Clone JMFN031A04 [sequences]

contigF:000314 contigR:

name	5'-sequence						3'-sequence						length	description
name	rank	score	Evalue	region1	region2	frame	rank	score	Evalue	region1	region2	frame	length	description
gb\|AAK51235.1\|AF287471_1	1	121	1e-27	164-589	417-560	+2							1453	polyprotein [Arabidopsis thaliana]
gb\|AAC67200.1\|	2	115	1e-25	164-589	424-567	+2							1402	putative retroelement pol polyprotein [Arabidopsis thaliana]
emb\|CAC37623.1\|	3	112	9e-25	164-580	416-556	+2							1466	copia-like polyprotein [Arabidopsis thaliana]
gb\|AAD21687.1\|	4	112	1e-24	164-583	414-555	+2							1415	Strong similarity to gi\|3600044 T12H20.12 protease homolog from Arabidopsis thaliana BAC gb\|AF080119 and is a member of
emb\|CAN77680.1\|	5	110	2e-24	164-586	389-532	+2							590	hypothetical protein VITISV_040762 [Vitis vinifera]
emb\|CAN69367.1\|	6	108	2e-23	164-577	332-487	+2							1083	hypothetical protein VITISV_035520 [Vitis vinifera]
emb\|CAN81355.1\|	7	107	5e-23	164-577	434-582	+2							1402	hypothetical protein VITISV_039158 [Vitis vinifera]
emb\|CAN73071.1\|	8	107	7e-23	161-589	385-532	+2							1239	hypothetical protein VITISV_032383 [Vitis vinifera]
emb\|CAN77295.1\|	9	105	3e-22	164-577	332-491	+2							1198	hypothetical protein VITISV_005638 [Vitis vinifera]
emb\|CAN62182.1\|	10	104	4e-22	167-571	253-400	+2							920	hypothetical protein VITISV_044400 [Vitis vinifera]
emb\|CAN64418.1\|	11	104	6e-22	164-586	281-424	+2							1429	hypothetical protein VITISV_030041 [Vitis vinifera]
emb\|CAN61322.1\|	13	104	7e-22	164-577	437-587	+2							1432	hypothetical protein VITISV_012106 [Vitis vinifera]
gb\|AAC35532.1\|	14	103	8e-22	164-589	419-561	+2							1392	contains similarity to proteases [Arabidopsis thaliana]
emb\|CAB40035.1\|	15	103	9e-22	164-589	416-558	+2							1515	retrotransposon like protein [Arabidopsis thaliana] emb\|CAB81170.1\| retrotransposon like protein [Arabidopsis thaliana]
gb\|KFL89552.1\|	16	103	9e-22	164-589	504-662	+2							1375	hypothetical protein AmDm5_1575 [Acetobacter malorum]
emb\|CAB43904.1\|	18	103	2e-21	164-589	385-527	+2							1415	putative protein [Arabidopsis thaliana] emb\|CAB81478.1\| putative protein [Arabidopsis thaliana]
gb\|AAF02855.1\|AC009324_4	19	102	4e-21	164-589	418-561	+2							1522	Similar to retrotransposon proteins [Arabidopsis thaliana]
emb\|CAN71996.1\|	20	102	4e-21	164-577	243-393	+2							1087	hypothetical protein VITISV_023485 [Vitis vinifera]
gb\|AAC61290.1\|	21	101	5e-21	164-583	406-547	+2							1149	putative retroelement pol polyprotein [Arabidopsis thaliana]
emb\|CAN78022.1\|	22	101	9e-21	161-589	377-510	+2							1501	hypothetical protein VITISV_015518 [Vitis vinifera]
emb\|CBI36090.3\|	23	100	1e-20	164-589	962-1108	+2							1273	unnamed protein product [Vitis vinifera]
emb\|CCH50966.1\|	24	100	1e-20	164-589	683-834	+2							1670	T4.5 [Malus x robusta]
gb\|ABG00000.1\|	25	100	2e-20	164-589	1373-1517	+2							2074	retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
emb\|CAN69607.1\|	27	99.4	3e-20	173-589	351-494	+2							1207	hypothetical protein VITISV_009561 [Vitis vinifera]
emb\|CAN66496.1\|	28	99.4	3e-20	164-589	292-438	+2							1092	hypothetical protein VITISV_036886 [Vitis vinifera]
emb\|CAN76151.1\|	30	98.6	5e-20	164-583	206-354	+2							979	hypothetical protein VITISV_012673 [Vitis vinifera]
ref\|XP_007014689.1\|	31	97.8	6e-20	164-589	133-279	+2							678	Uncharacterized protein TCM_040047 [Theobroma cacao] gb\|EOY32308.1\| Uncharacterized protein TCM_040047 [Theobroma cacao]
gb\|AAU10682.1\|	33	97.8	1e-19	164-589	407-550	+2							1210	putative polyprotein [Oryza sativa Japonica Group]
emb\|CAN82859.1\|	38	97.1	2e-19	164-586	353-498	+2							1578	hypothetical protein VITISV_025377 [Vitis vinifera]
gb\|ACP30598.1\|	39	96.7	3e-19	164-589	423-565	+2							2301	disease resistance protein [Brassica rapa subsp. pekinensis]
emb\|CAN62447.1\|	40	96.3	3e-19	179-586	374-515	+2							1144	hypothetical protein VITISV_024007 [Vitis vinifera]
ref\|XP_008385010.1\|	46	95.9	5e-19	164-583	924-1071	+2							1099	PREDICTED: cation/H(+) antiporter 15-like [Malus domestica]
dbj\|BAK41512.1\|	47	95.9	5e-19	164-586	418-562	+2							1048	C-end truncated polyprotein [Arabidopsis thaliana]
dbj\|BAA87949.1\|	45	95.5	5e-19	164-586	388-532	+2							847	retrotransposon homolog, partial [Arabidopsis thaliana]
dbj\|BAK41511.1\|	48	95.5	6e-19	164-586	423-567	+2							1466	polyprotein [Arabidopsis thaliana]
gb\|AAK62793.1\|AC027036_14	49	95.5	6e-19	164-586	423-567	+2							1466	polyprotein, putative [Arabidopsis thaliana] dbj\|BAK41510.1\| polyprotein [Arabidopsis thaliana]
gb\|AAK62788.1\|AC027036_9	50	95.5	7e-19	164-586	423-567	+2							1466	polyprotein, putative [Arabidopsis thaliana] dbj\|BAB84015.1\| polyprotein [Arabidopsis thaliana]
dbj\|BAA78423.1\|	51	95.5	8e-19	164-586	388-532	+2							1431	polyprotein [Arabidopsis thaliana]
gb\|AAR88589.1\|	52	95.1	1e-18	164-589	380-521	+2							1399	putative copia-like retrotransposon protein [Oryza sativa Japonica Group]
emb\|CAB10380.1\|	57	94.4	2e-18	164-589	365-488	+2							1942	reverse transcriptase like protein [Arabidopsis thaliana] emb\|CAB78643.1\| reverse transcriptase like protein [Arabidopsi
emb\|CAN69706.1\|	41	94.0	4e-19	164-586	267-412	+2							431	hypothetical protein VITISV_037595 [Vitis vinifera]
emb\|CAN78447.1\|	58	94.0	2e-18	164-589	413-561	+2							1171	hypothetical protein VITISV_026810 [Vitis vinifera]
emb\|CAN81099.1\|	59	94.0	3e-18	164-586	463-624	+2							1455	hypothetical protein VITISV_017741 [Vitis vinifera]
emb\|CAN68489.1\|	63	93.6	3e-18	164-577	470-618	+2							1449	hypothetical protein VITISV_037543 [Vitis vinifera]
emb\|CAN67970.1\|	62	93.2	3e-18	164-589	342-493	+2							1023	hypothetical protein VITISV_025093 [Vitis vinifera]
gb\|AAK09230.1\|AC084320_17	64	92.8	5e-18	164-589	406-547	+2							1219	putative copia-like retrotransposon Hopscotch polyprotein [Oryza sativa Japonica Group] gb\|AAK72882.1\|AC091123_1 putati
dbj\|BAM44532.1\|	66	92.8	6e-18	164-586	421-565	+2							1421	polyprotein [Arabidopsis thaliana]
dbj\|BAA78424.1\|	67	92.8	6e-18	164-586	276-420	+2							1330	polyprotein [Arabidopsis thaliana] dbj\|BAM44533.1\| polyprotein [Arabidopsis thaliana]
dbj\|BAM42650.1\|	68	92.8	6e-18	164-586	421-565	+2							1475	Polyprotein [Arabidopsis thaliana]
dbj\|BAM42649.1\|	69	92.8	6e-18	164-586	421-565	+2							1475	Polyprotein [Arabidopsis thaliana]
dbj\|BAA78426.1\|	70	92.8	7e-18	164-586	421-565	+2							1475	polyprotein [Arabidopsis thaliana]
gb\|ABA95367.1\|	65	92.4	5e-18	164-589	383-522	+2							807	retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
dbj\|BAM42646.1\|	71	92.4	7e-18	164-586	421-565	+2							1475	polyprotein [Arabidopsis thaliana]
gb\|AAC79110.1\|	72	92.4	7e-18	164-586	402-546	+2							1456	putative polyprotein of LTR transposon [Arabidopsis thaliana] emb\|CAB77781.1\| putative polyprotein of LTR transposon [Ar
dbj\|BAM42647.1\|	73	92.4	7e-18	164-586	421-565	+2							1475	polyprotein [Arabidopsis thaliana] dbj\|BAM42648.1\| polyprotein [Arabidopsis thaliana]
emb\|CAN82380.1\|	74	92.0	8e-18	164-586	341-484	+2							828	hypothetical protein VITISV_021579 [Vitis vinifera]
emb\|CAN66898.1\|	79	91.7	1e-17	173-589	341-480	+2							1183	hypothetical protein VITISV_037436 [Vitis vinifera]
dbj\|BAM44529.1\|	80	91.7	1e-17	164-586	421-565	+2							1421	polyprotein [Arabidopsis thaliana]
dbj\|BAM44530.1\|	81	91.7	1e-17	164-586	421-565	+2							1421	polyprotein [Arabidopsis thaliana]
dbj\|BAA78427.1\|	82	91.7	1e-17	164-586	421-565	+2							1421	polyprotein [Arabidopsis thaliana]
dbj\|BAM44531.1\|	83	91.7	1e-17	164-586	421-565	+2							1421	polyprotein [Arabidopsis thaliana]
emb\|CAN74695.1\|	84	91.7	2e-17	164-589	448-608	+2							1424	hypothetical protein VITISV_024648 [Vitis vinifera]
emb\|CAN62533.1\|	78	91.3	1e-17	191-586	258-389	+2							731	hypothetical protein VITISV_030700 [Vitis vinifera]
emb\|CAN77529.1\|	86	91.3	2e-17	170-586	323-467	+2							1047	hypothetical protein VITISV_041425 [Vitis vinifera]
emb\|CAN79884.1\|	87	91.3	2e-17	164-589	368-514	+2							1453	hypothetical protein VITISV_002539 [Vitis vinifera]
dbj\|BAM44535.1\|	88	91.3	2e-17	164-586	421-565	+2							1475	polyprotein [Arabidopsis thaliana]
dbj\|BAM44534.1\|	89	91.3	2e-17	164-586	421-565	+2							1475	polyprotein [Arabidopsis thaliana]
gb\|AAU43956.1\|	90	91.3	2e-17	161-586	410-558	+2							1447	unknown protein [Oryza sativa Japonica Group] gb\|AAU44069.1\| putative polyprotein [Oryza sativa Japonica Group]
dbj\|BAG98101.1\|	77	90.9	1e-17	161-589	359-501	+2							572	unnamed protein product [Oryza sativa Japonica Group]
emb\|CAN82221.1\|	92	90.9	2e-17	164-577	122-270	+2							1007	hypothetical protein VITISV_015226 [Vitis vinifera]
emb\|CAN67247.1\|	93	90.9	2e-17	170-577	329-470	+2							1270	hypothetical protein VITISV_008682 [Vitis vinifera]
dbj\|BAK41507.1\|	94	90.9	2e-17	164-586	404-548	+2							1447	polyprotein [Arabidopsis thaliana]
dbj\|BAA78425.1\|	95	90.9	3e-17	164-586	404-548	+2							1447	polyprotein [Arabidopsis thaliana] dbj\|BAK41505.1\| polyprotein [Arabidopsis thaliana] dbj\|BAK41506.1\| polyprotein [Arabi
emb\|CAN71267.1\|	96	90.9	3e-17	164-589	588-739	+2							1576	hypothetical protein VITISV_017889 [Vitis vinifera]
gb\|EEE57553.1\|	76	90.5	1e-17	164-589	287-428	+2							499	hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
emb\|CAN74624.1\|	98	90.5	3e-17	173-589	378-517	+2							1250	hypothetical protein VITISV_024822 [Vitis vinifera]
gb\|AAK43485.1\|AC084807_10	99	90.5	3e-17	164-586	429-573	+2							1459	polyprotein, putative [Arabidopsis thaliana] dbj\|BAH30336.1\| hypothetical protein [Arabidopsis thaliana]
emb\|CAN71109.1\|	100	90.5	3e-17	173-589	350-489	+2							1246	hypothetical protein VITISV_001479 [Vitis vinifera]
emb\|CAN62181.1\|	101	90.5	3e-17	188-589	383-517	+2							1264	hypothetical protein VITISV_044399 [Vitis vinifera]
emb\|CAN69340.1\|	103	90.5	4e-17	188-589	383-517	+2							1298	hypothetical protein VITISV_032634 [Vitis vinifera]
ref\|XP_008374275.1\|	97	90.1	3e-17	164-589	129-274	+2							740	PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Malus domestica]
emb\|CAN74794.1\|	102	90.1	3e-17	164-589	423-574	+2							845	hypothetical protein VITISV_041689 [Vitis vinifera]
emb\|CAN65867.1\|	104	90.1	4e-17	173-589	332-471	+2							1137	hypothetical protein VITISV_034935 [Vitis vinifera]
emb\|CAN69851.1\|	105	90.1	5e-17	290-577	406-504	+2							1282	hypothetical protein VITISV_009554 [Vitis vinifera]
emb\|CAN61548.1\|	106	90.1	5e-17	173-589	645-784	+2							1535	hypothetical protein VITISV_043524 [Vitis vinifera]
emb\|CAN79492.1\|	108	90.1	5e-17	164-589	1208-1359	+2							2116	hypothetical protein VITISV_033373 [Vitis vinifera]
emb\|CAN61272.1\|	109	89.7	6e-17	173-589	710-849	+2							1643	hypothetical protein VITISV_039063 [Vitis vinifera]
emb\|CAN69998.1\|	110	89.7	6e-17	173-589	317-456	+2							1211	hypothetical protein VITISV_006839 [Vitis vinifera]
emb\|CAN71161.1\|	111	89.4	8e-17	173-589	313-452	+2							1141	hypothetical protein VITISV_009113 [Vitis vinifera]
gb\|AEJ07955.1\|	112	89.0	9e-17	161-589	555-695	+2							826	putative polyprotein [Sorghum propinquum]
gb\|ABA97008.1\|	113	89.0	1e-16	164-589	414-555	+2							1202	retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
gb\|AAT07563.1\|	114	89.0	1e-16	164-589	405-546	+2							1431	putative polyprotein [Oryza sativa Japonica Group] gb\|AAT07631.1\| putative polyprotein [Oryza sativa Japonica Group]
emb\|CAN79148.1\|	115	89.0	1e-16	164-577	438-578	+2							1334	hypothetical protein VITISV_004343 [Vitis vinifera]
gb\|AEJ72555.1\|	116	89.0	1e-16	155-586	396-538	+2							1249	putative retroelement polyprotein [Malus domestica]
emb\|CAN62394.1\|	118	89.0	1e-16	164-586	400-549	+2							1287	hypothetical protein VITISV_021305 [Vitis vinifera]
emb\|CAN73924.1\|	119	89.0	1e-16	164-577	438-578	+2							1434	hypothetical protein VITISV_041509 [Vitis vinifera]
emb\|CAN63660.1\|	117	88.6	1e-16	173-589	286-425	+2							1001	hypothetical protein VITISV_008416 [Vitis vinifera]
emb\|CAN72498.1\|	121	88.6	1e-16	164-577	443-586	+2							1394	hypothetical protein VITISV_010513 [Vitis vinifera]
emb\|CAN81130.1\|	122	88.6	1e-16	173-589	378-517	+2							1236	hypothetical protein VITISV_003944 [Vitis vinifera]
emb\|CAN60844.1\|	123	88.6	2e-16	275-577	278-377	+2							1380	hypothetical protein VITISV_005976 [Vitis vinifera]
pir\|\|T02087	124	88.6	2e-16	164-589	415-559	+2							1439	gag/pol polyprotein - maize retrotransposon Hopscotch gb\|AAA57005.1\| copia-like retrotransposon Hopscotch polyprotein [Z
gb\|KFK44388.1\|	127	88.6	2e-16	164-586	438-582	+2							2090	hypothetical protein AALP_AA1G251100, partial [Arabis alpina]
ref\|XP_010526684.1\|	120	88.2	1e-16	137-586	33-192	+2							789	PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X6 [Tarenaya hassleriana]
ref\|XP_010526683.1\|	126	88.2	2e-16	137-586	130-289	+2							886	PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X5 [Tarenaya hassleriana]
emb\|CAN71164.1\|	128	88.2	2e-16	164-589	566-717	+2							1303	hypothetical protein VITISV_031057 [Vitis vinifera]
gb\|AAN04167.1\|	129	87.8	2e-16	164-589	311-452	+2							1042	Putative copia-like retrotransposon polyprotein [Oryza sativa Japonica Group] gb\|AAP53032.1\| retrotransposon protein, p
emb\|CAN60796.1\|	130	87.8	3e-16	173-589	147-286	+2							1186	hypothetical protein VITISV_015834 [Vitis vinifera]
emb\|CAN76896.1\|	131	87.8	3e-16	173-589	347-486	+2							1146	hypothetical protein VITISV_010605 [Vitis vinifera]
emb\|CAN61435.1\|	134	87.4	3e-16	173-589	378-517	+2							1298	hypothetical protein VITISV_033767 [Vitis vinifera]
gb\|AAG13591.2\|AC051633_7	135	87.4	3e-16	161-589	459-599	+2							1417	putative gag/pol polyprotein [Oryza sativa Japonica Group]
gb\|ABA98049.1\|	137	87.4	4e-16	164-589	413-553	+2							1460	retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
gb\|ABB47941.2\|	138	87.4	4e-16	161-589	459-599	+2							1414	retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]
gb\|AAM08751.1\|AC025098_18	139	87.4	4e-16	161-589	459-599	+2							1803	Putative copia-type polyprotein [Oryza sativa Japonica Group]
emb\|CDH30699.1\|	133	87.0	3e-16	164-583	459-610	+2							646	putative Ty1-copia-like retrotransposon [Cercis chinensis]
emb\|CAH67640.1\|	141	87.0	5e-16	164-589	543-687	+2							1825	H0102C09.1 [Oryza sativa Indica Group]
emb\|CAN61630.1\|	142	87.0	5e-16	155-589	347-495	+2							1208	hypothetical protein VITISV_003191 [Vitis vinifera]
emb\|CAN62863.1\|	143	87.0	5e-16	179-586	481-621	+2							1442	hypothetical protein VITISV_030334 [Vitis vinifera]
emb\|CAN78207.1\|	140	86.7	5e-16	233-586	291-410	+2							856	hypothetical protein VITISV_023428 [Vitis vinifera]
emb\|CAN65591.1\|	144	86.7	6e-16	164-589	403-554	+2							1427	hypothetical protein VITISV_042091 [Vitis vinifera]
emb\|CAN83506.1\|	145	86.7	6e-16	164-586	325-465	+2							1172	hypothetical protein VITISV_027576 [Vitis vinifera]
emb\|CAN63196.1\|	146	86.7	7e-16	173-589	378-517	+2							1179	hypothetical protein VITISV_035792 [Vitis vinifera]
gb\|AAT39281.2\|	147	86.7	8e-16	164-586	401-542	+2							1760	Integrase core domain containing protein [Solanum demissum]
emb\|CAN74198.1\|	151	85.9	1e-15	173-589	341-480	+2							1261	hypothetical protein VITISV_005765 [Vitis vinifera]
emb\|CAN76078.1\|	152	85.5	1e-15	179-586	303-441	+2							1146	hypothetical protein VITISV_008973 [Vitis vinifera]
ref\|XP_010526682.1\|	153	85.5	1e-15	164-586	193-343	+2							940	PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X4 [Tarenaya hassleriana]
emb\|CAN79142.1\|	154	85.5	1e-15	164-586	235-384	+2							1293	hypothetical protein VITISV_040460 [Vitis vinifera]
emb\|CAN78464.1\|	156	85.5	2e-15	173-589	255-394	+2							997	hypothetical protein VITISV_025101 [Vitis vinifera]
gb\|AAT85031.1\|	157	85.5	2e-15	164-589	411-557	+2							1437	putative polyprotein [Oryza sativa Japonica Group] gb\|ABF96679.1\| retrotransposon protein, putative, Ty1-copia subclass
ref\|XP_010526681.1\|	159	85.5	2e-15	164-586	528-678	+2							1238	PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X3 [Tarenaya hassleriana]
emb\|CAN65504.1\|	160	85.5	2e-15	173-589	1073-1212	+2							1252	hypothetical protein VITISV_028342 [Vitis vinifera]
ref\|XP_010051209.1\|	164	85.5	2e-15	164-589	490-632	+2							2021	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104439906 [Eucalyptus grandis]
ref\|XP_010526680.1\|	161	85.1	2e-15	164-586	497-647	+2							1244	PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X2 [Tarenaya hassleriana]
ref\|XP_010526678.1\|	162	85.1	2e-15	164-586	528-678	+2							1275	PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X1 [Tarenaya hassleriana]
emb\|CAN74341.1\|	163	85.1	2e-15	173-589	378-517	+2							1269	hypothetical protein VITISV_043997 [Vitis vinifera]
emb\|CAB46043.1\|	166	85.1	2e-15	164-586	424-568	+2							1474	retrotransposon like protein [Arabidopsis thaliana] emb\|CAB80958.1\| retrotransposon like protein [Arabidopsis thaliana]
dbj\|BAB01972.1\|	167	85.1	2e-15	164-586	414-560	+2							1499	copia-like retrotransposable element [Arabidopsis thaliana]
gb\|ACY72569.1\|	168	85.1	2e-15	161-589	413-559	+2							1436	unknown [Oryza sativa Japonica Group]
emb\|CAN68578.1\|	149	84.7	1e-15	191-586	6-143	+2							472	hypothetical protein VITISV_019283 [Vitis vinifera]
emb\|CAN61376.1\|	158	84.7	2e-15	164-583	105-254	+2							675	hypothetical protein VITISV_011846 [Vitis vinifera]
gb\|AAB82754.1\|	170	84.7	3e-15	161-589	412-558	+2							1445	retrofit [Oryza longistaminata]
gb\|ACV42639.1\|	171	84.7	3e-15	161-589	416-562	+2							1448	gag/pol [Oryza sativa Japonica Group]
dbj\|BAB90546.1\|	172	84.7	3e-15	161-589	416-562	+2							1448	putative rice retrotransposon retrofit gag/pol polyprotein [Oryza sativa Japonica Group]
sp\|P10978.1\|POLX_TOBAC	174	84.7	3e-15	173-589	386-526	+2							1328	RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Includes: RecName: Full=Protease; Includes:
gb\|ABW81031.1\|	175	84.3	3e-15	161-586	453-596	+2							1296	LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
emb\|CAN67587.1\|	177	84.3	4e-15	164-589	405-556	+2							1034	hypothetical protein VITISV_036279 [Vitis vinifera]
gb\|ACL97386.1\|	178	84.3	4e-15	236-589	410-526	+2							1305	Gag-Pol polyprotein [Medicago truncatula]
emb\|CAN67882.1\|	179	84.3	4e-15	173-589	378-517	+2							1299	hypothetical protein VITISV_022356 [Vitis vinifera]
emb\|CAE05450.3\|	182	84.0	4e-15	164-532	402-527	+2							1131	OSJNBa0073E02.10 [Oryza sativa Japonica Group]
emb\|CDY24759.1\|	184	84.0	5e-15	167-586	305-442	+2							1271	BnaC04g13640D [Brassica napus]
gb\|AAD25646.1\|	185	84.0	5e-15	113-586	518-669	+2							1461	putative retroelement pol polyprotein [Arabidopsis thaliana]
emb\|CAH67225.1\|	186	84.0	5e-15	164-547	402-532	+2							1087	OSIGBa0145M07.7 [Oryza sativa Indica Group]
gb\|AAT93988.1\|	187	84.0	5e-15	161-589	448-589	+2							1480	putative polyprotein [Oryza sativa Japonica Group]
gb\|AAO23093.1\|	180	83.6	4e-15	161-589	441-582	+2							594	putative polyprotein [Oryza sativa Japonica Group] gb\|ABF96843.1\| retrotransposon protein, putative, Ty1-copia subclass
ref\|XP_008674202.1\|	181	83.6	4e-15	251-586	66-177	+2							756	PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X2 [Zea mays]
gb\|ACB45089.1\|	188	83.6	6e-15	164-589	219-365	+2							849	putative polyprotein [Solanum habrochaites]
gb\|ACL97387.1\|	190	83.6	6e-15	185-589	388-526	+2							1305	Gag-Pol polyprotein [Lotus japonicus]
gb\|AAD24600.1\|	191	83.6	6e-15	164-586	351-491	+2							1333	putative retroelement pol polyprotein [Arabidopsis thaliana]
ref\|XP_008647645.1\|	192	83.6	7e-15	251-586	249-360	+2							1180	PREDICTED: uncharacterized protein LOC100502300 isoform X2 [Zea mays]
ref\|XP_007015087.1\|	176	83.2	3e-15	155-583	255-404	+2							460	Uncharacterized protein TCM_040733 [Theobroma cacao] gb\|EOY32706.1\| Uncharacterized protein TCM_040733 [Theobroma cacao]
dbj\|BAB10743.1\|	193	83.2	8e-15	164-586	251-391	+2							1109	retroelement pol polyprotein-like [Arabidopsis thaliana]
emb\|CAA18107.1\|	197	83.2	9e-15	164-586	251-391	+2							1109	LTR retrotransposon like protein [Arabidopsis thaliana] emb\|CAB79159.1\| LTR retrotransposon like protein [Arabidopsis th
ref\|XP_008674201.1\|	199	83.2	9e-15	251-586	733-844	+2							1376	PREDICTED: uncharacterized protein LOC100279087 isoform X1 [Zea mays]
emb\|CAN67539.1\|	201	83.2	9e-15	191-589	516-658	+2							1652	hypothetical protein VITISV_021584 [Vitis vinifera]
gb\|ACL97385.1\|	204	83.2	1e-14	236-589	410-526	+2							1305	Gag-Pol polyprotein [Medicago truncatula]
ref\|XP_008356829.1\|	205	83.2	1e-14	164-589	956-1102	+2							1390	PREDICTED: cation/H(+) antiporter 15-like [Malus domestica]
emb\|CAN77868.1\|	194	82.8	8e-15	281-589	74-177	+2							662	hypothetical protein VITISV_001383 [Vitis vinifera]
emb\|CAN69334.1\|	200	82.8	9e-15	233-586	317-437	+2							923	hypothetical protein VITISV_003274 [Vitis vinifera]
emb\|CAN80320.1\|	206	82.8	1e-14	170-586	345-492	+2							1261	hypothetical protein VITISV_034560 [Vitis vinifera]
emb\|CAN83352.1\|	207	82.8	1e-14	245-586	346-459	+2							1087	hypothetical protein VITISV_022160 [Vitis vinifera]
emb\|CAN61929.1\|	208	82.8	1e-14	164-586	425-574	+2							1271	hypothetical protein VITISV_014855 [Vitis vinifera]
gb\|ACL97384.1\|	210	82.8	1e-14	236-589	410-526	+2							1305	Gag-Pol polyprotein [Medicago truncatula]
emb\|CAN79936.1\|	211	82.8	1e-14	281-589	195-298	+2							981	hypothetical protein VITISV_033548 [Vitis vinifera]
emb\|CAN62498.1\|	217	82.4	2e-14	173-589	254-393	+2							1054	hypothetical protein VITISV_000081 [Vitis vinifera]
gb\|KHN21230.1\|	218	82.4	2e-14	284-586	514-614	+2							1429	Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Glycine soja]
gb\|AAD26943.1\|	220	82.4	2e-14	161-586	518-658	+2							1454	putative retroelement pol polyprotein [Arabidopsis thaliana]
emb\|CAN70361.1\|	221	82.0	2e-14	191-586	133-273	+2							1013	hypothetical protein VITISV_033646 [Vitis vinifera]
emb\|CAN75041.1\|	222	82.0	2e-14	164-586	425-582	+2							1381	hypothetical protein VITISV_027174 [Vitis vinifera]
gb\|ACL97383.1\|	224	82.0	2e-14	236-589	410-526	+2							1305	Gag-Pol polyprotein [Medicago truncatula]
ref\|XP_008801814.1\|	216	81.6	1e-14	104-589	302-466	+2							487	PREDICTED: phosphoglucan phosphatase LSF1, chloroplastic isoform X2 [Phoenix dactylifera]
gb\|KHN17953.1\|	226	81.6	3e-14	164-586	341-478	+2							1294	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja]
emb\|CAJ09951.2\|	227	81.6	3e-14	188-577	390-523	+2							1334	putative gag-pol polyprotein [Citrus sinensis]
emb\|CAN65235.1\|	228	81.6	3e-14	251-589	10-123	+2							1379	hypothetical protein VITISV_040876 [Vitis vinifera]
ref\|XP_008675247.1\|	229	81.6	3e-14	161-589	562-700	+2							1371	PREDICTED: uncharacterized protein LOC103651388 isoform X1 [Zea mays]
emb\|CAN74984.1\|	230	81.6	3e-14	164-586	1551-1700	+2							2408	hypothetical protein VITISV_035210 [Vitis vinifera]
gb\|ACS74199.1\|	231	81.3	3e-14	176-589	356-498	+2							1297	putative gag-pol polyprotein [Fragaria x ananassa]
gb\|KHN30958.1\|	232	81.3	4e-14	164-586	330-467	+2							1237	Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Glycine soja]
gb\|KHN45997.1\|	233	81.3	4e-14	164-586	328-465	+2							1235	Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Glycine soja]
emb\|CAN74381.1\|	234	81.3	4e-14	188-589	386-507	+2							1884	hypothetical protein VITISV_007944 [Vitis vinifera]
emb\|CDY58610.1\|	238	80.9	5e-14	164-586	204-348	+2							856	BnaCnng33390D [Brassica napus]
emb\|CAN74964.1\|	243	80.9	5e-14	167-589	380-516	+2							1248	hypothetical protein VITISV_006810 [Vitis vinifera]
emb\|CAN83290.1\|	240	80.5	5e-14	164-586	326-476	+2							723	hypothetical protein VITISV_018945 [Vitis vinifera]
ref\|XP_008654354.1\|	242	80.5	5e-14	251-586	284-395	+2							721	PREDICTED: uncharacterized protein LOC100193261 isoform X3 [Zea mays]
ref\|XP_008654352.1\|	244	80.5	5e-14	251-586	324-435	+2							761	PREDICTED: uncharacterized protein LOC100193261 isoform X1 [Zea mays]
ref\|XP_008654353.1\|	246	80.5	6e-14	251-586	288-399	+2							725	PREDICTED: uncharacterized protein LOC100193261 isoform X2 [Zea mays]
gb\|EEC82022.1\|	247	80.5	6e-14	161-589	658-796	+2							964	hypothetical protein OsI_25984 [Oryza sativa Indica Group]
ref\|XP_008651726.1\|	248	80.5	6e-14	251-586	58-169	+2							989	PREDICTED: hypothetical protein isoform X1 [Zea mays]
dbj\|BAB10503.1\|	249	80.5	7e-14	164-586	534-686	+2							1475	retroelement pol polyprotein-like [Arabidopsis thaliana]
gb\|AAG50751.1\|AC079733_19	250	80.5	8e-14										1468	polyprotein, putative [Arabidopsis thaliana]
emb\|CAN65849.1\|	241	80.1	5e-14	188-589	244-366	+2							541	hypothetical protein VITISV_038148 [Vitis vinifera]
ref\|XP_008672007.1\|	203	79.7	1e-14	251-586	110-221	+2							257	PREDICTED: uncharacterized protein LOC100191195 isoform X3 [Zea mays]
ref\|XP_008350396.1\|	53	9	94.7										800	PREDICTED: uncharacterized protein LOC103413729 [Malus domestica]
ref\|XP_008385533.1\|	55	9	93.6										852	PREDICTED: uncharacterized protein LOC103448069 [Malus domestica]
ref\|XP_008364216.1\|	60	9	93.2										917	PREDICTED: uncharacterized protein LOC103427909 [Malus domestica]
ref\|XP_008344799.1\|	155	9	85.5										1107	PREDICTED: uncharacterized protein LOC103407689 [Malus domestica]
ref\|XP_008358376.1\|	198	9	83.2										1261	PREDICTED: uncharacterized protein LOC103422119 [Malus domestica]
ref\|XP_008391036.1\|	12	8	103										633	PREDICTED: uncharacterized protein LOC103453268 [Malus domestica]
ref\|XP_008384570.1\|	34	8	97.4										808	PREDICTED: uncharacterized protein LOC103447138 [Malus domestica]
ref\|XP_008376319.1\|	35	8	97.8										1217	PREDICTED: uncharacterized protein LOC103439538 [Malus domestica]
ref\|XP_009359763.1\|	136	8	86.7										688	PREDICTED: uncharacterized protein LOC103950298 [Pyrus x bretschneideri]
ref\|XP_010507647.1\|	165	8	84.7										921	PREDICTED: uncharacterized protein LOC104784298 [Camelina sativa]
ref\|XP_008678499.1\|	214	8	82.4										887	PREDICTED: uncharacterized protein LOC103653348 [Zea mays]
ref\|XP_008345130.1\|	223	8	82.0										1355	PREDICTED: uncharacterized protein LOC103408038 [Malus domestica]
ref\|XP_008450155.1\|	225	8	80.9										536	PREDICTED: uncharacterized protein LOC103491828 [Cucumis melo]
ref\|XP_008351324.1\|	61	7	93.6										1269	PREDICTED: uncharacterized protein LOC103414737 [Malus domestica]
ref\|XP_008386987.1\|	150	7	86.3										1615	PREDICTED: uncharacterized protein LOC103449447 [Malus domestica]
ref\|XP_008674070.1\|	209	7	82.8										997	PREDICTED: uncharacterized protein LOC103650237 [Zea mays]
ref\|XP_008664109.1\|	215	7	82.4										945	PREDICTED: uncharacterized protein LOC103642667, partial [Zea mays]
ref\|XP_008357951.1\|	237	7	81.3										1409	PREDICTED: uncharacterized protein LOC103421687 [Malus domestica]
ref\|XP_008349809.1\|	37	6	96.7										954	PREDICTED: uncharacterized protein LOC103413096 [Malus domestica]
ref\|XP_008385055.1\|	56	6	93.6										727	PREDICTED: uncharacterized protein LOC103447646 [Malus domestica]
ref\|XP_008347011.1\|	173	6	84.7										1293	PREDICTED: uncharacterized protein LOC103410016 [Malus domestica]
ref\|XP_008367623.1\|	91	5	90.9										1110	PREDICTED: uncharacterized protein LOC103431265 [Malus domestica]
ref\|XP_008389560.1\|	132	5	87.8										1300	PREDICTED: uncharacterized protein LOC103451895 [Malus domestica]
ref\|XP_009115279.1\|	202	5	82.4										585	PREDICTED: uncharacterized protein LOC103840525 [Brassica rapa]
ref\|XP_006580845.1\|	212	5	82.4										868	PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
ref\|XP_008669041.1\|	235	5	80.9										704	PREDICTED: uncharacterized protein LOC103646095 [Zea mays]
ref\|XP_008356690.1\|	29	4	98.2										711	PREDICTED: uncharacterized protein LOC103420404 [Malus domestica]
ref\|XP_010430968.1\|	43	4	95.1										618	PREDICTED: uncharacterized protein LOC104715244 [Camelina sativa]
ref\|XP_008228903.1\|	196	4	83.2										1224	PREDICTED: uncharacterized protein LOC103328294 [Prunus mume]
ref\|XP_008337064.1\|	17	3	102										552	PREDICTED: uncharacterized protein LOC103400173 [Malus domestica]
ref\|XP_008671960.1\|	183	3	84.3										1477	PREDICTED: uncharacterized protein LOC103649473 [Zea mays]
ref\|XP_010051428.1\|	42	2	95.5										645	PREDICTED: uncharacterized protein LOC104440152 [Eucalyptus grandis]
ref\|XP_008356535.1\|	44	2	96.3										1312	PREDICTED: uncharacterized protein LOC103420252 [Malus domestica]
ref\|XP_008393388.1\|	54	2	94.4										700	PREDICTED: uncharacterized protein LOC103455582 [Malus domestica]
ref\|XP_008369089.1\|	85	2	91.3										1318	PREDICTED: uncharacterized protein LOC103432662 [Malus domestica]
ref\|XP_008350165.1\|	148	2	85.9										891	PREDICTED: uncharacterized protein LOC103413482 [Malus domestica]
ref\|XP_008385371.1\|	169	2	83.2										441	PREDICTED: uncharacterized protein LOC103447922 [Malus domestica]
ref\|XP_008386299.1\|	213	2	82.8										1255	PREDICTED: uncharacterized protein LOC103448812 [Malus domestica]
ref\|XP_008666385.1\|	239	2	80.9										1155	PREDICTED: uncharacterized protein LOC103645032 [Zea mays]
ref\|XP_010692480.1\|	245	2	80.5										1085	PREDICTED: uncharacterized protein LOC104905592 [Beta vulgaris subsp. vulgaris]
ref\|XP_008352890.1\|	26	1	99.0										700	PREDICTED: uncharacterized protein LOC103416421 [Malus domestica]
ref\|XP_008349844.1\|	75	1	90.1										438	PREDICTED: uncharacterized protein LOC103413131 [Malus domestica]
ref\|XP_008383301.1\|	107	1	89.7										970	PREDICTED: uncharacterized protein LOC103446021 [Malus domestica]
ref\|XP_011013508.1\|	125	1	85.5										329	PREDICTED: uncharacterized protein LOC105117521 [Populus euphratica] ref\|XP_011013509.1\| PREDICTED: uncharacterized prot
ref\|XP_008363328.1\|	195	1	83.2										837	PREDICTED: uncharacterized protein LOC103427031 [Malus domestica]
ref\|XP_009373186.1\|	219	1	82.0										973	PREDICTED: uncharacterized protein LOC103962231 [Pyrus x bretschneideri]
ref\|XP_004513130.1\|	32	0	97.8										752	PREDICTED: uncharacterized protein LOC101488260 [Cicer arietinum]
ref\|XP_008342970.1\|	36	0	97.4										887	PREDICTED: uncharacterized protein LOC103405720 [Malus domestica]
ref\|XP_008670020.1\|	189	0	83.2										792	PREDICTED: uncharacterized protein LOC103647230 [Zea mays]
ref\|XP_008375724.1\|	236	0	80.5										657	PREDICTED: uncharacterized protein LOC103438960 [Malus domestica]