022e-23195-54537-159-2162hypothetical protein CHLNCDRAFT_142839 [Chlorella variabilis] gb|EFN57405.1| hypothetical protein CHLNCDRAFT_142839 [Chl
gb|AAP44675.1|9555.52e-06227-307144-170+29655.16e-06351-431144-170-2271hypothetical protein [Oryza sativa Japonica Group]
gb|ABF99352.1|9455.12e-06227-30717-43+29554.76e-06351-43117-43-2219hypothetical protein LOC_Os03g58280 [Oryza sativa Japonica Group]
gb|KIY98612.1|9755.54e-06290-442345-395+29754.32e-05216-368345-395-2410hypothetical protein MNEG_9350 [Monoraphidium neglectum]
ref|XP_001780054.1|9652.03e-06239-4001-54+29452.04e-06258-4191-54-255predicted protein [Physcomitrella patens] gb|EDQ55157.1| predicted protein, partial [Physcomitrella patens]
ref|XP_004294362.1|9851.63e-0535-22630-88+29851.21e-04200PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12-like isoform X1 [Fragaria vesca subsp. vesca]
ref|XP_011396291.1|9947.04e-0498hypothetical protein F751_1117 [Auxenochlorella protothecoides] gb|KFM23421.1| hypothetical protein F751_1117 [Auxenochl
ref|XP_009419639.1|818167818161343PREDICTED: uncharacterized protein LOC103999578 [Musa acuminata subsp. malaccensis]