Clone JMSF003E20 [sequences]

contigF:002144 contigR:004380

name	5'-sequence						3'-sequence						length	description
name	rank	score	Evalue	region1	region2	frame	rank	score	Evalue	region1	region2	frame	length	description
emb\|CDP02819.1\|	1	53.1	2e-05	131-325	1-51	+2	1	182	2e-49	370-720	571-687	-2	687	unnamed protein product [Coffea canephora]
ref\|XP_009794022.1\|	3	48.5	6e-04	122-328	1-64	+2	3	174	2e-46	376-711	567-679	-2	681	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Nicotiana sylvestris]
ref\|XP_009608223.1\|	4	48.1	7e-04				4	174	2e-46	376-711	567-679	-2	681	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Nicotiana tomentosiformis]
ref\|XP_009621595.1\|							2	174	2e-46	376-711	568-680	-2	682	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X1 [Nicotiana tomentosiformis]
ref\|XP_006355443.1\|							7	165	2e-43	370-714	462-577	-2	577	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X3 [Solanum tuberosum]
ref\|XP_006355442.1\|							8	165	2e-43	370-714	542-657	-2	657	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X2 [Solanum tuberosum]
ref\|XP_006366085.1\|							5	164	2e-44	370-714	272-387	-2	387	PREDICTED: uncharacterized protein LOC102595101 isoform X4 [Solanum tuberosum] ref\|XP_006366086.1\| PREDICTED: uncharact
ref\|XP_006366082.1\|							6	164	3e-44	370-714	311-426	-2	426	PREDICTED: uncharacterized protein LOC102595101 isoform X1 [Solanum tuberosum] ref\|XP_006366083.1\| PREDICTED: uncharact
ref\|XP_006355441.1\|							9	164	3e-43	370-714	554-669	-2	669	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X1 [Solanum tuberosum]
ref\|XP_004245771.1\|							10	164	4e-43	370-714	554-669	-2	669	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum lycopersicum]
gb\|AEI98616.1\|	2	53.1	2e-05	131-325	1-51	+2	63	105	5e-22	370-720	568-643	-2	643	hypothetical protein 111O18.3 [Coffea canephora]
ref\|XP_011099592.1\|							11	154	2e-39	373-717	569-683	-2	683	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Sesamum indicum]
gb\|KDP31792.1\|							12	151	3e-38	373-714	606-719	-2	720	hypothetical protein JCGZ_12253 [Jatropha curcas]
ref\|XP_009356671.1\|							14	143	2e-35	379-702	586-693	-2	695	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Pyrus x bretschneideri]
ref\|XP_004232385.1\|							15	141	8e-35	370-711	544-658	-2	659	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum lycopersicum]
ref\|XP_010684808.1\|							16	135	1e-32	370-720	536-655	-2	655	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Beta vulgaris subsp. vulgaris]
gb\|ABU45193.1\|							17	135	1e-32	436-717	565-659	-2	666	unknown [Petunia integrifolia subsp. inflata]
gb\|ABU45174.1\|							18	132	1e-31	406-711	562-664	-2	664	unknown [Solanum melongena]
ref\|XP_007201935.1\|							19	132	1e-31	373-684	594-697	-2	698	hypothetical protein PRUPE_ppa002228mg [Prunus persica] gb\|EMJ03134.1\| hypothetical protein PRUPE_ppa002228mg [Prunus pe
ref\|XP_008241882.1\|							21	131	4e-31	373-684	592-695	-2	696	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Prunus mume]
gb\|KCW58600.1\|							20	130	3e-31	382-714	529-639	-2	640	hypothetical protein EUGRSUZ_H01260 [Eucalyptus grandis]
ref\|XP_010070044.1\|							22	130	6e-31	382-714	638-748	-2	749	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Eucalyptus grandis]
ref\|XP_008453719.1\|							23	129	2e-30	376-714	588-700	-2	702	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucumis melo]
ref\|XP_011025735.1\|							24	129	2e-30	373-714	552-665	-2	666	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Populus euphratica]
ref\|XP_004149158.1\|							25	127	8e-30	376-714	588-700	-2	702	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis sativus] gb\|KGN53263.1\| hypothetical protein Csa_
ref\|XP_010254912.1\|							26	127	1e-29	373-675	580-680	-2	680	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Nelumbo nucifera]
ref\|XP_002268044.2\|							27	127	1e-29	370-714	559-672	-2	672	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X4 [Vitis vinifera]
ref\|XP_010649171.1\|							28	127	1e-29	370-714	564-677	-2	677	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3 [Vitis vinifera]
ref\|XP_004164787.1\|							29	127	1e-29	376-714	588-700	-2	702	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis sativus]
ref\|XP_010649170.1\|							30	127	1e-29	370-714	575-688	-2	688	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Vitis vinifera] emb\|CBI17549.3\| unnamed protein pro
ref\|XP_010649168.1\|							31	126	2e-29	370-714	580-693	-2	693	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Vitis vinifera] ref\|XP_010649169.1\| PREDICTED: DNA-
ref\|XP_002310208.2\|							32	124	1e-28	373-714	552-666	-2	667	hypothetical protein POPTR_0007s12540g [Populus trichocarpa] gb\|EEE90658.2\| hypothetical protein POPTR_0007s12540g [Popu
gb\|ABU45189.1\|							33	124	1e-28	424-711	529-623	-2	629	unknown [Capsicum frutescens]
ref\|XP_007157070.1\|							34	120	1e-28	376-711	232-339	-2	341	hypothetical protein PHAVU_002G0404001g, partial [Phaseolus vulgaris] gb\|ESW29064.1\| hypothetical protein PHAVU_002G0404
gb\|ABU45208.1\|							36	120	2e-27	430-711	552-646	-2	654	unknown [Solanum bulbocastanum]
gb\|KHN35144.1\|							37	120	2e-27	376-711	589-696	-2	697	DNA-directed RNA polymerase III subunit RPC5 [Glycine soja]
ref\|XP_006590438.1\|							38	120	3e-27	376-711	589-696	-2	697	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Glycine max]
ref\|XP_003589437.1\|							35	119	1e-27	376-714	296-404	-2	406	hypothetical protein MTR_1g024320 [Medicago truncatula]
gb\|AAG01125.1\|AF273333_10							39	119	5e-27	406-711	535-638	-2	683	BAC19.10 [Solanum lycopersicum]
ref\|XP_003611964.1\|							40	119	6e-27	376-714	573-681	-2	683	DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula] ref\|XP_003636280.1\| DNA-directed RNA polymerase III s
ref\|XP_007046991.1\|							42	117	5e-26	373-714	588-699	-2	700	SIN-like family protein, putative isoform 1 [Theobroma cacao] gb\|EOX91148.1\| SIN-like family protein, putative isoform 1
ref\|XP_002863995.1\|							41	116	5e-26	388-714	566-674	-2	676	hypothetical protein ARALYDRAFT_495012 [Arabidopsis lyrata subsp. lyrata] gb\|EFH40254.1\| hypothetical protein ARALYDRAF
ref\|XP_002525112.1\|							43	116	6e-26	436-714	569-661	-2	677	DNA-directed RNA polymerase, putative [Ricinus communis] gb\|EEF37239.1\| DNA-directed RNA polymerase, putative [Ricinus c
ref\|XP_006395054.1\|							44	112	1e-24	388-714	572-680	-2	682	hypothetical protein EUTSA_v10003751mg [Eutrema salsugineum] gb\|ESQ32340.1\| hypothetical protein EUTSA_v10003751mg [Eutr
ref\|NP_199764.1\|							45	112	2e-24	388-714	579-687	-2	689	SIN-like protein [Arabidopsis thaliana] dbj\|BAB10766.1\| unnamed protein product [Arabidopsis thaliana] gb\|AED95826.1\| SI
ref\|XP_004300617.1\|							46	112	2e-24	370-705	575-685	-2	685	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Fragaria vesca subsp. vesca]
ref\|XP_008777120.1\|							47	111	3e-24	382-720	587-701	-2	701	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Phoenix dactylifera]
ref\|XP_008777118.1\|							48	111	3e-24	382-720	588-702	-2	702	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Phoenix dactylifera] ref\|XP_008777119.1\| PREDICTED:
gb\|EPS66723.1\|							49	111	3e-24	376-693	488-594	-2	599	hypothetical protein M569_08053 [Genlisea aurea]
ref\|XP_010906546.1\|							50	110	8e-24	382-720	581-695	-2	695	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3 [Elaeis guineensis]
ref\|XP_010906545.1\|							51	110	9e-24	382-720	587-701	-2	701	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Elaeis guineensis]
ref\|XP_010906544.1\|							52	110	9e-24	382-720	588-702	-2	702	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Elaeis guineensis]
ref\|XP_010548346.1\|							54	109	2e-23	400-693	571-668	-2	674	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Tarenaya hassleriana]
gb\|KJB14964.1\|							55	108	4e-23	373-714	513-624	-2	625	hypothetical protein B456_002G1516002, partial [Gossypium raimondii]
gb\|KDO79499.1\|							53	107	1e-23	388-714	313-423	-2	425	hypothetical protein CISIN_1g0055731mg, partial [Citrus sinensis]
gb\|KJB43540.1\|							56	107	8e-23	373-714	573-684	-2	685	hypothetical protein B456_007G205200 [Gossypium raimondii]
gb\|KHG05676.1\|							57	107	8e-23	373-714	598-709	-2	710	DNA-directed RNA polymerase III subunit RPC5 [Gossypium arboreum]
gb\|KJB43541.1\|							58	107	9e-23	373-714	591-702	-2	703	hypothetical protein B456_007G205200 [Gossypium raimondii] gb\|KJB43542.1\| hypothetical protein B456_007G205200 [Gossypiu
ref\|XP_006425717.1\|							59	107	1e-22	388-714	578-688	-2	690	hypothetical protein CICLE_v10025048mg [Citrus clementina] ref\|XP_006466762.1\| PREDICTED: DNA-directed RNA polymerase II
ref\|XP_009151293.1\|							60	107	1e-22	388-714	582-690	-2	692	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Brassica rapa] emb\|CDX86230.1\| BnaA06g29470D [Brassica napus]
emb\|CDX85415.1\|							61	107	1e-22	388-714	578-686	-2	688	BnaC07g27260D [Brassica napus]
ref\|XP_009392124.1\|							62	107	1e-22	382-717	559-672	-2	672	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Musa acuminata subsp. malaccensis]
ref\|XP_010440722.1\|							64	103	2e-21	388-714	582-690	-2	692	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X1 [Camelina sativa] ref\|XP_010440727.1\| PREDICTED
ref\|XP_010440734.1\|							65	103	2e-21	388-714	582-690	-2	692	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X3 [Camelina sativa]
ref\|XP_010442420.1\|							66	101	7e-21	388-714	579-687	-2	689	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Camelina sativa]
ref\|XP_006837050.1\|							67	100	3e-20	373-654	669-762	-2	763	hypothetical protein AMTR_s00110p00061160 [Amborella trichopoda] gb\|ERM99903.1\| hypothetical protein AMTR_s00110p0006116
ref\|XP_007046993.1\|							68	99.8	4e-20	373-714	588-735	-2	736	Transcription regulators,zinc ion binding, putative isoform 3 [Theobroma cacao] gb\|EOX91150.1\| Transcription regulators
ref\|XP_010482228.1\|							69	99.0	6e-20	388-714	580-688	-2	690	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Camelina sativa] ref\|XP_010482229.1\| PREDICTED: DNA-direc
ref\|XP_004512016.1\|							70	92.4	1e-17	436-714	596-684	-2	689	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X1 [Cicer arietinum] ref\|XP_004512017.1\| PREDICTED
ref\|XP_007046992.1\|							71	88.2	2e-16	415-714	491-588	-2	588	Transcription regulators,zinc ion binding, putative isoform 2 [Theobroma cacao] gb\|EOX91149.1\| Transcription regulators
gb\|KDP42178.1\|							72	83.2	5e-15	496-711	249-317	-2	398	hypothetical protein JCGZ_02908 [Jatropha curcas]
ref\|XP_002988629.1\|							73	80.5	9e-14	373-663	531-624	-2	625	hypothetical protein SELMODRAFT_447395 [Selaginella moellendorffii] gb\|EFJ10425.1\| hypothetical protein SELMODRAFT_44739
ref\|XP_002979319.1\|							74	80.5	1e-13	373-663	531-624	-2	625	hypothetical protein SELMODRAFT_418944 [Selaginella moellendorffii] gb\|EFJ19727.1\| hypothetical protein SELMODRAFT_41894
ref\|XP_010099361.1\|							75	77.0	1e-12	439-666	596-671	-2	732	DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis] gb\|EXB77882.1\| DNA-directed RNA polymerase III subunit RP
ref\|XP_006659992.1\|							76	68.2	1e-09	382-693	582-680	-2	682	PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Oryza brachyantha]
ref\|XP_001757939.1\|							77	67.0	2e-09	373-654	740-831	-2	832	predicted protein [Physcomitrella patens] gb\|EDQ77181.1\| predicted protein [Physcomitrella patens]
ref\|XP_009356672.1\|							78	66.6	3e-09	562-702	586-632	-2	672	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Pyrus x bretschneideri]
gb\|AFW75282.1\|							82	63.9	2e-08	382-693	516-616	-2	618	hypothetical protein ZEAMMB73_918312 [Zea mays]
ref\|XP_003573633.1\|							83	62.8	6e-08	382-693	562-662	-2	663	PREDICTED: uncharacterized protein LOC100836051 isoform X1 [Brachypodium distachyon]
gb\|EMS67664.1\|							84	57.0	4e-06	382-693	488-588	-2	590	DNA-directed RNA polymerase III subunit RPC5 [Triticum urartu]
ref\|XP_006279575.1\|							85	56.2	8e-06	544-714	743-799	-2	800	hypothetical protein CARUB_v10025904mg [Capsella rubella] gb\|EOA12473.1\| hypothetical protein CARUB_v10025904mg [Capsell
gb\|KJB43539.1\|							86	54.7	2e-05	559-714	591-643	-2	653	hypothetical protein B456_007G205200 [Gossypium raimondii]
gb\|KJB43538.1\|							87	54.7	2e-05	559-714	573-625	-2	635	hypothetical protein B456_007G205200 [Gossypium raimondii]
dbj\|BAJ95336.1\|							88	54.3	3e-05	382-693	574-674	-2	676	predicted protein [Hordeum vulgare subsp. vulgare] dbj\|BAJ97170.1\| predicted protein [Hordeum vulgare subsp. vulgare]
dbj\|BAK01665.1\|							89	51.6	3e-04				677	predicted protein [Hordeum vulgare subsp. vulgare]
ref\|XP_008338604.1\|							13	9	143				457	PREDICTED: uncharacterized protein LOC103401669 [Malus domestica]
ref\|XP_004973130.1\|							80	9	64.7				449	PREDICTED: uncharacterized protein LOC101766969 [Setaria italica]
ref\|XP_008648747.1\|							81	8	64.3				677	PREDICTED: uncharacterized protein LOC103629388 [Zea mays] gb\|AFW75283.1\| hypothetical protein ZEAMMB73_918312 [Zea mays
ref\|XP_008678432.1\|							79	1	62.4				178	PREDICTED: uncharacterized protein LOC103653271 [Zea mays]