Clone JMFS069F06 [sequences]

contigF:012792 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
ref|XP_004232589.1|11768e-481-474470-617+1617PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Solanum lycopersicum]
ref|XP_009777634.1|31724e-461-474472-619+1619PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 isoform X1 [Nicotiana sylvestris]
ref|XP_009777635.1|21713e-461-474422-569+1569PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 isoform X2 [Nicotiana sylvestris] ref|XP_0097
ref|XP_009618724.1|41696e-451-474541-690+1690PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Nicotiana tomentosiformis]
ref|XP_009619796.1|61688e-451-474472-620+1620PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Nicotiana tomentosiformis] r
ref|XP_009619798.1|51677e-451-474422-570+1570PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Nicotiana tomentosiformis]
ref|XP_010649342.1|71531e-391-474474-627+1627PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Vitis vinifera]
ref|XP_006364840.1|81523e-391-474470-618+1618PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Solanum tuberosum]
ref|XP_011087416.1|91486e-381-474470-626+1626PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Sesamum indicum]
ref|XP_009773556.1|111479e-371-474652-801+1801PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Nicotiana sylvestris]
ref|XP_010272854.1|101464e-371-474477-631+1631PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Nelumbo nucifera] ref|XP_010272855.1| P
ref|XP_010272853.1|121443e-361-474477-631+1631PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Nelumbo nucifera]
emb|CBI37506.3|131421e-351-474474-607+1607unnamed protein product [Vitis vinifera]
emb|CDP01757.1|141383e-341-474472-637+1637unnamed protein product [Coffea canephora]
gb|KCW53303.1|161379e-344-474451-609+1609hypothetical protein EUGRSUZ_J02557 [Eucalyptus grandis]
gb|KCW53301.1|171371e-334-474476-634+1634hypothetical protein EUGRSUZ_J02557 [Eucalyptus grandis]
ref|XP_010033606.1|181371e-334-474475-633+1633PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Eucalyptus grandis] gb|KCW53302.1| hypotheti
ref|XP_006483466.1|201361e-334-474478-628+1628PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Citrus sinensis]
ref|XP_006483467.1|191351e-334-474385-535+1535PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Citrus sinensis]
gb|KDO67466.1|151345e-344-474142-292+1292hypothetical protein CISIN_1g0074032mg, partial [Citrus sinensis]
ref|XP_006483560.1|231346e-334-474385-535+1535PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3-like isoform X2 [Citrus sinensis]
ref|XP_006483559.1|241347e-334-474478-628+1628PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3-like isoform X1 [Citrus sinensis]
gb|KDO67298.1|211322e-334-474142-292+1292hypothetical protein CISIN_1g0416052mg, partial [Citrus sinensis]
ref|XP_006483734.1|221323e-334-474165-315+1315PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Citrus sinensis]
ref|XP_006467185.1|261318e-324-459438-581+1588PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Citrus sinensis]
gb|KDP41755.1|271265e-301-474476-628+1628hypothetical protein JCGZ_26773 [Jatropha curcas]
gb|EYU37427.1|281241e-291-474387-541+1541hypothetical protein MIMGU_mgv1a004171mg [Erythranthe guttata]
ref|XP_010674318.1|301243e-291-474484-634+1634PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Beta vulgaris subsp. vulgaris]
gb|KJB18645.1|311223e-281-474469-629+1629hypothetical protein B456_003G064600 [Gossypium raimondii] gb|KJB18646.1| hypothetical protein B456_003G064600 [Gossypiu
ref|XP_008438040.1|321186e-271-474473-625+1625PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo] ref|XP_008438041.1| PREDICTED:
ref|XP_004287706.1|331186e-2785-474500-628+1628PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Fragaria vesca subsp. vesca]
ref|XP_010088711.1|351179e-274-474473-616+1616hypothetical protein L484_016497 [Morus notabilis] gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]
ref|XP_002307198.2|361171e-264-474488-637+1637RNA polymerase 1 specific transcription initiation factor RRN3 family protein [Populus trichocarpa] gb|EEE94194.2| RNA
ref|XP_007204094.1|371162e-264-474471-622+1622hypothetical protein PRUPE_ppa002914mg [Prunus persica] gb|EMJ05293.1| hypothetical protein PRUPE_ppa002914mg [Prunus pe
ref|XP_007134114.1|381163e-264-474474-620+1620hypothetical protein PHAVU_010G020100g [Phaseolus vulgaris] gb|ESW06108.1| hypothetical protein PHAVU_010G020100g [Phase
ref|XP_004508346.1|391163e-261-453475-620+1620PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Cicer arietinum] ref|XP_0045
ref|XP_008392869.1|401154e-2679-474430-555+1555PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Malus domestica]
ref|XP_002524432.1|411154e-261-474488-640+1640transcription initiation factor ia, putative [Ricinus communis] gb|EEF37967.1| transcription initiation factor ia, putat
ref|XP_008354575.1|421155e-2679-474502-627+1627PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Malus domestica]
ref|XP_009369775.1|431155e-2679-474502-627+1627PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Pyrus x bretschneideri]
ref|XP_004155826.1|441157e-261-459473-618+1625PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Cucumis sativus]
ref|XP_004966189.1|451141e-254-459499-638+1644PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Setaria italica]
ref|XP_011022128.1|461141e-254-474488-637+1637PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3 [Populus euphratica]
ref|XP_008242108.1|471142e-254-474471-622+1622PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Prunus mume]
ref|NP_001140484.1|341129e-274-46247-190+1195uncharacterized protein LOC100272544 [Zea mays] gb|ACF83926.1| unknown [Zea mays]
gb|AFW69235.1|481128e-254-459444-586+1592hypothetical protein ZEAMMB73_457339 [Zea mays]
ref|XP_004133864.1|491129e-251-459473-619+1626PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Cucumis sativus] gb|KGN56512.1| hypothe
ref|XP_008681385.1|501121e-244-459472-614+1620PREDICTED: uncharacterized protein LOC100272544 isoform X1 [Zea mays] gb|AFW69236.1| hypothetical protein ZEAMMB73_4573
ref|XP_007204151.1|511102e-244-474416-569+1569hypothetical protein PRUPE_ppa019726mg [Prunus persica] gb|EMJ05350.1| hypothetical protein PRUPE_ppa019726mg [Prunus pe
ref|XP_004966190.1|531103e-244-459473-612+1618PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Setaria italica]
ref|XP_003547884.1|541104e-244-474474-627+1627PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Glycine max] ref|XP_00659925
gb|EMT22842.1|561098e-244-459446-590+1604hypothetical protein F775_01666 [Aegilops tauschii]
ref|XP_002881355.1|571081e-234-474476-614+1614RNA polymerase I specific transcription initiation factor RRN3 family protein [Arabidopsis lyrata subsp. lyrata] gb|EFH
ref|XP_006656405.1|581082e-231-459473-616+1622PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Oryza brachyantha]
gb|ACJ85821.1|551075e-241-456139-283+1292unknown [Medicago truncatula]
ref|XP_006656406.1|591072e-231-459448-591+1597PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Oryza brachyantha]
ref|XP_002437492.1|601072e-234-459445-587+1593hypothetical protein SORBIDRAFT_10g028030 [Sorghum bicolor] gb|EER88859.1| hypothetical protein SORBIDRAFT_10g028030 [So
ref|XP_006296428.1|641074e-234-474471-608+1608hypothetical protein CARUB_v10025608mg [Capsella rubella] gb|EOA29326.1| hypothetical protein CARUB_v10025608mg [Capsell
ref|XP_003534228.1|651075e-234-474474-628+1628PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Glycine max]
gb|KHN03116.1|521062e-244-47459-214+1214RNA polymerase I-specific transcription initiation factor RRN3 [Glycine soja]
ref|XP_010913887.1|631063e-231-459380-517+1523PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X3 [Elaeis guineensis]
ref|NP_174347.1|661066e-234-459464-594+1604RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AEE31247.1| RNA polyme
ref|XP_010913886.1|671066e-231-459459-596+1602PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Elaeis guineensis]
gb|AAD25746.1|AC007060_4681067e-234-459482-612+1622EST gb|Z37678 comes from this gene [Arabidopsis thaliana]
gb|AAC16259.1|691067e-234-474466-602+1602unknown protein [Arabidopsis thaliana]
gb|KHN38852.1|701068e-234-474474-628+1628RNA polymerase I-specific transcription initiation factor RRN3 [Glycine soja]
ref|XP_010913884.1|711068e-231-459483-620+1626PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Elaeis guineensis] ref|XP_01
ref|NP_850236.1|721068e-234-474477-613+1613RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AAM20140.1| unknown pr
dbj|BAF01881.1|611053e-234-474274-410+1410hypothetical protein [Arabidopsis thaliana]
ref|XP_003563455.1|741044e-224-459473-616+1622PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Brachypodium distachyon]
ref|XP_010227381.1|751036e-224-459389-532+1538PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Brachypodium distachyon]
gb|EMS63005.1|761031e-214-459413-556+1571hypothetical protein TRIUR3_02342 [Triticum urartu]
dbj|BAD45609.1|731023e-221-459142-285+1291RNA polymerase I specific transcription initiation factor RRN3-like [Oryza sativa Japonica Group] dbj|BAD46065.1| RNA p
ref|XP_010928803.1|771021e-211-459459-604+1610PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Elaeis guineensis]
ref|NP_001058413.2|791022e-211-459473-616+1622Os06g0688100 [Oryza sativa Japonica Group] dbj|BAD45608.1| putative RNA polymerase I transcription factor RRN3 [Oryza sa
gb|EEC81212.1|801022e-211-459473-616+1622hypothetical protein OsI_24246 [Oryza sativa Indica Group]
ref|XP_010928802.1|811022e-211-459483-628+1634PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Elaeis guineensis]
ref|XP_008782843.1|781012e-211-459315-460+1466PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Phoenix dactylifera]
ref|XP_010540653.1|821013e-214-459473-608+1614PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Tarenaya hassleriana]
ref|XP_008782841.1|831015e-211-459419-564+1570PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Phoenix dactylifera]
ref|XP_006415449.1|841007e-214-459473-604+1614hypothetical protein EUTSA_v10007103mg [Eutrema salsugineum] gb|ESQ33802.1| hypothetical protein EUTSA_v10007103mg [Eutr
emb|CDY43658.1|8699.03e-204-459467-598+1605BnaA04g20330D [Brassica napus]
ref|XP_006410626.1|8798.65e-204-474477-616+1616hypothetical protein EUTSA_v10016395mg [Eutrema salsugineum] gb|ESQ52079.1| hypothetical protein EUTSA_v10016395mg [Eutr
ref|XP_009391870.1|8898.65e-201-459481-626+1632PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Musa acuminata subsp. malaccensis] ref|
ref|XP_010516632.1|8997.89e-204-474477-615+1615PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Camelina sativa] ref|XP_010516633.1| PR
ref|XP_002893635.1|9097.11e-194-459470-600+1610predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH69894.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
ref|XP_009411620.1|9196.72e-191-459482-623+1629PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Musa acuminata subsp. malaccensis]
ref|XP_010504951.1|9296.72e-194-474478-616+1616PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Camelina sativa] ref|XP_010504952.1| PR
ref|XP_008805454.1|9396.33e-191-459483-620+1626PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Phoenix dactylifera]
gb|KDO71565.1|8595.91e-204-32149-146+1184hypothetical protein CISIN_1g0157611mg, partial [Citrus sinensis] gb|KDO71566.1| hypothetical protein CISIN_1g0157611mg,
ref|XP_009141397.1|9495.94e-194-459459-590+1597PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Brassica rapa]
ref|XP_010509710.1|9594.71e-184-474476-613+1613PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Camelina sativa] ref|XP_010509711.1| PR
ref|XP_009133000.1|9694.41e-184-474466-605+1605PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Brassica rapa]
emb|CDX84629.1|9794.41e-184-474474-613+1613BnaA03g16010D [Brassica napus]
emb|CDX79576.1|9894.02e-184-474470-608+1608BnaC03g19120D [Brassica napus]
gb|KFK44868.1|9990.92e-174-459470-600+1608hypothetical protein AALP_AA1G312900 [Arabis alpina]
ref|XP_008242159.1|10087.43e-164-402373-498+1701PREDICTED: LOW QUALITY PROTEIN: RNA polymerase I-specific transcription initiation factor rrn3-like, partial [Prunus mu
ref|XP_010460864.1|10182.41e-144-459466-601+1611PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2 [Camelina sativa]
ref|XP_006307098.1|10280.94e-144-459451-570+1581hypothetical protein CARUB_v10008684mg [Capsella rubella] gb|EOA39996.1| hypothetical protein CARUB_v10008684mg [Capsell
emb|CDY71933.1|10379.05e-144-459219-340+1348BnaCnng75170D, partial [Brassica napus]
ref|XP_009143744.1|10478.62e-134-474465-597+1597PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Brassica rapa]
emb|CDY31637.1|10577.07e-134-459451-576+1583BnaA05g09100D [Brassica napus]
emb|CDX84284.1|10770.98e-114-459472-593+1600BnaC04g10460D [Brassica napus]
gb|KHF98889.1|10870.51e-101-171469-523+1523RNA polymerase I-specific transcription initiation factor RRN3 [Gossypium arboreum]
ref|XP_010519059.1|10967.01e-094-276465-554+1561PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Tarenaya hassleriana]
gb|KDO71567.1|10666.67e-114-17449-103+1109hypothetical protein CISIN_1g0157611mg, partial [Citrus sinensis]
ref|XP_010552505.1|11066.62e-094-276454-543+1550PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Tarenaya hassleriana]
ref|XP_002967968.1|11166.62e-091-402498-626+1637hypothetical protein SELMODRAFT_440149 [Selaginella moellendorffii] gb|EFJ31315.1| hypothetical protein SELMODRAFT_44014
ref|XP_001775034.1|11365.55e-0985-207486-526+1655predicted protein [Physcomitrella patens] gb|EDQ60141.1| predicted protein [Physcomitrella patens]
ref|XP_006293892.1|11464.78e-094-465464-581+1585hypothetical protein CARUB_v10022885mg [Capsella rubella] gb|EOA26790.1| hypothetical protein CARUB_v10022885mg [Capsell
ref|XP_001771048.1|11564.31e-08100-504457-618+1624predicted protein [Physcomitrella patens] gb|EDQ64203.1| predicted protein [Physcomitrella patens]
ref|XP_002963952.1|11664.31e-081-402498-624+1635hypothetical protein SELMODRAFT_405493 [Selaginella moellendorffii] gb|EFJ34285.1| hypothetical protein SELMODRAFT_40549
gb|KDO67467.1|11263.92e-091-174141-196+1202hypothetical protein CISIN_1g0074032mg, partial [Citrus sinensis]
ref|XP_010478481.1|11762.06e-084-459464-587+1597PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3-like [Camelina sativa] ref|XP_010478483.1| PR
ref|XP_006483561.1|11861.29e-084-171478-531+1534PREDICTED: RNA polymerase I-specific transcription initiation factor rrn3-like isoform X3 [Citrus sinensis]
ref|XP_006849976.1|12055.86e-061-177503-559+1563hypothetical protein AMTR_s00022p00154500 [Amborella trichopoda] gb|ERN11557.1| hypothetical protein AMTR_s00022p0015450
gb|AAC28984.1|12155.87e-064-459421-537+1545unknown protein [Arabidopsis thaliana]
ref|NP_181457.2|12255.87e-064-459449-565+1573RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|ABE65893.1| RNA polyme
ref|XP_006450295.1|11953.52e-06202-4741-87+187hypothetical protein CICLE_v10010647mg [Citrus clementina] gb|ESR63535.1| hypothetical protein CICLE_v10010647mg [Citrus
ref|XP_010460863.1|12453.54e-054-189466-525+1538PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Camelina sativa]
ref|XP_002880116.1|12352.04e-0582-234107-170+1182hypothetical protein ARALYDRAFT_903869 [Arabidopsis lyrata subsp. lyrata] gb|EFH56375.1| hypothetical protein ARALYDRAF
ref|XP_003291243.1|12550.17e-04112-264573-627+1691hypothetical protein DICPUDRAFT_81920 [Dictyostelium purpureum] gb|EGC32245.1| hypothetical protein DICPUDRAFT_81920 [Di
ref|XP_009523651.1|12649.78e-0494-225608-651+1786hypothetical protein PHYSODRAFT_328981 [Phytophthora sojae] gb|EGZ20934.1| hypothetical protein PHYSODRAFT_328981 [Phyto
ref|NP_001034610.1|12749.30.001656RNA polymerase I-specific transcription initiation factor RRN3 [Mus musculus] sp|B2RS91.1|RRN3_MOUSE RecName: Full=RNA
ref|XP_009359751.1|253132517PREDICTED: uncharacterized protein LOC103950283 [Pyrus x bretschneideri]
ref|XP_007046443.1|291124628Major facilitator superfamily protein isoform 1 [Theobroma cacao] ref|XP_007046444.1| Major facilitator superfamily prot
gb|KEH32234.1|62e107635transcription initiation factor ia protein, putative [Medicago truncatula]