Clone JMFN012A04 [sequences]

contigF:010401 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
ref|XP_009764287.1|194.02e-212-3943-136+2136PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Nicotiana sylvestris]
ref|XP_006349749.1|291.72e-202-3943-132+2132PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Solanum tuberosum]
ref|XP_004242350.1|390.15e-202-3944-128+2128PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Solanum lycopersicum]
ref|XP_004247215.1|489.78e-202-3943-132+2132PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Solanum lycopersicum]
gb|EYU46503.1|587.09e-192-3943-134+2134hypothetical protein MIMGU_mgv1a016095mg [Erythranthe guttata]
ref|XP_009612825.1|686.71e-18209-39475-136+2136PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Nicotiana tomentosiformis]
ref|XP_011079994.1|786.31e-182-3943-134+2134PREDICTED: photosystem II reaction center W protein, chloroplastic [Sesamum indicum]
ref|XP_010278154.1|886.33e-18197-39499-164+2164PREDICTED: photosystem II reaction center W protein, chloroplastic-like isoform X2 [Nelumbo nucifera]
ref|XP_010278153.1|1085.94e-18197-394104-169+2169PREDICTED: photosystem II reaction center W protein, chloroplastic-like isoform X1 [Nelumbo nucifera]
ref|XP_006352753.1|985.14e-18215-39473-132+2132PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Solanum tuberosum]
ref|XP_007144695.1|1183.22e-172-3943-134+2134hypothetical protein PHAVU_007G177300g [Phaseolus vulgaris] gb|ESW16689.1| hypothetical protein PHAVU_007G177300g [Phase
ref|XP_009367744.1|1282.83e-172-3943-132+2132PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Pyrus x bretschneideri]
ref|XP_010679171.1|1382.84e-17209-39475-135+2135PREDICTED: photosystem II reaction center W protein, chloroplastic [Beta vulgaris subsp. vulgaris]
gb|KDP21361.1|1782.87e-17191-394114-181+2181hypothetical protein JCGZ_21832 [Jatropha curcas]
ref|XP_007050413.1|1482.45e-17209-39475-135+2135Photosystem II reaction center W [Theobroma cacao] gb|EOX94570.1| Photosystem II reaction center W [Theobroma cacao]
ref|XP_006417879.1|1582.06e-17203-39465-128+2128hypothetical protein EUTSA_v10009104mg [Eutrema salsugineum] gb|ESQ36232.1| hypothetical protein EUTSA_v10009104mg [Eutr
ref|XP_009797611.1|1682.06e-17239-39483-134+2134PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Nicotiana sylvestris]
gb|KHF99710.1|1882.07e-17209-39470-131+2131Photosystem II reaction center W, chloroplastic [Gossypium arboreum]
ref|XP_004289903.1|1981.68e-17209-39475-136+2136PREDICTED: photosystem II reaction center W protein, chloroplastic [Fragaria vesca subsp. vesca]
gb|KJB25974.1|2081.69e-17209-39469-130+2130hypothetical protein B456_004G219000 [Gossypium raimondii]
ref|XP_006443912.1|2181.69e-17209-39475-135+2135hypothetical protein CICLE_v10024455mg [Citrus clementina] ref|XP_006479589.1| PREDICTED: photosystem II reaction center
gb|KJB42214.1|2281.69e-17209-39475-136+2136hypothetical protein B456_007G142300 [Gossypium raimondii]
gb|KHG11147.1|2381.61e-16209-39474-135+2135Photosystem II reaction center W, chloroplastic [Gossypium arboreum]
ref|XP_009597918.1|2581.61e-162-3943-134+2134PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Nicotiana tomentosiformis]
ref|NP_001235636.1|2481.31e-162-3943-132+2132uncharacterized protein LOC100306223 [Glycine max] gb|ACU14303.1| unknown [Glycine max] gb|KHN02535.1| Photosystem II re
ref|XP_004493748.1|2680.92e-16200-39474-138+2138PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Cicer arietinum]
gb|AFK47170.1|2780.92e-16200-39469-132+2132unknown [Lotus japonicus]
gb|KJB11157.1|2880.92e-16209-39469-129+2129hypothetical protein B456_001G243300 [Gossypium raimondii]
gb|AGU28450.1|2980.52e-16209-39473-133+2133photosystem II reaction center W (chloroplast) [Sinapis alba]
emb|CDY47132.1|3080.52e-16209-39473-133+2133BnaC04g13890D [Brassica napus]
ref|XP_009144290.1|3180.52e-16209-39473-133+2133PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Brassica rapa] emb|CDY10747.1| BnaA05g11890D [
sp|Q41387.1|PSBW_SPIOL3280.53e-16227-39482-137+2137RecName: Full=Photosystem II reaction center W protein, chloroplastic; AltName: Full=PSII 6.1 kDa protein; Flags: Precu
ref|XP_010557171.1|3380.13e-16209-39472-132+2132PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Tarenaya hassleriana]
ref|XP_002520988.1|3480.14e-162-3943-132+2132Photosystem II reaction center W protein, chloroplast precursor, putative [Ricinus communis] gb|EEF41405.1| Photosystem
ref|XP_007162497.1|3579.74e-16209-39472-132+2132hypothetical protein PHAVU_001G157100g [Phaseolus vulgaris] gb|ESW34491.1| hypothetical protein PHAVU_001G157100g [Phase
ref|XP_008382953.1|3679.74e-162-3943-132+2132PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Malus domestica]
gb|ACJ84151.1|3779.75e-16209-39475-136+2136unknown [Medicago truncatula] gb|KEH23858.1| photosystem II reaction center W [Medicago truncatula]
ref|XP_007162496.1|3879.75e-16209-39475-135+2135hypothetical protein PHAVU_001G157100g [Phaseolus vulgaris] gb|ESW34490.1| hypothetical protein PHAVU_001G157100g [Phase
gb|AFK35407.1|3979.76e-16209-39475-136+2136unknown [Medicago truncatula]
gb|KHG16614.1|4079.37e-16209-39469-129+2129Photosystem II reaction center W, chloroplastic [Gossypium arboreum]
ref|XP_008451280.1|4179.38e-16209-39478-138+2138PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Cucumis melo]
emb|CDY29661.1|4279.38e-16209-39473-133+2133BnaA04g17660D [Brassica napus]
ref|XP_006295756.1|4379.38e-16209-39473-133+2133hypothetical protein CARUB_v10024876mg [Capsella rubella] gb|EOA28654.1| hypothetical protein CARUB_v10024876mg [Capsell
gb|KFK42994.1|4479.08e-16203-39465-127+2127hypothetical protein AALP_AA1G065700 [Arabis alpina]
gb|ABL97943.1|4579.09e-16209-39473-133+2133component of 6.1 kDa polypeptide of photosystem II reaction center [Brassica rapa]
ref|XP_009141078.1|4679.09e-16209-39473-133+2133PREDICTED: photosystem II reaction center W protein, chloroplastic [Brassica rapa] emb|CDX97809.1| BnaC04g41300D [Brass
ref|XP_010274189.1|4779.01e-15209-39475-135+2135PREDICTED: photosystem II reaction center W protein, chloroplastic [Nelumbo nucifera]
ref|XP_006410160.1|4879.01e-15209-39473-133+2133hypothetical protein EUTSA_v10017409mg [Eutrema salsugineum] gb|ESQ51613.1| hypothetical protein EUTSA_v10017409mg [Eutr
ref|XP_010414250.1|4978.61e-15209-39474-134+2134PREDICTED: photosystem II reaction center W protein, chloroplastic [Camelina sativa] ref|XP_010469839.1| PREDICTED: pho
ref|XP_010911721.1|5078.61e-152-3943-131+2131PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Elaeis guineensis]
ref|XP_006383688.1|5178.61e-15191-39465-131+2131hypothetical protein POPTR_0005s24030g [Populus trichocarpa] gb|ERP61485.1| hypothetical protein POPTR_0005s24030g [Popu
ref|XP_010510340.1|5278.61e-15209-39474-134+2134PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Camelina sativa]
ref|XP_002282059.1|5378.61e-15209-39475-135+2135PREDICTED: photosystem II reaction center W protein, chloroplastic [Vitis vinifera] emb|CBI17944.3| unnamed protein pro
ref|XP_002300801.2|5478.61e-15200-39470-133+2133hypothetical protein POPTR_0002s04520g [Populus trichocarpa] gb|ABK96462.1| unknown [Populus trichocarpa x Populus delto
ref|XP_011042419.1|5578.61e-15191-39468-134+2134PREDICTED: photosystem II reaction center W protein, chloroplastic isoform X2 [Populus euphratica]
ref|XP_002307627.1|5678.62e-15191-39468-134+2134hypothetical protein POPTR_0005s24030g [Populus trichocarpa] gb|ABK94852.1| unknown [Populus trichocarpa] gb|EEE94623.1|
ref|XP_002531284.1|5778.22e-15227-39479-134+2134Photosystem II reaction center W protein, chloroplast precursor, putative [Ricinus communis] gb|EEF31097.1| Photosystem
ref|XP_010522023.1|5878.22e-15209-39475-135+2135PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Tarenaya hassleriana]
ref|XP_002881119.1|5978.22e-15209-39473-133+2133hypothetical protein ARALYDRAFT_902045 [Arabidopsis lyrata subsp. lyrata] gb|EFH57378.1| hypothetical protein ARALYDRAF
gb|KHN32325.1|6077.82e-15200-39460-123+2123Photosystem II reaction center W protein, chloroplastic [Glycine soja]
ref|NP_180615.1|6177.82e-15209-39473-133+2133photosystem II reaction center W protein [Arabidopsis thaliana] sp|Q39194.2|PSBW_ARATH RecName: Full=Photosystem II reac
ref|XP_004146953.1|6377.83e-15209-39477-137+2137PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Cucumis sativus] ref|XP_004165638.1| PREDICTED
ref|XP_010038859.1|6477.83e-15209-39475-135+2135PREDICTED: photosystem II reaction center W protein, chloroplastic [Eucalyptus grandis]
gb|KCW84675.1|7077.86e-15209-394126-186+2186hypothetical protein EUGRSUZ_B01493 [Eucalyptus grandis]
ref|XP_009119030.1|6277.43e-15203-39468-131+2131PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Brassica rapa]
ref|NP_001236684.1|6577.43e-15227-39481-136+2136uncharacterized protein LOC100305788 [Glycine max] gb|ACU13646.1| unknown [Glycine max] gb|KHN03842.1| Photosystem II re
ref|XP_011042418.1|6677.43e-15191-39471-137+2137PREDICTED: photosystem II reaction center W protein, chloroplastic isoform X1 [Populus euphratica]
emb|CDY54877.1|6777.44e-15203-39468-131+2131BnaA10g27910D [Brassica napus]
ref|XP_004165637.1|6877.45e-15209-39485-145+2145PREDICTED: photosystem II reaction center W protein, chloroplastic-like isoform 1 [Cucumis sativus]
gb|AFK39129.1|6977.05e-15239-39485-136+2136unknown [Lotus japonicus] gb|AFK43660.1| unknown [Lotus japonicus]
ref|XP_008372312.1|7176.68e-15227-39477-132+2132PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Malus domestica] ref|XP_009354885.1| PREDICTED
ref|XP_006487787.1|7276.68e-15227-39482-137+2137PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Citrus sinensis]
emb|CAA62296.1|7376.39e-15209-39473-133+2133component of 6.1 kDa polypeptide of photosystem II reaction center [Arabidopsis thaliana]
emb|CDP03696.1|7476.39e-15209-39474-134+2134unnamed protein product [Coffea canephora]
ref|XP_011082608.1|7576.31e-142-3944-136+2136PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Sesamum indicum]
ref|NP_001236601.1|7676.31e-14227-39478-133+2133uncharacterized protein LOC100526966 [Glycine max] gb|ACU16001.1| unknown [Glycine max] gb|KHN10708.1| Photosystem II re
gb|AFK35192.1|7776.31e-14233-39484-137+2137unknown [Medicago truncatula]
gb|KEH42615.1|7875.91e-14233-39484-137+2137photosystem II reaction center W [Medicago truncatula]
ref|XP_008456049.1|7975.91e-14239-39482-133+2133PREDICTED: photosystem II reaction center W protein, chloroplastic-like isoform X1 [Cucumis melo]
ref|XP_006424011.1|8075.92e-14227-39482-137+2137hypothetical protein CICLE_v10029551mg [Citrus clementina] gb|ESR37251.1| hypothetical protein CICLE_v10029551mg [Citrus
ref|XP_006576193.1|8175.52e-14227-39468-123+2123PREDICTED: uncharacterized protein LOC100526966 isoform X1 [Glycine max]
ref|XP_007030550.1|8275.52e-14227-39480-135+2135Photosystem II reaction center W protein, chloroplastic, putative [Theobroma cacao] gb|EOY11052.1| Photosystem II react
ref|XP_004495141.1|8475.52e-14233-39485-138+2138PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Cicer arietinum]
ref|XP_007200389.1|9075.54e-14227-394110-165+2165hypothetical protein PRUPE_ppa012535mg [Prunus persica] gb|EMJ01588.1| hypothetical protein PRUPE_ppa012535mg [Prunus pe
ref|XP_008456055.1|8375.12e-14239-39467-118+2118PREDICTED: photosystem II reaction center W protein, chloroplastic-like isoform X2 [Cucumis melo]
ref|XP_008235323.1|8575.12e-14227-39478-133+2133PREDICTED: photosystem II reaction center W protein, chloroplastic [Prunus mume]
ref|XP_008786095.1|8675.12e-14185-39463-132+2132PREDICTED: photosystem II reaction center W protein, chloroplastic [Phoenix dactylifera]
gb|KDP23672.1|8775.13e-14227-39477-132+2132hypothetical protein JCGZ_23505 [Jatropha curcas]
ref|XP_002264508.1|8875.13e-14227-39480-135+2135PREDICTED: photosystem II reaction center W protein, chloroplastic [Vitis vinifera] emb|CBI35208.3| unnamed protein pro
ref|XP_011026046.1|9174.74e-14200-39470-133+2133PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Populus euphratica]
ref|XP_004235188.2|8974.33e-14218-37674-126+2391PREDICTED: peptide methionine sulfoxide reductase A1 [Solanum lycopersicum]
ref|NP_001236406.1|9274.35e-14227-39478-133+2133uncharacterized protein LOC100499815 [Glycine max] gb|ACU13771.1| unknown [Glycine max]
ref|XP_010087137.1|9374.35e-14233-39483-136+2136Photosystem II reaction center W protein [Morus notabilis] gb|EXB26577.1| Photosystem II reaction center W protein [Moru
gb|KHG12515.1|9573.96e-14233-39482-135+2135Photosystem II reaction center W, chloroplastic [Gossypium arboreum]
emb|CAN68593.1|9472.86e-14227-39415-70+270hypothetical protein VITISV_016961 [Vitis vinifera]
gb|EPS67896.1|9772.82e-13239-39485-136+2136hypothetical protein M569_06880 [Genlisea aurea]
gb|AAL32042.1|AF439283_19672.02e-13209-39436-96+296photosystem II reaction center [Retama raetam]
ref|XP_006838860.1|9872.03e-13194-39463-128+2128hypothetical protein AMTR_s00002p00266120 [Amborella trichopoda] gb|ERN01429.1| hypothetical protein AMTR_s00002p0026612
ref|XP_010937454.1|9972.03e-13194-39464-131+2131PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Elaeis guineensis]
emb|CDY10227.1|10072.04e-13233-39478-131+2131BnaC05g04700D [Brassica napus]
gb|ADB85767.1|10170.99e-13206-39466-127+2127chloroplast photosystem II reaction center W-like protein [Wolffia arrhiza]
gb|AEJ88280.1|10270.51e-12206-39471-132+2132putative chloroplast photosystem II reaction center W-like protein [Wolffia australiana] gb|AEY84993.1| photosystem II
ref|XP_009407745.1|10370.52e-12191-39488-155+2155PREDICTED: LOW QUALITY PROTEIN: photosystem II reaction center W protein, chloroplastic-like [Musa acuminata subsp. mal
gb|AEI83508.1|10469.73e-12206-39466-127+2127chloroplast photosystem II reaction center W-like protein [Wolffia arrhiza]
ref|XP_009398570.1|10569.33e-12191-39461-127+2127PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Musa acuminata subsp. malaccensis]
ref|XP_004139238.1|10669.34e-12239-39483-134+2134PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Cucumis sativus] ref|XP_004156466.1| PREDICTED
ref|XP_008349078.1|10760.81e-09227-3947-62+262PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Malus domestica]
gb|ABK21433.1|10859.32e-08233-39493-146+2146unknown [Picea sitchensis] gb|ABK26137.1| unknown [Picea sitchensis] gb|ABK26178.1| unknown [Picea sitchensis] gb|ABR161
ref|NP_001150205.1|10957.46e-08194-39462-127+2127LOC100283835 [Zea mays] gb|ACG38246.1| photosystem II reaction center W protein [Zea mays]
gb|ABK21312.1|11057.08e-08233-39493-146+2146unknown [Picea sitchensis] gb|ABK21398.1| unknown [Picea sitchensis] gb|ABK25626.1| unknown [Picea sitchensis] gb|ABK260
gb|ACN40147.1|11157.09e-08233-39496-149+2149unknown [Picea sitchensis] gb|ACN40418.1| unknown [Picea sitchensis]
gb|KIZ07373.1|11255.13e-07215-39454-114+2114Photosystem II reaction center W protein [Monoraphidium neglectum]
ref|XP_004961567.1|11555.18e-07194-385138-200+2204PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Setaria italica]
ref|XP_002458578.1|11354.36e-07227-39471-126+2126hypothetical protein SORBIDRAFT_03g036090 [Sorghum bicolor] gb|EES03698.1| hypothetical protein SORBIDRAFT_03g036090 [So
ref|XP_001764829.1|11653.51e-06191-39475-142+2142predicted protein [Physcomitrella patens] gb|EDQ70271.1| predicted protein, partial [Physcomitrella patens]
ref|XP_002440047.1|11453.18e-07215-3945-63+263hypothetical protein SORBIDRAFT_09g025010 [Sorghum bicolor] gb|EES18477.1| hypothetical protein SORBIDRAFT_09g025010 [So
emb|CDM84178.1|11753.12e-06227-38575-127+2131unnamed protein product [Triticum aestivum] emb|CDM84424.1| unnamed protein product [Triticum aestivum]
gb|KIY99469.1|11852.82e-06227-39456-113+2113Photosystem II reaction center W protein [Monoraphidium neglectum]
ref|XP_003569933.1|11952.83e-06227-38575-127+2131PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Brachypodium distachyon]
dbj|BAJ92812.1|12052.44e-06227-38572-124+2128predicted protein [Hordeum vulgare subsp. vulgare] dbj|BAK00494.1| predicted protein [Hordeum vulgare subsp. vulgare]
ref|XP_004970145.1|12152.04e-06218-38572-126+2130PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Setaria italica]
gb|ACG26085.1|12451.66e-06227-38574-126+2130photosystem II reaction center W protein [Zea mays]
ref|NP_001150186.1|12551.67e-06227-38571-123+2127LOC100283816 [Zea mays] gb|ACG38170.1| photosystem II reaction center W protein [Zea mays]
gb|AAG59875.1|12251.24e-06188-3941-69+269PSII subunit PsbW, partial [Physcomitrella patens]
gb|ACF85777.1|12651.27e-06227-38571-123+2127unknown [Zea mays] gb|ACF88273.1| unknown [Zea mays] gb|ACG30614.1| photosystem II reaction center W protein [Zea mays]
gb|ACG31447.1|12851.29e-06227-38575-127+2131photosystem II reaction center W protein [Zea mays]
ref|XP_001775035.1|12350.85e-06194-3941-67+267predicted protein [Physcomitrella patens] gb|EDQ60142.1| predicted protein, partial [Physcomitrella patens]
ref|XP_001764886.1|12948.93e-05206-3942-64+264predicted protein [Physcomitrella patens] gb|EDQ70328.1| predicted protein [Physcomitrella patens]
ref|XP_003568151.1|13048.95e-05197-38557-118+2122PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Brachypodium distachyon]
gb|AAL16242.1|AF428312_113148.56e-05209-31673-107+2112At2g30570/T6B20.8 [Arabidopsis thaliana]
ref|NP_001044402.1|13247.42e-04239-38572-120+2124Os01g0773700 [Oryza sativa Japonica Group] sp|Q5ZBY9.1|PSBW_ORYSJ RecName: Full=Photosystem II reaction center W protein
ref|XP_006644788.1|13347.42e-04239-38576-124+2128PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Oryza brachyantha]
gb|EMS64749.1|13547.42e-04227-38598-150+2154Photosystem II reaction center W protein, chloroplastic [Triticum urartu]
dbj|BAK02834.1|13646.23e-04218-38540-94+298predicted protein [Hordeum vulgare subsp. vulgare]
gb|EEE55467.1|13746.23e-04239-38555-103+2107hypothetical protein OsJ_03635 [Oryza sativa Japonica Group]
ref|XP_001702016.1|13846.24e-04115photosystem II reaction center W protein [Chlamydomonas reinhardtii] sp|Q9SPI9.1|PSBW_CHLRE RecName: Full=Photosystem II
gb|AGE93844.1|127n51.2104chloroplast photosystem II reaction center W protein, partial [Posidonia oceanica]
ref|XP_002955022.1|134r47.0115photosystem II subunit W, chloroplast precursor [Volvox carteri f. nagariensis] gb|EFJ44010.1| photosystem II subunit W