Clone JMSF003A01 [sequences]

contigF:003682 contigR:singlet
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
ref|XP_009777634.1|174.74e-13121-3001-60+121652e-43300-761476-619-3619PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 isoform X1 [Nicotiana sylvestris]
ref|XP_009619796.1|274.36e-13121-3001-60+151624e-42300-761476-620-3620PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Nicotiana tomentosiformis] r
ref|XP_009618724.1|471.27e-12121-30070-129+141624e-42300-761545-690-3690PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Nicotiana tomentosiformis]
ref|XP_004232589.1|3151.24e-05121-3001-60+111682e-44300-761474-617-3617PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Solanum lycopersicum]
ref|XP_009773556.1|373.61e-12103-300175-240+1101404e-34300-761656-801-3801PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Nicotiana sylvestris]
ref|XP_010649342.1|867.02e-10121-3001-60+171461e-36300-761478-627-3627PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Vitis vinifera]
ref|XP_010272854.1|667.41e-10121-3001-60+1111395e-34300-761481-631-3631PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Nelumbo nucifera] ref|XP_010272855.1| P
ref|XP_010272853.1|569.33e-11121-3001-60+1121373e-33300-761481-631-3631PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Nelumbo nucifera]
emb|CBI37506.3|767.41e-10121-3001-60+1131351e-32300-761478-607-3607unnamed protein product [Vitis vinifera]
gb|KCW53303.1|966.23e-10121-3001-60+1161321e-31300-731462-609-3609hypothetical protein EUGRSUZ_J02557 [Eucalyptus grandis]
ref|XP_010033606.1|1066.23e-10121-3001-60+1181321e-31300-731486-633-3633PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Eucalyptus grandis] gb|KCW53302.1| hypotheti
gb|KCW53301.1|1166.24e-10121-3001-60+1171321e-31300-731487-634-3634hypothetical protein EUGRSUZ_J02557 [Eucalyptus grandis]
ref|XP_006364840.1|2653.11e-05121-3001-60+181454e-36300-761474-618-3618PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Solanum tuberosum]
ref|XP_011087416.1|1556.67e-07154-3003-51+191401e-34300-761474-626-3626PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Sesamum indicum]
ref|XP_006483466.1|1655.81e-06121-3001-60+1201322e-31300-698500-628-3628PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Citrus sinensis]
ref|XP_006483559.1|1954.72e-06121-3001-60+1251291e-30300-731489-628-3628PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3-like isoform X1 [Citrus sinensis]
emb|CDP01757.1|2453.56e-06121-3001-62+1231306e-31300-761476-637-3637unnamed protein product [Coffea canephora]
ref|XP_006467185.1|2553.11e-05121-3001-60+1261262e-29315-731449-581-3588PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Citrus sinensis]
gb|KDP41755.1|1258.51e-07121-2941-55+1281197e-27300-761480-628-3628hypothetical protein JCGZ_26773 [Jatropha curcas]
ref|XP_010088711.1|1357.05e-07121-3001-60+1321159e-26300-695496-616-3616hypothetical protein L484_016497 [Morus notabilis] gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]
ref|XP_010674318.1|3448.92e-04163-30019-64+1271211e-27300-716500-634-3634PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Beta vulgaris subsp. vulgaris]
gb|KJB18645.1|2952.42e-05121-3001-59+1361143e-25300-761473-629-3629hypothetical protein B456_003G064600 [Gossypium raimondii] gb|KJB18646.1| hypothetical protein B456_003G064600 [Gossypiu
ref|XP_009777635.1|31652e-43300-761426-569-3569PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 isoform X2 [Nicotiana sylvestris] ref|XP_0097
ref|XP_008438040.1|3052.42e-05121-3001-60+1381122e-24300-731485-625-3625PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo] ref|XP_008438041.1| PREDICTED:
ref|XP_002524432.1|1755.52e-06121-3001-63+1431084e-23300-761492-640-3640transcription initiation factor ia, putative [Ricinus communis] gb|EEF37967.1| transcription initiation factor ia, putat
ref|XP_004155826.1|2254.34e-06121-3001-60+1461077e-23315-761477-618-3625PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Cucumis sativus]
ref|XP_009619798.1|61614e-42300-761426-570-3570PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Nicotiana tomentosiformis]
ref|XP_002307198.2|3647.86e-04166-30023-67+1391113e-24300-761491-637-3637RNA polymerase 1 specific transcription initiation factor RRN3 family protein [Populus trichocarpa] gb|EEE94194.2| RNA
ref|XP_004133864.1|2354.34e-06121-3001-60+1541049e-22315-761477-619-3626PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Cucumis sativus] gb|KGN56512.1| hypothe
ref|XP_002881355.1|3349.32e-04163-28219-58+1551041e-21300-731487-614-3614RNA polymerase I specific transcription initiation factor RRN3 family protein [Arabidopsis lyrata subsp. lyrata] gb|EFH
ref|XP_003534228.1|3747.86e-04160-30014-60+1691001e-20300-761477-628-3628PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Glycine max]
gb|KHN38852.1|3847.86e-04160-30014-60+1711002e-20300-761477-628-3628RNA polymerase I-specific transcription initiation factor RRN3 [Glycine soja]
ref|XP_010540653.1|3250.85e-05121-3001-60+18396.36e-19315-761476-608-3614PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Tarenaya hassleriana]
ref|XP_006483467.1|191311e-31300-731396-535-3535PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Citrus sinensis]
gb|KDO67466.1|151297e-32300-731153-292-3292hypothetical protein CISIN_1g0074032mg, partial [Citrus sinensis]
ref|XP_006483560.1|241298e-31300-731396-535-3535PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3-like isoform X2 [Citrus sinensis]
gb|KDO67298.1|211273e-31300-710160-292-3292hypothetical protein CISIN_1g0416052mg, partial [Citrus sinensis]
ref|XP_006483734.1|221275e-31300-710183-315-3315PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Citrus sinensis]
ref|XP_004287706.1|291181e-26300-689500-628-3628PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Fragaria vesca subsp. vesca]
gb|EYU37427.1|301172e-26300-761391-541-3541hypothetical protein MIMGU_mgv1a004171mg [Erythranthe guttata]
gb|KHF98889.1|2852.42e-05121-3001-59+111263.25e-08603-761473-523-3523RNA polymerase I-specific transcription initiation factor RRN3 [Gossypium arboreum]
ref|XP_008392869.1|331151e-25300-695430-555-3555PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Malus domestica]
ref|XP_008354575.1|341151e-25300-695502-627-3627PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Malus domestica]
ref|XP_009369775.1|351151e-25300-695502-627-3627PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Pyrus x bretschneideri]
ref|XP_007204094.1|371138e-25300-695494-622-3622hypothetical protein PRUPE_ppa002914mg [Prunus persica] gb|EMJ05293.1| hypothetical protein PRUPE_ppa002914mg [Prunus pe
ref|XP_010552505.1|3947.00.00110965.57e-09477-692478-550-3550PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Tarenaya hassleriana]
ref|XP_006483561.1|2054.73e-06121-3001-60+111957.06e-06603-710496-531-3534PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3-like isoform X3 [Citrus sinensis]
ref|XP_007134114.1|411108e-24300-761477-620-3620hypothetical protein PHAVU_010G020100g [Phaseolus vulgaris] gb|ESW06108.1| hypothetical protein PHAVU_010G020100g [Phase
ref|XP_011022128.1|421092e-23300-731499-637-3637PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Populus euphratica]
ref|XP_008242108.1|441084e-23300-761474-622-3622PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Prunus mume]
ref|XP_004508346.1|451085e-23321-761479-620-3620PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Cicer arietinum] ref|XP_0045
ref|XP_007204151.1|471079e-23300-695439-569-3569hypothetical protein PRUPE_ppa019726mg [Prunus persica] gb|EMJ05350.1| hypothetical protein PRUPE_ppa019726mg [Prunus pe
ref|XP_004966190.1|481079e-23315-698495-612-3618PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Setaria italica]
ref|XP_004966189.1|491071e-22315-698521-638-3644PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Setaria italica]
ref|NP_001140484.1|401063e-24312-76150-190-3195uncharacterized protein LOC100272544 [Zea mays] gb|ACF83926.1| unknown [Zea mays]
ref|XP_008681385.1|501062e-22315-761475-614-3620PREDICTED: uncharacterized protein LOC100272544 isoform X1 [Zea mays] gb|AFW69236.1| hypothetical protein ZEAMMB73_4573
gb|AFW69235.1|511062e-22315-761447-586-3592hypothetical protein ZEAMMB73_457339 [Zea mays]
ref|XP_003547884.1|531048e-22300-761477-627-3627PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Glycine max] ref|XP_00659925
ref|XP_006296428.1|571031e-21300-695494-608-3608hypothetical protein CARUB_v10025608mg [Capsella rubella] gb|EOA29326.1| hypothetical protein CARUB_v10025608mg [Capsell
gb|EMT22842.1|591032e-21315-761449-590-3604hypothetical protein F775_01666 [Aegilops tauschii]
ref|NP_850236.1|601033e-21300-731488-613-3613RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AAM20140.1| unknown pr
dbj|BAF01881.1|581021e-21300-731285-410-3410hypothetical protein [Arabidopsis thaliana]
gb|AAC16259.1|611023e-21300-731477-602-3602unknown protein [Arabidopsis thaliana]
ref|NP_174347.1|621024e-21315-731475-594-3604RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AEE31247.1| RNA polyme
gb|AAD25746.1|AC007060_4631024e-21315-731493-612-3622EST gb|Z37678 comes from this gene [Arabidopsis thaliana]
ref|XP_002437492.1|641026e-21315-761448-587-3593hypothetical protein SORBIDRAFT_10g028030 [Sorghum bicolor] gb|EER88859.1| hypothetical protein SORBIDRAFT_10g028030 [So
ref|XP_006656405.1|661027e-21315-761477-616-3622PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Oryza brachyantha]
gb|ACJ85821.1|561011e-21318-710158-283-3292unknown [Medicago truncatula]
ref|XP_006656406.1|651017e-21315-761452-591-3597PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Oryza brachyantha]
gb|KHN03116.1|521006e-22300-76162-214-3214RNA polymerase I-specific transcription initiation factor RRN3 [Glycine soja]
ref|XP_010913887.1|681001e-20315-698403-517-3523PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X3 [Elaeis guineensis]
ref|XP_010913886.1|701002e-20315-698482-596-3602PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Elaeis guineensis]
gb|EMS63005.1|721002e-20315-713430-556-3571hypothetical protein TRIUR3_02342 [Triticum urartu]
ref|XP_010913884.1|731002e-20315-698506-620-3626PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Elaeis guineensis] ref|XP_01
ref|XP_003563455.1|741003e-20315-713490-616-3622PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Brachypodium distachyon]
ref|XP_010227381.1|7599.05e-20315-695412-532-3538PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Brachypodium distachyon]
ref|XP_006415449.1|7797.13e-19315-731484-604-3614hypothetical protein EUTSA_v10007103mg [Eutrema salsugineum] gb|ESQ33802.1| hypothetical protein EUTSA_v10007103mg [Eutr
emb|CDY43658.1|7996.74e-19315-731478-598-3605BnaA04g20330D [Brassica napus]
ref|XP_010928803.1|8096.74e-19315-761463-604-3610PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Elaeis guineensis]
ref|NP_001058413.2|8196.75e-19315-761477-616-3622Os06g0688100 [Oryza sativa Japonica Group] dbj|BAD45608.1| putative RNA polymerase I transcription factor RRN3 [Oryza sa
gb|EEC81212.1|8296.35e-19315-761477-616-3622hypothetical protein OsI_24246 [Oryza sativa Indica Group]
ref|XP_010928802.1|8496.36e-19315-761487-628-3634PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Elaeis guineensis]
dbj|BAD45609.1|7695.99e-20315-761146-285-3291RNA polymerase I specific transcription initiation factor RRN3-like [Oryza sativa Japonica Group] dbj|BAD46065.1| RNA p
ref|XP_008782843.1|7895.94e-19315-701337-460-3466PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Phoenix dactylifera]
ref|XP_008782841.1|8595.51e-18315-698442-564-3570PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Phoenix dactylifera]
ref|XP_006410626.1|8794.43e-18300-731488-616-3616hypothetical protein EUTSA_v10016395mg [Eutrema salsugineum] gb|ESQ52079.1| hypothetical protein EUTSA_v10016395mg [Eutr
ref|XP_009391870.1|8894.43e-18315-695505-626-3632PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Musa acuminata subsp. malaccensis] ref|
ref|XP_009141397.1|8993.64e-18315-731470-590-3597PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Brassica rapa]
ref|XP_009411620.1|9093.26e-18315-695506-623-3629PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Musa acuminata subsp. malaccensis]
ref|XP_002893635.1|9193.27e-18315-731481-600-3610predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH69894.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
ref|XP_010516632.1|9292.88e-18300-731488-615-3615PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Camelina sativa] ref|XP_010516633.1| PR
ref|XP_010504951.1|9392.01e-17300-731489-616-3616PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Camelina sativa] ref|XP_010504952.1| PR
gb|KDO71565.1|8690.91e-18513-73160-132-3184hypothetical protein CISIN_1g0157611mg, partial [Citrus sinensis] gb|KDO71566.1| hypothetical protein CISIN_1g0157611mg,
ref|XP_010509710.1|9490.17e-17300-731487-613-3613PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Camelina sativa] ref|XP_010509711.1| PR
ref|XP_008805454.1|9590.17e-17315-698506-620-3626PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Phoenix dactylifera]
ref|XP_009133000.1|9690.17e-17300-731477-605-3605PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Brassica rapa]
emb|CDX84629.1|9789.78e-17300-731485-613-3613BnaA03g16010D [Brassica napus]
emb|CDX79576.1|9889.71e-16300-731481-608-3608BnaC03g19120D [Brassica napus]
gb|KFK44868.1|9987.83e-16315-731481-600-3608hypothetical protein AALP_AA1G312900 [Arabis alpina]
ref|XP_008242159.1|10084.74e-15372-695396-498-3701PREDICTED: LOW QUALITY PROTEIN: RNA polymerase I-specific transcription initiation factor rrn3-like, partial [Prunus mu
ref|XP_010460864.1|10179.03e-13315-698488-601-3611PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Camelina sativa]
ref|XP_006307098.1|10278.25e-13315-731462-570-3581hypothetical protein CARUB_v10008684mg [Capsella rubella] gb|EOA39996.1| hypothetical protein CARUB_v10008684mg [Capsell
ref|XP_009143744.1|10475.93e-12300-731476-597-3597PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Brassica rapa]
emb|CDY71933.1|10375.12e-12315-731230-340-3348BnaCnng75170D, partial [Brassica napus]
emb|CDY31637.1|10574.31e-11315-731462-576-3583BnaA05g09100D [Brassica napus]
emb|CDX84284.1|10668.29e-10315-662497-593-3600BnaC04g10460D [Brassica napus]
ref|XP_010519059.1|10865.96e-09477-692489-561-3561PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Tarenaya hassleriana]
ref|XP_001775034.1|11065.58e-09534-689486-541-3655predicted protein [Physcomitrella patens] gb|EDQ60141.1| predicted protein [Physcomitrella patens]
ref|XP_001771048.1|11164.72e-08270-674457-618-3624predicted protein [Physcomitrella patens] gb|EDQ64203.1| predicted protein [Physcomitrella patens]
gb|KDO71567.1|10762.83e-09600-73160-103-3109hypothetical protein CISIN_1g0157611mg, partial [Citrus sinensis]
ref|XP_006293892.1|11362.86e-08309-719479-581-3585hypothetical protein CARUB_v10022885mg [Capsella rubella] gb|EOA26790.1| hypothetical protein CARUB_v10022885mg [Capsell
ref|XP_002967968.1|11562.01e-07372-674529-626-3637hypothetical protein SELMODRAFT_440149 [Selaginella moellendorffii] gb|EFJ31315.1| hypothetical protein SELMODRAFT_44014
gb|KDO67467.1|11460.57e-08600-698164-196-3202hypothetical protein CISIN_1g0074032mg, partial [Citrus sinensis]
ref|XP_002963952.1|11659.78e-07372-674529-624-3635hypothetical protein SELMODRAFT_405493 [Selaginella moellendorffii] gb|EFJ34285.1| hypothetical protein SELMODRAFT_40549
ref|XP_010478481.1|11758.22e-06315-698486-587-3597PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3-like [Camelina sativa] ref|XP_010478483.1| PR
gb|KDO67299.1|1854.72e-06121-3001-60+1313hypothetical protein CISIN_1g0416051mg, partial [Citrus sinensis]
ref|NP_181457.2|12054.73e-05315-731460-565-3573RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|ABE65893.1| RNA polyme
gb|AAC28984.1|12154.73e-05315-731432-537-3545unknown protein [Arabidopsis thaliana]
ref|XP_006450178.1|1454.35e-07121-3001-60+1198hypothetical protein CICLE_v10010838mg [Citrus clementina] gb|ESR63418.1| hypothetical protein CICLE_v10010838mg [Citrus
ref|XP_006450295.1|11853.54e-06300-5721-87-387hypothetical protein CICLE_v10010647mg [Citrus clementina] gb|ESR63535.1| hypothetical protein CICLE_v10010647mg [Citrus
gb|KDO71562.1|2152.83e-06121-3001-60+1217hypothetical protein CISIN_1g0157612mg, partial [Citrus sinensis] gb|KDO71563.1| hypothetical protein CISIN_1g0157612mg,
ref|XP_006849976.1|12352.42e-04563hypothetical protein AMTR_s00022p00154500 [Amborella trichopoda] gb|ERN11557.1| hypothetical protein AMTR_s00022p0015450
ref|XP_002880116.1|12252.06e-05600-692107-137-3182hypothetical protein ARALYDRAFT_903869 [Arabidopsis lyrata subsp. lyrata] gb|EFH56375.1| hypothetical protein ARALYDRAF
ref|XP_010552506.1|3548.14e-04121-3001-60+1443PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Tarenaya hassleriana]
ref|XP_009359751.1|143132517PREDICTED: uncharacterized protein LOC103950283 [Pyrus x bretschneideri]
ref|XP_007046443.1|27152.8311117628Major facilitator superfamily protein isoform 1 [Theobroma cacao] ref|XP_007046444.1| Major facilitator superfamily prot
gb|KEH32234.1|67e101635transcription initiation factor ia protein, putative [Medicago truncatula]