Clone JMFS019F04 [sequences]

contigF:010476 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
ref|XP_006357639.1|182.81e-14416-5621-49+21120PREDICTED: phytochrome C-like isoform X1 [Solanum tuberosum]
emb|CBI28442.3|272.42e-11416-5621-48+2915unnamed protein product [Vitis vinifera]
gb|ACC60967.1|372.42e-11416-5621-48+21118phytochrome C [Vitis vinifera]
ref|XP_002268724.1|472.42e-11416-5621-48+21118PREDICTED: phytochrome C [Vitis vinifera] ref|XP_010657472.1| PREDICTED: phytochrome C [Vitis vinifera]
gb|ACC60971.1|572.42e-11416-5621-48+21123phytochrome C [Vitis riparia]
ref|XP_010038320.1|670.98e-11416-5621-48+21128PREDICTED: phytochrome C [Eucalyptus grandis] gb|KCW50143.1| hypothetical protein EUGRSUZ_K03574 [Eucalyptus grandis]
ref|XP_009594664.1|770.99e-11416-5621-49+21121PREDICTED: phytochrome C [Nicotiana tomentosiformis]
gb|KHG15745.1|869.72e-10416-5621-48+21123Phytochrome C [Gossypium arboreum]
ref|XP_009778074.1|969.33e-10416-5621-49+21121PREDICTED: phytochrome C [Nicotiana sylvestris]
emb|CDP19108.1|1068.65e-10416-5621-49+21077unnamed protein product [Coffea canephora]
gb|EYU43181.1|1167.89e-10416-5621-49+21123hypothetical protein MIMGU_mgv1a000489mg [Erythranthe guttata]
ref|XP_007049357.1|1267.41e-09416-5621-48+21052Phytochrome C isoform 4 [Theobroma cacao] gb|EOX93514.1| Phytochrome C isoform 4 [Theobroma cacao]
ref|XP_007049354.1|1367.41e-09416-5621-48+21123Phytochrome C isoform 1 [Theobroma cacao] ref|XP_007049356.1| Phytochrome C isoform 1 [Theobroma cacao] gb|EOX93511.1| P
ref|XP_007049355.1|1467.41e-09416-5621-48+21083Phytochrome C isoform 2, partial [Theobroma cacao] gb|EOX93512.1| Phytochrome C isoform 2, partial [Theobroma cacao]
gb|KJB42733.1|1567.41e-09416-5621-48+21003hypothetical protein B456_007G166300 [Gossypium raimondii]
gb|KJB42735.1|1667.41e-09416-5621-48+21083hypothetical protein B456_007G166300 [Gossypium raimondii]
gb|KJB42732.1|1767.41e-09416-5621-48+21123hypothetical protein B456_007G166300 [Gossypium raimondii] gb|KJB42734.1| hypothetical protein B456_007G166300 [Gossypiu
ref|XP_010270220.1|1866.62e-09413-5623-50+21126PREDICTED: phytochrome C [Nelumbo nucifera] ref|XP_010270221.1| PREDICTED: phytochrome C [Nelumbo nucifera]
ref|XP_004981744.1|1962.83e-08416-5621-49+21135PREDICTED: LOW QUALITY PROTEIN: phytochrome C-like [Setaria italica]
gb|ABF98917.1|2062.44e-08416-5621-49+2957Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
gb|EAY91883.1|2162.44e-08416-5621-49+2888hypothetical protein OsI_13531 [Oryza sativa Indica Group]
gb|AAF66603.1|AF141942_12262.44e-08416-5621-49+21137phytochrome C [Oryza sativa Indica Group]
ref|NP_001051296.1|2362.44e-08416-5621-49+21137Os03g0752100 [Oryza sativa Japonica Group] sp|Q10CQ8.1|PHYC_ORYSJ RecName: Full=Phytochrome C [Oryza sativa Japonica Gro
sp|A2XM23.2|PHYC_ORYSI2462.44e-08416-5621-49+21137RecName: Full=Phytochrome C [Oryza sativa Indica Group]
ref|XP_008781008.1|2562.05e-08416-5621-47+21126PREDICTED: phytochrome C isoform X1 [Phoenix dactylifera] ref|XP_008781009.1| PREDICTED: phytochrome C isoform X1 [Phoen
ref|XP_006650597.1|2661.67e-08416-5621-49+21137PREDICTED: phytochrome C-like [Oryza brachyantha]
ref|NP_001131622.1|2761.21e-07416-5621-48+21135phytochromeC2 [Zea mays] gb|AAP06791.1| phytochrome C2 apoprotein [Zea mays] gb|AFW67607.1| phytochromeC2 [Zea mays]
ref|XP_008665426.1|2860.81e-07440-5628-48+21135PREDICTED: phytochrome C [Zea mays] gb|AAP06790.1| phytochrome C1 apoprotein [Zea mays] tpg|DAA51409.1| TPA: phytochrome
ref|XP_003559446.1|2960.12e-07416-5621-49+21140PREDICTED: phytochrome C [Brachypodium distachyon]
ref|XP_010323894.1|3059.73e-07416-5621-49+21118PREDICTED: phytochrome C isoform X1 [Solanum lycopersicum] gb|AAC49301.2| phytochrome F [Solanum lycopersicum]
ref|XP_010323895.1|3159.73e-07416-5621-49+21074PREDICTED: phytochrome C isoform X2 [Solanum lycopersicum]
gb|AIC83441.1|3259.34e-07416-5621-49+21139phytochrome C [Triticum turgidum subsp. durum]
gb|AAU06214.1|3359.34e-07416-5621-49+21139phytochrome C [Triticum aestivum]
gb|EMS54134.1|3459.34e-07416-5621-49+21139Phytochrome C [Triticum urartu]
gb|AAU06213.1|3559.34e-07416-5621-49+21139phytochrome C [Triticum aestivum]
emb|CAC82798.2|3659.34e-07416-5621-49+21139phytochrome C [Triticum aestivum]
gb|AAU06209.1|3759.34e-07416-5621-49+21139phytochrome C [Triticum spelta]
gb|AAU06210.1|3859.34e-07416-5621-49+21139phytochrome C [Triticum aestivum] gb|AAU06211.1| phytochrome C [Triticum aestivum] gb|AIC83440.1| phytochrome C [Triticu
gb|AAU06212.1|3959.34e-07416-5621-49+21139phytochrome C [Triticum aestivum]
ref|XP_004162889.1|4058.57e-07416-5621-48+21119PREDICTED: LOW QUALITY PROTEIN: phytochrome C-like [Cucumis sativus]
ref|XP_010252757.1|4158.57e-07416-5621-46+21123PREDICTED: phytochrome C-like [Nelumbo nucifera]
ref|XP_004144620.1|4258.57e-07416-5621-48+21119PREDICTED: phytochrome C-like [Cucumis sativus] gb|KGN43411.1| hypothetical protein Csa_7G031720 [Cucumis sativus]
dbj|BAP91203.1|4358.58e-07416-5621-49+21139phytochrome C CDS [Hordeum bulbosum]
gb|AAU06208.1|4458.58e-07416-5621-49+21139phytochrome C [Triticum aestivum] gb|AAU06215.1| phytochrome C [Triticum aestivum]
dbj|BAP76064.1|4558.29e-07452-5629-45+21117putative PHYN2 [Cryptomeria japonica]
ref|XP_008229917.1|4658.29e-07440-5628-48+21122PREDICTED: phytochrome C isoform X1 [Prunus mume] ref|XP_008229918.1| PREDICTED: phytochrome C isoform X1 [Prunus mume]
ref|XP_008229921.1|4758.29e-07440-5628-48+21078PREDICTED: phytochrome C isoform X2 [Prunus mume]
ref|XP_008462070.1|4857.81e-06416-5621-48+21119PREDICTED: phytochrome C [Cucumis melo]
ref|XP_007217142.1|4957.42e-06440-5628-48+21122hypothetical protein PRUPE_ppa000506mg [Prunus persica] gb|EMJ18341.1| hypothetical protein PRUPE_ppa000506mg [Prunus pe
ref|XP_010247866.1|5057.02e-06440-5625-45+21132PREDICTED: phytochrome A [Nelumbo nucifera]
gb|ACV87353.1|5156.63e-06440-5625-45+21130phytochrome A [Aquilegia formosa]
ref|XP_011085404.1|5255.18e-06416-5622-50+21120PREDICTED: phytochrome C [Sesamum indicum] ref|XP_011085405.1| PREDICTED: phytochrome C [Sesamum indicum]
gb|KDO41032.1|5354.71e-05416-5621-46+2681hypothetical protein CISIN_1g001215mg [Citrus sinensis]
gb|AAR08427.1|5454.32e-05440-5625-45+21130phytochrome A [Monotropastrum globosum]
ref|XP_008246343.1|5554.32e-05458-56211-45+21124PREDICTED: phytochrome A [Prunus mume]
ref|XP_007204957.1|5653.92e-05458-56211-45+21055hypothetical protein PRUPE_ppa000643mg [Prunus persica] gb|EMJ06156.1| hypothetical protein PRUPE_ppa000643mg [Prunus pe
ref|XP_009769439.1|5753.92e-05467-56214-45+21124PREDICTED: phytochrome A1 [Nicotiana sylvestris] ref|XP_009769440.1| PREDICTED: phytochrome A1 [Nicotiana sylvestris]
sp|P33530.1|PHYA1_TOBAC5853.92e-05467-56214-45+21124RecName: Full=Phytochrome A1 [Nicotiana tabacum] emb|CAA47284.1| type-A phytochrome [Nicotiana tabacum]
ref|XP_009622127.1|5953.92e-05467-56214-45+21123PREDICTED: phytochrome A1 [Nicotiana tomentosiformis] ref|XP_009622128.1| PREDICTED: phytochrome A1 [Nicotiana tomentosi
gb|AHZ63962.1|6053.14e-05467-56216-47+21120phytochrome [Podocarpus rubens]
emb|CDY50896.1|6153.14e-05440-56242-82+21161BnaCnng19880D [Brassica napus]
gb|AHZ63971.1|6253.14e-05434-5623-46+21121phytochrome [Encephalartos barteri]
gb|AIE77637.1|6352.84e-05458-56215-49+2655phytochrome C, partial [Hordeum vulgare]
gb|AIE77640.1|6452.84e-05458-56215-49+2655phytochrome C, partial [Hordeum vulgare]
gb|AIE77639.1|6552.84e-05458-56215-49+2655phytochrome C, partial [Hordeum vulgare]
gb|AIE77634.1|6652.84e-05458-56215-49+2655phytochrome C, partial [Hordeum vulgare]
gb|AIE77633.1|6752.84e-05458-56215-49+2655phytochrome C, partial [Hordeum vulgare]
gb|AIE77629.1|6852.84e-05458-56215-49+2655phytochrome C, partial [Hordeum vulgare]
gb|AIE77626.1|6952.85e-05458-56215-49+2655phytochrome C, partial [Hordeum vulgare] gb|AIE77627.1| phytochrome C, partial [Hordeum vulgare] gb|AIE77628.1| phytochr
gb|AIE77638.1|7052.85e-05458-56215-49+2655phytochrome C, partial [Hordeum vulgare]
gb|AIE77630.1|7152.85e-05458-56215-49+2655phytochrome C, partial [Hordeum vulgare]
gb|KDO41033.1|7252.85e-05416-5621-46+2953hypothetical protein CISIN_1g001215mg [Citrus sinensis]
gb|AIE77635.1|7352.85e-05458-56215-49+2655phytochrome C, partial [Hordeum vulgare]
gb|AIE77631.1|7452.85e-05458-56215-49+2655phytochrome C, partial [Hordeum vulgare]
gb|KDO41031.1|7552.85e-05416-5621-46+21122hypothetical protein CISIN_1g001215mg [Citrus sinensis]
ref|XP_006447805.1|7652.85e-05416-5621-46+21122hypothetical protein CICLE_v10014096mg [Citrus clementina] ref|XP_006469461.1| PREDICTED: phytochrome C-like [Citrus sin
dbj|BAJ98141.1|7752.85e-05458-56215-49+21147predicted protein [Hordeum vulgare subsp. vulgare] dbj|BAN91998.1| phytochrome C [Hordeum vulgare subsp. vulgare]
gb|ABB77851.1|7852.85e-05458-56215-49+21147phytochrome C [Hordeum vulgare subsp. vulgare] dbj|BAN91999.1| phytochrome C [Hordeum vulgare subsp. vulgare]
gb|ABB13326.1|7952.85e-05458-56215-49+21139phytochrome C [Hordeum vulgare subsp. vulgare]
gb|ABB13327.1|8052.85e-05458-56215-49+21139phytochrome C [Hordeum vulgare subsp. vulgare]
ref|XP_010458244.1|8152.85e-05440-5625-45+21122PREDICTED: phytochrome A [Camelina sativa] ref|XP_010458246.1| PREDICTED: phytochrome A [Camelina sativa] ref|XP_0104582
dbj|BAA99409.1|8252.85e-05440-5625-45+21122phytochrome A [Armoracia rusticana]
dbj|BAA99408.1|8352.85e-05440-5625-45+21122phytochrome A [Armoracia rusticana]
ref|XP_006306617.1|8452.85e-05440-5625-45+21122hypothetical protein CARUB_v10008141mg [Capsella rubella] gb|EOA39515.1| hypothetical protein CARUB_v10008141mg [Capsell
dbj|BAH79235.1|8552.85e-05440-5625-45+21122phytochrome A, partial [Cardamine nipponica]
dbj|BAH79238.1|8652.86e-05440-5625-45+21122phytochrome A, partial [Cardamine nipponica]
dbj|BAH79237.1|8752.86e-05440-5625-45+21122phytochrome A, partial [Cardamine nipponica]
ref|XP_006417561.1|8852.86e-05440-5625-45+21122hypothetical protein EUTSA_v10006625mg [Eutrema salsugineum] ref|XP_006417562.1| hypothetical protein EUTSA_v10006625mg
dbj|BAH79243.1|8952.86e-05440-5625-45+21122phytochrome A, partial [Cardamine resedifolia]
dbj|BAH79236.1|9052.86e-05440-5625-45+21122phytochrome A, partial [Cardamine nipponica]
gb|AHM26382.1|9152.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
dbj|BAA99410.1|9252.86e-05440-5625-45+21122phytochrome A [Armoracia rusticana]
ref|XP_010490131.1|9352.86e-05440-5625-45+21122PREDICTED: phytochrome A-like [Camelina sativa] ref|XP_010490133.1| PREDICTED: phytochrome A-like [Camelina sativa] ref|
emb|CAA35221.1|9452.86e-05440-5625-45+21122unnamed protein product [Arabidopsis thaliana]
gb|AHM26385.1|9552.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26381.1|9652.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26380.1|9752.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26373.1|9852.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea] gb|AHM26374.1| light-labil
gb|AHM26372.1|9952.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26369.1|10052.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26347.1|10152.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea] gb|AHM26349.1| light-labil
emb|CDX93501.1|10252.86e-05440-56284-124+21202BnaA06g05470D [Brassica napus]
gb|AHM26386.1|10352.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26384.1|10452.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26379.1|10552.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26376.1|10652.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26375.1|10752.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26371.1|10852.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26370.1|10952.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26368.1|11052.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea] gb|AHM26383.1| light-labil
gb|AHM26367.1|11152.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26359.1|11252.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26356.1|11352.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea] gb|AHM26357.1| light-labil
gb|AHM26351.1|11452.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea]
gb|AHM26348.1|11552.86e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea] gb|AHM26354.1| light-labil
ref|XP_002892510.1|11652.86e-05440-5625-45+21122hypothetical protein ARALYDRAFT_471053 [Arabidopsis lyrata subsp. lyrata] gb|EFH68769.1| hypothetical protein ARALYDRAF
ref|NP_172428.1|11752.86e-05440-5625-45+21122phytochrome A [Arabidopsis thaliana] sp|P14712.2|PHYA_ARATH RecName: Full=Phytochrome A; AltName: Full=Protein ELONGATED
gb|AHM26352.1|11852.46e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea] gb|AHM26362.1| light-labil
gb|AHM26377.1|11952.47e-05440-5625-45+21122light-labile cytoplasmic red/far-red light photoreceptor [Arabidopsis lyrata subsp. petraea] gb|AHM26378.1| light-labil
gb|AAO86645.1|12052.08e-05452-5629-45+21122PHYA4 photoreceptor [Stellaria longipes]
sp|P93673.1|PHYA_LATSA12152.08e-05434-5623-45+21124RecName: Full=Phytochrome type A [Lathyrus sativus] gb|AAB47994.1| phytochrome type A [Lathyrus sativus]
gb|AAO86644.1|12252.09e-05452-5629-45+21123PHYA3 photoreceptor [Stellaria longipes]
gb|AHZ63967.1|12352.09e-05440-5625-45+21120phytochrome [Encephalartos barteri]
gb|KJB82600.1|12452.09e-05467-56214-45+21122hypothetical protein B456_013G203900 [Gossypium raimondii]
gb|AAO86643.1|12552.01e-04458-56211-45+2935PHYA2 photoreceptor [Stellaria longipes]
gb|KHG03686.1|12652.01e-04458-56211-45+21122Phytochrome A -like protein [Gossypium arboreum]
gb|EYU35379.1|12751.61e-04452-5629-46+21129hypothetical protein MIMGU_mgv1a000476mg [Erythranthe guttata]
ref|XP_009148254.1|12851.61e-04440-5625-45+21123PREDICTED: phytochrome A [Brassica rapa]
ref|XP_009337858.1|12951.61e-04461-56212-45+21123PREDICTED: phytochrome A-like [Pyrus x bretschneideri]
dbj|BAH79241.1|13051.22e-04440-5625-45+21122phytochrome A, partial [Cardamine nipponica]
dbj|BAH79239.1|13151.22e-04440-5625-45+21122phytochrome A, partial [Cardamine nipponica] dbj|BAH79240.1| phytochrome A, partial [Cardamine nipponica] dbj|BAH79242.1
gb|AGT50253.1|13250.82e-04476-56217-45+21127phytochrome A1 [Ipomoea batatas]
gb|EYU19354.1|13350.82e-04452-5629-45+21125hypothetical protein MIMGU_mgv1a000485mg [Erythranthe guttata]
gb|AJA72481.1|13450.82e-04476-56217-45+21127phytochrome A [Ipomoea purpurea]
gb|AGT50255.1|13550.82e-04476-56217-45+21127phytochrome A3 [Ipomoea batatas]
gb|AGT50254.1|13650.82e-04476-56217-45+21127phytochrome A2 [Ipomoea batatas]
ref|XP_006856271.1|13750.82e-04476-56219-47+2580hypothetical protein AMTR_s00047p00076620 [Amborella trichopoda] gb|ERN17738.1| hypothetical protein AMTR_s00047p0007662
gb|AAR08425.1|13850.82e-04476-56217-45+21119phytochrome A [Cuscuta pentagona]
ref|XP_010914825.1|13950.43e-04440-5625-45+21128PREDICTED: phytochrome A isoform X1 [Elaeis guineensis] ref|XP_010914826.1| PREDICTED: phytochrome A isoform X1 [Elaeis
ref|XP_010914830.1|14050.43e-04440-5625-45+21122PREDICTED: phytochrome A isoform X2 [Elaeis guineensis]
gb|AAQ11871.1|14150.43e-04452-5629-45+21122phytochrome A1 [Stellaria longipes]
gb|KFK43262.1|14250.14e-04440-5625-45+21122phytochrome a [Arabis alpina]
gb|KDO56363.1|14350.14e-04461-56212-45+21052hypothetical protein CISIN_1g001235mg [Citrus sinensis]
gb|KDO56362.1|14450.14e-04461-56212-45+21117hypothetical protein CISIN_1g001235mg [Citrus sinensis]
ref|XP_006423945.1|14550.14e-04461-56212-45+21117hypothetical protein CICLE_v10027712mg [Citrus clementina] ref|XP_006480323.1| PREDICTED: phytochrome A-like [Citrus sin
ref|NP_001234490.1|14650.14e-04476-56217-45+21123alternative transcript type 3 [Solanum lycopersicum] ref|XP_010327391.1| PREDICTED: alternative transcript type 3 isofor
ref|XP_010549119.1|14749.75e-04458-56211-45+21124PREDICTED: phytochrome A-like [Tarenaya hassleriana] ref|XP_010549127.1| PREDICTED: phytochrome A-like [Tarenaya hassler
dbj|BAM67032.1|14849.75e-04440-5625-45+21121phytochrome a [Chrysanthemum seticuspe f. boreale]
ref|XP_010906221.1|14949.76e-04416-5621-47+21128PREDICTED: phytochrome C [Elaeis guineensis] ref|XP_010906222.1| PREDICTED: phytochrome C [Elaeis guineensis]
sp|P30733.2|PHYA_SOLTU15049.76e-04476-56217-45+21123RecName: Full=Phytochrome A [Solanum tuberosum] gb|AAB21533.2| type A phytochrome [Solanum tuberosum]
gb|AHZ63964.1|15149.36e-04440-5625-45+21118phytochrome [Pinus parviflora]
ref|NP_001275384.1|15249.36e-04476-56217-45+21123phytochrome A [Solanum tuberosum] gb|ABA46868.1| phytochrome A [Solanum tuberosum]
ref|XP_006339917.1|15349.37e-041123PREDICTED: type A phytochrome [Solanum tuberosum]