Clone JMFS132C06 [sequences]

contigF:009024 contigR:

name	5'-sequence						3'-sequence						length	description
name	rank	score	Evalue	region1	region2	frame	rank	score	Evalue	region1	region2	frame	length	description
ref\|XP_004247135.1\|	1	117	2e-26	84-620	1-172	+3							825	PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Solanum lycopersicum]
ref\|XP_006355885.1\|	2	114	3e-25	84-620	1-172	+3							821	PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Solanum tuberosum] ref\|XP_006355886.1\| PREDICTED: pre-mRNA-pr
ref\|XP_010326347.1\|	3	113	4e-25	84-620	1-173	+3							826	PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Solanum lycopersicum] ref\|XP_010326348.1\| PREDICTED: pre-mRNA-proc
ref\|XP_011080112.1\|	4	101	8e-21	333-620	81-180	+3							831	PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Sesamum indicum]
gb\|EYU46400.1\|	5	99.4	3e-20	279-620	1-131	+3							769	hypothetical protein MIMGU_mgv1a001721mg [Erythranthe guttata]
gb\|EYU46401.1\|	6	99.4	3e-20	279-620	1-131	+3							768	hypothetical protein MIMGU_mgv1a001721mg [Erythranthe guttata]
ref\|XP_009621766.1\|	7	96.3	3e-19	84-620	1-168	+3							812	PREDICTED: pre-mRNA-processing factor 39 [Nicotiana tomentosiformis]
ref\|XP_009802614.1\|	8	94.0	2e-18	84-620	1-168	+3							812	PREDICTED: pre-mRNA-processing factor 39 [Nicotiana sylvestris]
gb\|KHG05766.1\|	9	82.4	2e-14	57-620	52-228	+3							849	prp39 [Gossypium arboreum]
ref\|XP_007199707.1\|	10	82.0	2e-14	84-620	1-168	+3							823	hypothetical protein PRUPE_ppa001458mg [Prunus persica] gb\|EMJ00906.1\| hypothetical protein PRUPE_ppa001458mg [Prunus pe
ref\|XP_011459709.1\|	11	80.9	5e-14	84-620	1-173	+3							816	PREDICTED: pre-mRNA-processing factor 39 [Fragaria vesca subsp. vesca]
ref\|XP_007050169.1\|	12	80.9	5e-14	84-620	1-164	+3							815	Tetratricopeptide repeat (TPR)-like superfamily protein, putative isoform 1 [Theobroma cacao] ref\|XP_007050170.1\| Tetra
ref\|XP_008235600.1\|	13	80.5	6e-14	84-620	1-173	+3							827	PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Prunus mume]
ref\|XP_008235597.1\|	14	80.5	6e-14	84-620	1-173	+3							828	PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Prunus mume] ref\|XP_008235599.1\| PREDICTED: pre-mRNA-processing fac
gb\|KHG05765.1\|	16	80.1	8e-14	21-620	50-236	+3							857	prp39 [Gossypium arboreum]
ref\|XP_009370432.1\|	17	79.3	2e-13	84-620	1-172	+3							839	PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Pyrus x bretschneideri]
ref\|XP_009370417.1\|	18	79.3	2e-13	84-620	1-172	+3							840	PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Pyrus x bretschneideri] ref\|XP_009370424.1\| PREDICTED: pre-mRNA-pr
ref\|XP_009370440.1\|	19	79.3	2e-13	84-620	1-172	+3							830	PREDICTED: pre-mRNA-processing factor 39 isoform X3 [Pyrus x bretschneideri]
ref\|XP_009370448.1\|	20	79.3	2e-13	84-620	1-172	+3							829	PREDICTED: pre-mRNA-processing factor 39 isoform X4 [Pyrus x bretschneideri]
gb\|KJB11038.1\|	21	78.2	3e-13	84-620	1-165	+3							811	hypothetical protein B456_001G237700 [Gossypium raimondii]
gb\|KJB11037.1\|	22	78.2	3e-13	84-620	1-165	+3							745	hypothetical protein B456_001G237700 [Gossypium raimondii]
gb\|KHG20280.1\|	15	77.4	8e-14	66-620	67-229	+3							244	hypothetical protein F383_25191 [Gossypium arboreum]
emb\|CDP03792.1\|	23	77.4	4e-13	441-620	120-179	+3							454	unnamed protein product [Coffea canephora]
gb\|KJB11039.1\|	24	77.4	5e-13	84-620	1-165	+3							643	hypothetical protein B456_001G237700 [Gossypium raimondii]
ref\|XP_008372391.1\|	25	75.1	4e-12	84-620	1-177	+3							834	PREDICTED: pre-mRNA-processing factor 39-like isoform X2 [Malus domestica]
ref\|XP_008372390.1\|	26	75.1	4e-12	84-620	1-177	+3							835	PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Malus domestica]
ref\|XP_008382720.1\|	27	73.6	1e-11	84-620	1-173	+3							825	PREDICTED: pre-mRNA-processing factor 39-like isoform X2 [Malus domestica]
ref\|XP_008382719.1\|	28	73.6	1e-11	84-620	1-173	+3							826	PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Malus domestica]
ref\|XP_010036162.1\|	29	69.7	2e-10	84-620	1-171	+3							723	PREDICTED: pre-mRNA-processing factor 39 isoform X4 [Eucalyptus grandis]
gb\|KJB10034.1\|	30	68.6	4e-10	84-620	1-116	+3							625	hypothetical protein B456_001G181500 [Gossypium raimondii]
ref\|XP_002272685.1\|	31	67.8	8e-10	84-620	1-179	+3							832	PREDICTED: pre-mRNA-processing factor 39 [Vitis vinifera]
gb\|KJB10040.1\|	32	67.4	1e-09	84-620	1-115	+3							668	hypothetical protein B456_001G181500 [Gossypium raimondii]
ref\|XP_002526546.1\|	33	65.9	4e-09	84-620	1-175	+3							829	Pre-mRNA-processing protein prp39, putative [Ricinus communis] gb\|EEF35824.1\| Pre-mRNA-processing protein prp39, putativ
ref\|XP_010920282.1\|	34	65.9	4e-09	84-620	1-174	+3							821	PREDICTED: pre-mRNA-processing factor 39-like [Elaeis guineensis] ref\|XP_010920283.1\| PREDICTED: pre-mRNA-processing fac
ref\|XP_010262448.1\|	35	65.9	4e-09	93-620	3-185	+3							833	PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Nelumbo nucifera]
gb\|KHG11111.1\|	36	65.5	5e-09	84-620	1-164	+3							832	Pre-mRNA-processing factor 39 [Gossypium arboreum]
ref\|XP_002320608.2\|	37	65.1	7e-09	84-620	1-181	+3							830	hypothetical protein POPTR_0014s18740g [Populus trichocarpa] gb\|EEE98923.2\| hypothetical protein POPTR_0014s18740g [Popu
ref\|XP_011024481.1\|	38	63.5	2e-08	84-620	1-160	+3							812	PREDICTED: pre-mRNA-processing factor 39-like isoform X2 [Populus euphratica]
ref\|XP_011024477.1\|	39	63.5	2e-08	84-620	1-160	+3							813	PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Populus euphratica] ref\|XP_011024478.1\| PREDICTED: pre-mRNA-p
gb\|KJB10039.1\|	40	63.5	2e-08	84-620	1-115	+3							769	hypothetical protein B456_001G181500 [Gossypium raimondii]
gb\|EPS68551.1\|	41	63.2	2e-08	333-620	18-115	+3							646	hypothetical protein M569_06212, partial [Genlisea aurea]
ref\|XP_011014970.1\|	42	62.8	4e-08	84-620	1-181	+3							835	PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Populus euphratica]
ref\|XP_011014971.1\|	43	62.8	4e-08	84-620	1-181	+3							834	PREDICTED: pre-mRNA-processing factor 39-like isoform X2 [Populus euphratica]
ref\|XP_010091800.1\|	45	62.8	4e-08	75-620	136-292	+3							934	Pre-mRNA-processing factor 39 [Morus notabilis] gb\|EXB46008.1\| Pre-mRNA-processing factor 39 [Morus notabilis]
ref\|XP_009411386.1\|	44	62.4	4e-08	102-620	7-173	+3							820	PREDICTED: pre-mRNA-processing factor 39 [Musa acuminata subsp. malaccensis]
ref\|XP_006418170.1\|	47	62.0	7e-08	357-620	35-121	+3							764	hypothetical protein EUTSA_v10006844mg [Eutrema salsugineum] gb\|ESQ36523.1\| hypothetical protein EUTSA_v10006844mg [Eutr
ref\|XP_006418169.1\|	48	62.0	7e-08	366-620	38-121	+3							790	hypothetical protein EUTSA_v10006844mg [Eutrema salsugineum] gb\|ESQ36522.1\| hypothetical protein EUTSA_v10006844mg [Eutr
gb\|KDP26468.1\|	49	61.6	8e-08	84-620	1-184	+3							838	hypothetical protein JCGZ_17626 [Jatropha curcas]
gb\|KJB42365.1\|	50	61.6	8e-08	126-620	1-151	+3							798	hypothetical protein B456_007G149700 [Gossypium raimondii] gb\|KJB42366.1\| hypothetical protein B456_007G149700 [Gossypiu
ref\|XP_010262449.1\|	51	61.6	9e-08	459-620	119-172	+3							820	PREDICTED: pre-mRNA-processing factor 39-like isoform X2 [Nelumbo nucifera]
gb\|KJB42362.1\|	52	61.2	1e-07	126-620	1-151	+3							734	hypothetical protein B456_007G149700 [Gossypium raimondii]
emb\|CAN60862.1\|	53	61.2	1e-07	84-620	1-200	+3							826	hypothetical protein VITISV_027789 [Vitis vinifera]
ref\|XP_006443740.1\|	54	60.1	2e-07	84-620	1-177	+3							828	hypothetical protein CICLE_v10018866mg [Citrus clementina] ref\|XP_006443742.1\| hypothetical protein CICLE_v10018866mg [C
ref\|XP_010934229.1\|	55	60.1	2e-07	84-620	1-180	+3							833	PREDICTED: pre-mRNA-processing factor 39-like [Elaeis guineensis]
ref\|XP_006443741.1\|	56	60.1	3e-07	84-620	1-177	+3							829	hypothetical protein CICLE_v10018866mg [Citrus clementina] ref\|XP_006479443.1\| PREDICTED: pre-mRNA-processing factor 39-
ref\|XP_008801264.1\|	57	60.1	3e-07	423-620	110-174	+3							824	PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 39-like [Phoenix dactylifera]
emb\|CBI37183.3\|	46	59.7	5e-08	336-620	2-101	+3							190	unnamed protein product [Vitis vinifera]
emb\|CDY15486.1\|	58	59.7	3e-07	378-620	19-98	+3							807	BnaA08g27700D [Brassica napus]
ref\|XP_010684876.1\|	59	59.7	3e-07	84-620	1-164	+3							815	PREDICTED: pre-mRNA-processing factor 39 [Beta vulgaris subsp. vulgaris]
ref\|XP_008785146.1\|	60	59.7	3e-07	84-620	1-180	+3							829	PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Phoenix dactylifera] ref\|XP_008785147.1\| PREDICTED: pre-mRNA-proce
ref\|XP_009111127.1\|	61	59.7	3e-07	378-620	19-98	+3							748	PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Brassica rapa]
emb\|CDX86653.1\|	62	59.7	4e-07	378-620	44-124	+3							833	BnaC08g00500D [Brassica napus]
ref\|XP_007162595.1\|	63	59.3	4e-07	405-620	112-182	+3							828	hypothetical protein PHAVU_001G164500g [Phaseolus vulgaris] gb\|ESW34589.1\| hypothetical protein PHAVU_001G164500g [Phase
ref\|XP_010475046.1\|	64	58.9	7e-07	423-620	43-107	+3							766	PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Camelina sativa]
ref\|XP_010475049.1\|	65	58.5	8e-07	423-620	43-107	+3							821	PREDICTED: pre-mRNA-processing factor 39-like isoform X3 [Camelina sativa]
gb\|KJB10038.1\|	66	58.5	8e-07	429-620	51-116	+3							770	hypothetical protein B456_001G181500 [Gossypium raimondii] gb\|KJB10041.1\| hypothetical protein B456_001G181500 [Gossypiu
ref\|XP_003521310.1\|	67	58.5	9e-07	393-620	105-179	+3							828	PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Glycine max]
gb\|KJB10035.1\|	68	58.5	9e-07	429-620	51-116	+3							761	hypothetical protein B456_001G181500 [Gossypium raimondii]
gb\|KJB10036.1\|	69	58.2	9e-07	429-620	51-116	+3							601	hypothetical protein B456_001G181500 [Gossypium raimondii]
ref\|XP_006576959.1\|	70	58.2	1e-06	393-620	105-180	+3							829	PREDICTED: pre-mRNA-processing factor 39-like isoform X2 [Glycine max]
ref\|XP_010036157.1\|	71	57.4	2e-06	84-620	1-171	+3							882	PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Eucalyptus grandis]
ref\|XP_010036158.1\|	72	57.4	2e-06	345-620	20-112	+3							823	PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Eucalyptus grandis] ref\|XP_010036159.1\| PREDICTED: pre-mRNA-proces
ref\|XP_010264873.1\|	73	57.0	3e-06	402-620	113-186	+3							835	PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Nelumbo nucifera]
ref\|XP_010264871.1\|	74	57.0	3e-06	402-620	113-186	+3							836	PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Nelumbo nucifera] ref\|XP_010264872.1\| PREDICTED: pre-mRNA-processi
ref\|XP_010036161.1\|	75	57.0	3e-06	84-620	1-171	+3							819	PREDICTED: pre-mRNA-processing factor 39 isoform X3 [Eucalyptus grandis] gb\|KCW47692.1\| hypothetical protein EUGRSUZ_K0
ref\|XP_008645441.1\|	76	57.0	3e-06	393-620	47-122	+3							769	PREDICTED: uncharacterized protein LOC100383763 isoform X1 [Zea mays]
gb\|KHN10777.1\|	77	56.6	4e-06	393-620	105-179	+3							850	Pre-mRNA-processing factor 39 [Glycine soja]
gb\|KJB42361.1\|	79	55.8	6e-06	474-620	64-114	+3							761	hypothetical protein B456_007G149700 [Gossypium raimondii] gb\|KJB42364.1\| hypothetical protein B456_007G149700 [Gossypiu
gb\|ACJ86238.1\|	80	55.1	8e-06	84-620	1-175	+3							332	unknown [Medicago truncatula]
ref\|XP_008459958.1\|	81	55.1	1e-05	84-620	1-180	+3							831	PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Cucumis melo]
ref\|XP_008459959.1\|	82	55.1	1e-05	84-620	1-180	+3							830	PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Cucumis melo]
ref\|XP_006651161.1\|	83	55.1	1e-05	426-620	9-72	+3							722	PREDICTED: pre-mRNA-processing factor 39-like [Oryza brachyantha]
ref\|XP_003553509.1\|	84	55.1	1e-05	393-620	105-179	+3							828	PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Glycine max]
gb\|KHN02469.1\|	85	54.7	1e-05	393-620	105-179	+3							850	Pre-mRNA-processing factor 39 [Glycine soja]
gb\|KDO60359.1\|	86	54.7	1e-05	369-620	27-103	+3							510	hypothetical protein CISIN_1g0010601mg, partial [Citrus sinensis]
ref\|XP_006604511.1\|	87	54.7	2e-05	393-620	105-180	+3							829	PREDICTED: pre-mRNA-processing factor 39-like isoform X2 [Glycine max]
gb\|AES81591.2\|	88	54.3	2e-05	84-620	1-175	+3							826	Pre-mRNA-processing factor 39 [Medicago truncatula]
ref\|XP_008785148.1\|	89	53.9	2e-05	426-620	1-64	+3							713	PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Phoenix dactylifera]
ref\|XP_004140574.1\|	90	53.9	2e-05	84-620	1-180	+3							831	PREDICTED: pre-mRNA-processing factor 39-like [Cucumis sativus] ref\|XP_004157584.1\| PREDICTED: pre-mRNA-processing facto
ref\|XP_010483024.1\|	91	53.9	3e-05	426-620	50-113	+3							770	PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Camelina sativa] ref\|XP_010483033.1\| PREDICTED: pre-mRNA-proc
ref\|XP_010264874.1\|	92	53.9	3e-05	402-620	113-185	+3							835	PREDICTED: pre-mRNA-processing factor 39 isoform X3 [Nelumbo nucifera]
ref\|XP_010483050.1\|	93	53.9	3e-05	426-620	50-113	+3							825	PREDICTED: pre-mRNA-processing factor 39-like isoform X3 [Camelina sativa]
ref\|XP_010556865.1\|	94	53.9	3e-05	369-620	49-131	+3							781	PREDICTED: pre-mRNA-processing factor 39-like [Tarenaya hassleriana]
gb\|KHG10043.1\|	78	53.5	4e-06	492-620	54-100	+3							131	putative cytosolic iron-sulfur assembly protein 1 [Gossypium arboreum]
ref\|NP_563700.1\|	95	53.1	6e-05	456-620	50-106	+3							768	pre-mRNA-processing factor 39 [Arabidopsis thaliana] gb\|AAL07170.1\| unknown protein [Arabidopsis thaliana] gb\|AAM14126.
ref\|NP_001184905.1\|	96	52.8	6e-05	456-620	50-106	+3							823	pre-mRNA-processing factor 39 [Arabidopsis thaliana] gb\|AEE27654.1\| pre-mRNA-processing factor 39 [Arabidopsis thaliana
emb\|CDY18203.1\|	97	52.8	7e-05	417-620	37-103	+3							795	BnaC05g02260D [Brassica napus]
gb\|AAC16751.1\|	98	52.4	1e-04	456-620	50-106	+3							1345	Contains similarity to pre-mRNA processing protein PRP39 gb\|L29224 from S. cerevisiae. ESTs gb\|R64908 and gb\|T88158, gb
ref\|XP_006304405.1\|	99	52.0	1e-04	426-620	50-112	+3							826	hypothetical protein CARUB_v10010956mg [Capsella rubella] gb\|EOA37303.1\| hypothetical protein CARUB_v10010956mg [Capsell
ref\|XP_009119334.1\|	100	51.6	2e-04	417-620	37-103	+3							748	PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Brassica rapa]
ref\|XP_006403157.1\|	101	51.2	2e-04	369-620	48-126	+3							767	hypothetical protein EUTSA_v10003154mg [Eutrema salsugineum] gb\|ESQ44610.1\| hypothetical protein EUTSA_v10003154mg [Eutr
ref\|XP_008658757.1\|	102	51.2	2e-04	279-620	9-121	+3							763	PREDICTED: uncharacterized protein LOC100304428 isoform X1 [Zea mays] ref\|XP_008658758.1\| PREDICTED: uncharacterized pr
gb\|AEF01213.1\|	103	50.8	3e-04	84-620	1-174	+3							823	PRP39 [x Doritaenopsis hybrid cultivar]
ref\|XP_003625373.1\|	104	50.8	3e-04	390-620	99-169	+3							838	Pre-mRNA-processing factor [Medicago truncatula]
ref\|XP_003558524.1\|	105	50.4	5e-04	390-620	1-75	+3							724	PREDICTED: pre-mRNA-processing factor 39 [Brachypodium distachyon]
emb\|CDX89846.1\|	106	50.1	5e-04	417-620	33-96	+3							780	BnaA10g02360D [Brassica napus]
ref\|XP_008459960.1\|	107	50.1	5e-04	474-620	73-123	+3							774	PREDICTED: pre-mRNA-processing factor 39 isoform X3 [Cucumis melo] ref\|XP_008459961.1\| PREDICTED: pre-mRNA-processing f
ref\|XP_002465661.1\|	108	50.1	6e-04	393-620	47-121	+3							768	hypothetical protein SORBIDRAFT_01g043300 [Sorghum bicolor] gb\|EER92659.1\| hypothetical protein SORBIDRAFT_01g043300 [So
gb\|KDO60360.1\|	109	49.7	7e-04										512	hypothetical protein CISIN_1g0010601mg, partial [Citrus sinensis]