Clone JMSF012I05 [sequences]

contigF:002144 contigR:004380

name	5'-sequence						3'-sequence						length	description
name	rank	score	Evalue	region1	region2	frame	rank	score	Evalue	region1	region2	frame	length	description
emb\|CDP02819.1\|	1	98.6	3e-20	138-554	1-129	+3	1	176	3e-47	365-706	574-687	-2	687	unnamed protein product [Coffea canephora]
ref\|XP_009794022.1\|	3	81.6	2e-14	129-554	1-130	+3	4	175	5e-47	371-709	566-679	-2	681	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Nicotiana sylvestris]
ref\|XP_009608223.1\|	4	81.6	2e-14	129-554	1-130	+3	3	175	5e-47	371-709	566-679	-2	681	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Nicotiana tomentosiformis]
ref\|XP_009621595.1\|	11	72.8	1e-11	129-554	1-130	+3	2	175	4e-47	371-709	567-680	-2	682	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X1 [Nicotiana tomentosiformis]
ref\|XP_011099592.1\|	5	79.0	1e-13	129-554	1-129	+3	11	154	2e-39	368-703	572-683	-2	683	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Sesamum indicum]
ref\|XP_006355443.1\|	29	62.8	2e-08	135-554	2-116	+3	7	162	2e-42	365-706	463-577	-2	577	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X3 [Solanum tuberosum]
ref\|XP_006355442.1\|	28	62.8	2e-08	135-554	2-116	+3	8	161	3e-42	365-706	543-657	-2	657	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X2 [Solanum tuberosum]
ref\|XP_006355441.1\|	27	62.8	2e-08	135-554	2-116	+3	9	161	4e-42	365-706	555-669	-2	669	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X1 [Solanum tuberosum]
ref\|XP_004245771.1\|	34	61.6	6e-08	135-554	2-116	+3	10	160	6e-42	365-706	555-669	-2	669	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum lycopersicum]
ref\|XP_009356671.1\|	8	77.8	3e-13	138-554	1-124	+3	14	143	2e-35	374-697	586-693	-2	695	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Pyrus x bretschneideri]
gb\|KDP31792.1\|	19	65.5	4e-09	138-554	1-156	+3	12	148	4e-37	368-706	607-719	-2	720	hypothetical protein JCGZ_12253 [Jatropha curcas]
ref\|XP_007201935.1\|	12	72.8	1e-11	138-554	1-132	+3	17	132	1e-31	368-679	594-697	-2	698	hypothetical protein PRUPE_ppa002228mg [Prunus persica] gb\|EMJ03134.1\| hypothetical protein PRUPE_ppa002228mg [Prunus pe
ref\|XP_004232385.1\|	37	60.8	1e-07	135-554	2-117	+3	15	140	9e-35	365-709	543-658	-2	659	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum lycopersicum]
ref\|XP_010254912.1\|	13	72.4	2e-11	135-554	2-134	+3	23	127	7e-30	368-670	580-680	-2	680	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Nelumbo nucifera]
gb\|AEI98616.1\|	2	98.2	3e-20	138-554	1-129	+3	66	99.0	6e-20	365-706	571-643	-2	643	hypothetical protein 111O18.3 [Coffea canephora]
ref\|XP_008241882.1\|	32	62.0	4e-08	138-554	1-132	+3	19	131	4e-31	368-679	592-695	-2	696	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Prunus mume]
gb\|ABU45174.1\|	33	61.6	6e-08	135-554	2-120	+3	18	131	2e-31	407-706	562-662	-2	664	unknown [Solanum melongena]
ref\|XP_008453719.1\|	25	64.3	7e-09	309-554	73-142	+3	22	128	4e-30	371-670	601-700	-2	702	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucumis melo]
gb\|ABU45189.1\|	18	66.2	2e-09	135-554	2-133	+3	27	125	2e-29	419-709	528-623	-2	629	unknown [Capsicum frutescens]
gb\|ABU45193.1\|	35	61.2	7e-08	180-554	15-118	+3	20	130	7e-31	431-706	567-659	-2	666	unknown [Petunia integrifolia subsp. inflata]
ref\|XP_004149158.1\|	31	62.4	4e-08	309-554	73-142	+3	26	126	2e-29	371-670	601-700	-2	702	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis sativus] gb\|KGN53263.1\| hypothetical protein Csa_
ref\|XP_004164787.1\|	30	62.4	4e-08	309-554	73-142	+3	28	125	4e-29	371-670	601-700	-2	702	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis sativus]
gb\|ABU45208.1\|	20	64.7	5e-09	135-554	2-117	+3	35	120	2e-27	425-709	551-646	-2	654	unknown [Solanum bulbocastanum]
ref\|XP_002525112.1\|	14	70.5	8e-11	144-554	4-139	+3	41	114	4e-25	431-658	586-661	-2	677	DNA-directed RNA polymerase, putative [Ricinus communis] gb\|EEF37239.1\| DNA-directed RNA polymerase, putative [Ricinus c
gb\|AAG01125.1\|AF273333_10	38	60.5	1e-07	135-554	2-117	+3	38	119	5e-27	401-664	550-638	-2	683	BAC19.10 [Solanum lycopersicum]
ref\|XP_002268044.2\|	49	52.8	4e-05	138-554	1-125	+3	29	124	1e-28	365-700	562-672	-2	672	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X4 [Vitis vinifera]
ref\|XP_010649168.1\|	50	52.8	4e-05	138-554	1-125	+3	31	124	1e-28	365-700	583-693	-2	693	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Vitis vinifera] ref\|XP_010649169.1\| PREDICTED: DNA-
ref\|XP_010649171.1\|	51	52.8	4e-05	138-554	1-125	+3	30	124	1e-28	365-700	567-677	-2	677	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3 [Vitis vinifera]
ref\|XP_010649170.1\|	52	52.8	4e-05	138-554	1-125	+3	32	124	1e-28	365-700	578-688	-2	688	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Vitis vinifera] emb\|CBI17549.3\| unnamed protein pro
ref\|XP_011025735.1\|	56	49.7	5e-04	138-554	1-135	+3	25	126	1e-29	368-658	569-665	-2	666	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Populus euphratica]
ref\|XP_007046991.1\|	41	57.8	1e-06	138-554	1-143	+3	42	113	7e-25	368-706	589-699	-2	700	SIN-like family protein, putative isoform 1 [Theobroma cacao] gb\|EOX91148.1\| SIN-like family protein, putative isoform 1
gb\|KJB43541.1\|	23	64.7	6e-09	138-554	1-146	+3	61	103	1e-21	368-706	592-702	-2	703	hypothetical protein B456_007G205200 [Gossypium raimondii] gb\|KJB43542.1\| hypothetical protein B456_007G205200 [Gossypiu
gb\|KHG05676.1\|	24	64.7	7e-09	138-554	1-153	+3	60	103	1e-21	368-706	599-709	-2	710	DNA-directed RNA polymerase III subunit RPC5 [Gossypium arboreum]
gb\|EPS66723.1\|	42	55.5	5e-06	381-554	58-114	+3	45	111	3e-24	371-688	488-594	-2	599	hypothetical protein M569_08053 [Genlisea aurea]
ref\|XP_003611964.1\|	55	51.2	1e-04	414-554	90-130	+3	40	115	9e-26	371-706	574-681	-2	683	DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula] ref\|XP_003636280.1\| DNA-directed RNA polymerase III s
ref\|XP_006366085.1\|							5	161	3e-43	365-706	273-387	-2	387	PREDICTED: uncharacterized protein LOC102595101 isoform X4 [Solanum tuberosum] ref\|XP_006366086.1\| PREDICTED: uncharact
ref\|XP_006366082.1\|							6	161	6e-43	365-706	312-426	-2	426	PREDICTED: uncharacterized protein LOC102595101 isoform X1 [Solanum tuberosum] ref\|XP_006366083.1\| PREDICTED: uncharact
ref\|XP_010906546.1\|	54	52.0	9e-05	426-554	97-139	+3	46	109	1e-23	377-685	594-695	-2	695	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3 [Elaeis guineensis]
ref\|XP_008777120.1\|	57	49.3	6e-04	426-554	103-145	+3	51	108	2e-23	377-688	599-701	-2	701	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Phoenix dactylifera]
ref\|XP_008777118.1\|	58	49.3	6e-04	426-554	103-145	+3	52	108	2e-23	377-688	600-702	-2	702	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Phoenix dactylifera] ref\|XP_008777119.1\| PREDICTED:
ref\|XP_006425717.1\|	48	53.1	3e-05	159-554	12-135	+3	62	103	1e-21	383-706	579-688	-2	690	hypothetical protein CICLE_v10025048mg [Citrus clementina] ref\|XP_006466762.1\| PREDICTED: DNA-directed RNA polymerase II
ref\|XP_007046993.1\|	40	57.8	1e-06	138-554	1-143	+3	69	95.5	1e-18	368-706	589-735	-2	736	Transcription regulators,zinc ion binding, putative isoform 3 [Theobroma cacao] gb\|EOX91150.1\| Transcription regulators
ref\|XP_010099361.1\|	10	73.2	1e-11	138-554	1-132	+3	75	77.4	8e-13	434-661	596-671	-2	732	DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis] gb\|EXB77882.1\| DNA-directed RNA polymerase III subunit RP
ref\|XP_009356672.1\|	6	78.2	2e-13	138-554	1-124	+3	78	66.6	2e-09	557-697	586-632	-2	672	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Pyrus x bretschneideri]
ref\|XP_010684808.1\|							16	134	2e-32	365-670	554-655	-2	655	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Beta vulgaris subsp. vulgaris]
gb\|KCW58600.1\|							21	128	4e-30	377-706	530-639	-2	640	hypothetical protein EUGRSUZ_H01260 [Eucalyptus grandis]
ref\|XP_010070044.1\|							24	127	8e-30	377-706	639-748	-2	749	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Eucalyptus grandis]
ref\|XP_002310208.2\|							34	122	6e-28	368-658	569-666	-2	667	hypothetical protein POPTR_0007s12540g [Populus trichocarpa] gb\|EEE90658.2\| hypothetical protein POPTR_0007s12540g [Popu
ref\|XP_007157070.1\|							33	120	2e-28	371-706	232-339	-2	341	hypothetical protein PHAVU_002G0404001g, partial [Phaseolus vulgaris] gb\|ESW29064.1\| hypothetical protein PHAVU_002G0404
ref\|XP_006590438.1\|							36	120	4e-27	371-706	589-696	-2	697	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Glycine max]
gb\|KHN35144.1\|							37	119	4e-27	371-706	589-696	-2	697	DNA-directed RNA polymerase III subunit RPC5 [Glycine soja]
gb\|KJB43539.1\|	21	64.7	6e-09	138-554	1-146	+3	87	51.2	4e-04	554-706	592-643	-2	653	hypothetical protein B456_007G205200 [Gossypium raimondii]
ref\|XP_003589437.1\|							39	115	2e-26	371-706	297-404	-2	406	hypothetical protein MTR_1g024320 [Medicago truncatula]
ref\|XP_002863995.1\|							43	113	7e-25	383-688	573-674	-2	676	hypothetical protein ARALYDRAFT_495012 [Arabidopsis lyrata subsp. lyrata] gb\|EFH40254.1\| hypothetical protein ARALYDRAF
ref\|XP_004300617.1\|							44	112	2e-24	365-700	575-685	-2	685	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Fragaria vesca subsp. vesca]
ref\|XP_010906545.1\|							47	109	1e-23	377-685	600-701	-2	701	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Elaeis guineensis]
ref\|XP_010906544.1\|							48	109	1e-23	377-685	601-702	-2	702	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Elaeis guineensis]
ref\|XP_010548346.1\|							49	109	2e-23	395-688	571-668	-2	674	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Tarenaya hassleriana]
ref\|XP_006395054.1\|							50	108	2e-23	383-688	579-680	-2	682	hypothetical protein EUTSA_v10003751mg [Eutrema salsugineum] gb\|ESQ32340.1\| hypothetical protein EUTSA_v10003751mg [Eutr
ref\|NP_199764.1\|							53	108	2e-23	383-688	586-687	-2	689	SIN-like protein [Arabidopsis thaliana] dbj\|BAB10766.1\| unnamed protein product [Arabidopsis thaliana] gb\|AED95826.1\| SI
ref\|XP_009392124.1\|							54	106	1e-22	377-685	571-672	-2	672	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Musa acuminata subsp. malaccensis]
emb\|CDX85415.1\|							56	105	3e-22	383-688	585-686	-2	688	BnaC07g27260D [Brassica napus]
ref\|XP_009151293.1\|							57	105	4e-22	383-688	589-690	-2	692	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Brassica rapa] emb\|CDX86230.1\| BnaA06g29470D [Brassica napus]
gb\|KJB14964.1\|							58	104	6e-22	368-706	514-624	-2	625	hypothetical protein B456_002G1516002, partial [Gossypium raimondii]
gb\|KDO79499.1\|							55	103	2e-22	383-706	314-423	-2	425	hypothetical protein CISIN_1g0055731mg, partial [Citrus sinensis]
gb\|KJB43540.1\|							59	103	1e-21	368-706	574-684	-2	685	hypothetical protein B456_007G205200 [Gossypium raimondii]
ref\|XP_006837050.1\|							63	100	2e-20	368-649	669-762	-2	763	hypothetical protein AMTR_s00110p00061160 [Amborella trichopoda] gb\|ERM99903.1\| hypothetical protein AMTR_s00110p0006116
ref\|XP_010440722.1\|							64	100	2e-20	383-688	589-690	-2	692	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X1 [Camelina sativa] ref\|XP_010440727.1\| PREDICTED
ref\|XP_010440734.1\|							65	100	2e-20	383-688	589-690	-2	692	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X3 [Camelina sativa]
ref\|XP_010442420.1\|							67	98.2	1e-19	383-688	586-687	-2	689	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Camelina sativa]
ref\|XP_010482228.1\|							68	95.5	9e-19	383-688	587-688	-2	690	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Camelina sativa] ref\|XP_010482229.1\| PREDICTED: DNA-direc
ref\|XP_004512016.1\|							70	88.6	2e-16	431-706	597-684	-2	689	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X1 [Cicer arietinum] ref\|XP_004512017.1\| PREDICTED
ref\|XP_007046992.1\|							71	84.3	4e-15	410-706	492-588	-2	588	Transcription regulators,zinc ion binding, putative isoform 2 [Theobroma cacao] gb\|EOX91149.1\| Transcription regulators
gb\|KDP42178.1\|							72	82.0	1e-14	491-706	249-317	-2	398	hypothetical protein JCGZ_02908 [Jatropha curcas]
ref\|XP_002988629.1\|							73	80.5	8e-14	368-658	531-624	-2	625	hypothetical protein SELMODRAFT_447395 [Selaginella moellendorffii] gb\|EFJ10425.1\| hypothetical protein SELMODRAFT_44739
ref\|XP_002979319.1\|							74	80.5	9e-14	368-658	531-624	-2	625	hypothetical protein SELMODRAFT_418944 [Selaginella moellendorffii] gb\|EFJ19727.1\| hypothetical protein SELMODRAFT_41894
ref\|XP_009621596.1\|	9	73.2	9e-12	129-554	1-130	+3							584	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X2 [Nicotiana tomentosiformis]
ref\|XP_006659992.1\|							76	67.8	1e-09	377-688	582-680	-2	682	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Oryza brachyantha]
ref\|XP_001757939.1\|							77	67.4	1e-09	368-649	740-831	-2	832	predicted protein [Physcomitrella patens] gb\|EDQ77181.1\| predicted protein [Physcomitrella patens]
ref\|XP_010254917.1\|	15	66.2	1e-09	135-554	2-135	+3							406	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X3 [Nelumbo nucifera]
ref\|XP_010254915.1\|	16	66.2	2e-09	135-554	2-135	+3							566	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X1 [Nelumbo nucifera]
ref\|XP_010254916.1\|	17	66.2	2e-09	135-554	2-135	+3							515	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X2 [Nelumbo nucifera]
ref\|XP_008453720.1\|	22	64.7	6e-09	309-554	73-142	+3							569	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Cucumis melo]
gb\|AFW75282.1\|							82	63.9	2e-08	377-688	516-616	-2	618	hypothetical protein ZEAMMB73_918312 [Zea mays]
ref\|XP_006355444.1\|	26	62.8	2e-08	135-554	2-116	+3							536	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X4 [Solanum tuberosum]
ref\|XP_003573633.1\|							83	62.4	6e-08	377-688	562-662	-2	663	PREDICTED: uncharacterized protein LOC100836051 isoform X1 [Brachypodium distachyon]
ref\|XP_008339313.1\|	36	60.1	1e-07	165-554	3-118	+3							326	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Malus domestica]
gb\|EYU44675.1\|	39	58.2	6e-07	171-554	15-138	+3							525	hypothetical protein MIMGU_mgv1a004477mg [Erythranthe guttata]
gb\|EMS67664.1\|							84	56.6	5e-06	377-688	488-588	-2	590	DNA-directed RNA polymerase III subunit RPC5 [Triticum urartu]
ref\|XP_007157071.1\|	43	54.7	8e-06	138-554	1-137	+3							363	hypothetical protein PHAVU_002G0404000g, partial [Phaseolus vulgaris] gb\|ESW29065.1\| hypothetical protein PHAVU_002G0404
ref\|XP_006363147.1\|	44	54.7	8e-06	138-554	1-117	+3							486	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum tuberosum]
dbj\|BAJ95336.1\|							85	53.9	4e-05	377-688	574-674	-2	676	predicted protein [Hordeum vulgare subsp. vulgare] dbj\|BAJ97170.1\| predicted protein [Hordeum vulgare subsp. vulgare]
ref\|XP_006425716.1\|	45	53.1	3e-05	159-554	12-135	+3							637	hypothetical protein CICLE_v10025048mg [Citrus clementina] gb\|ESR38956.1\| hypothetical protein CICLE_v10025048mg [Citrus
gb\|KDO79497.1\|	46	52.8	3e-05	159-554	12-135	+3							265	hypothetical protein CISIN_1g0055732mg, partial [Citrus sinensis] gb\|KDO79498.1\| hypothetical protein CISIN_1g0055732mg,
emb\|CAN60111.1\|	47	52.8	3e-05	138-554	1-125	+3							282	hypothetical protein VITISV_023619 [Vitis vinifera]
ref\|XP_006279575.1\|							86	52.8	1e-04	539-706	744-799	-2	800	hypothetical protein CARUB_v10025904mg [Capsella rubella] gb\|EOA12473.1\| hypothetical protein CARUB_v10025904mg [Capsell
ref\|XP_003612529.1\|	53	52.4	5e-05	138-554	1-138	+3							487	DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula] gb\|AES95487.1\| DNA-directed RNA polymerase III subuni
dbj\|BAK01665.1\|							88	51.2	4e-04	377-688	575-675	-2	677	predicted protein [Hordeum vulgare subsp. vulgare]
gb\|KJB43538.1\|							89	51.2	4e-04	554-706	574-625	-2	635	hypothetical protein B456_007G205200 [Gossypium raimondii]
gb\|EAZ42119.1\|							90	50.1	0.001	422-688	577-661	-2	673	hypothetical protein OsJ_26678 [Oryza sativa Japonica Group]
gb\|EAZ06297.1\|							91	50.1	0.001				673	hypothetical protein OsI_28532 [Oryza sativa Indica Group]
ref\|XP_006391982.1\|	59	49.3	6e-04										468	hypothetical protein EUTSA_v10023969mg, partial [Eutrema salsugineum] gb\|ESQ29268.1\| hypothetical protein EUTSA_v1002396
ref\|XP_008338604.1\|							13	9	144				457	PREDICTED: uncharacterized protein LOC103401669 [Malus domestica]
ref\|XP_004973130.1\|							80	9	64.3				449	PREDICTED: uncharacterized protein LOC101766969 [Setaria italica]
ref\|XP_008648747.1\|							81	8	63.9				677	PREDICTED: uncharacterized protein LOC103629388 [Zea mays] gb\|AFW75283.1\| hypothetical protein ZEAMMB73_918312 [Zea mays
ref\|XP_009762561.1\|	7	1	73.9										144	PREDICTED: uncharacterized protein LOC104214571 [Nicotiana sylvestris]
ref\|XP_008678432.1\|							79	1	62.0				178	PREDICTED: uncharacterized protein LOC103653271 [Zea mays]