Clone JMFN005H17 [sequences]

contigF:008429 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
ref|NP_001065797.2|179.32e-138-394692-825+21601Os11g0157000 [Oryza sativa Japonica Group] dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
gb|AAT85194.1|279.02e-138-376601-728+21241putative polyprotein [Oryza sativa Japonica Group]
gb|ABA99474.1|379.03e-138-388434-565+2983retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
gb|AAX92941.1|479.03e-138-388899-1030+22340retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gb|ABA91548.1| retrotransposon pro
gb|AAP53216.2|777.41e-128-376690-817+21262retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
gb|ABA93547.1|577.07e-138-376301-428+2546retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
gb|ABD32732.1|677.07e-132-29282-198+2624hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
gb|AAM08562.1|AC092749_15877.01e-128-376653-780+21225Putative retroelement [Oryza sativa Japonica Group] gb|AAM10749.1|AC112514_2 Putative retroelement [Oryza sativa Japonic
gb|AAM91886.1|976.62e-128-388727-858+21280putative polyprotein [Oryza sativa Japonica Group]
gb|AAP54315.2|1076.62e-128-388727-858+21312retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
gb|AAT44282.1|1175.53e-128-388664-795+21243putative polyprotein [Oryza sativa Japonica Group]
emb|CAH65740.1|1274.76e-128-388513-644+21009OSIGBa0127D24.3 [Oryza sativa Indica Group]
emb|CAN65222.1|1374.38e-128-427791-934+21562hypothetical protein VITISV_038665 [Vitis vinifera]
gb|AAT44257.1|1472.83e-118-388571-702+21211putative polyprotein [Oryza sativa Japonica Group]
emb|CAI44659.1|1572.43e-118-388474-605+21007OSJNBa0061C06.9 [Oryza sativa Japonica Group]
gb|ABO36622.1|1771.66e-118-388670-798+21307copia LTR rider [Solanum lycopersicum] gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
emb|CDN96898.1|1970.99e-118-376617-739+2813putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
gb|AER13159.1|2070.12e-108-388671-797+2867putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
gb|AAX96781.1|2170.12e-108-358727-846+21170retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gb|ABA92543.1| retrotransposon pro
emb|CAH66022.1|2268.94e-108-388520-616+2944OSIGBa0105O19.1 [Oryza sativa Indica Group]
emb|CAD40363.2|2368.94e-108-388520-616+2944OSJNBa0093P23.9 [Oryza sativa Japonica Group]
emb|CAN66775.1|2467.02e-098-415288-430+2734hypothetical protein VITISV_035302 [Vitis vinifera]
emb|CAN79540.1|2566.62e-098-364266-379+2699hypothetical protein VITISV_016973 [Vitis vinifera]
gb|ABA91380.1|2666.23e-098-388561-658+21138retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
emb|CAN76611.1|2764.37e-098-33787-188+2473hypothetical protein VITISV_040103 [Vitis vinifera]
gb|ABA97637.1|2958.21e-068-388685-813+21278retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
gb|ABA99467.1|3057.82e-068-388477-605+21136retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
gb|AAT01387.1|3355.11e-058-388580-708+21175putative polyprotein [Oryza sativa Japonica Group] gb|AAT44170.1| putative polyprotein [Oryza sativa Japonica Group]
emb|CAJ09951.2|3454.71e-058-388682-821+21334putative gag-pol polyprotein [Citrus sinensis]
gb|ABA98804.1|3554.71e-058-388684-824+21333retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
gb|AAR87163.1|3654.72e-058-388685-813+21322putative polyprotein [Oryza sativa Japonica Group] gb|AAU89150.1| integrase core domain containing protein [Oryza sativa
gb|ABA96191.1|3754.32e-058-388625-753+21156retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
gb|ABA98656.1|3854.32e-058-388684-824+21333retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
emb|CAN80490.1|3953.53e-058-400362-513+2777hypothetical protein VITISV_004703 [Vitis vinifera]
gb|AAX92861.1|4053.54e-058-388684-824+21373retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gb|ABA92739.1| retrotransposon pro
emb|CAN61630.1|4153.54e-058-388650-778+21208hypothetical protein VITISV_003191 [Vitis vinifera]
emb|CAH66122.1|4253.15e-058-388686-826+21335OSIGBa0146N20.7 [Oryza sativa Indica Group]
gb|ABA97036.1|4352.48e-058-388524-651+2966retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
gb|ABA93686.1|4452.01e-048-388349-477+2680retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
emb|CAN61272.1|4552.01e-048-4271004-1147+21643hypothetical protein VITISV_039063 [Vitis vinifera]
emb|CAN68837.1|4651.62e-048-29580-174+2445hypothetical protein VITISV_035956 [Vitis vinifera]
gb|AAL31093.1|AC091749_224750.84e-048-388643-771+21229putative retrotransposon-related protein [Oryza sativa Japonica Group] gb|AAN04164.1| Putative retrotransposon protein
gb|ACS74199.1|4850.44e-048-376656-785+21297putative gag-pol polyprotein [Fragaria x ananassa]
gb|AAX95987.1|4949.39e-04671retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] gb|ABA92387.1| retrotransposon protein, p
ref|XP_010676254.1|28959.71947PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp. vulgaris]
ref|XP_006651032.1|16672.41773PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
ref|XP_010692517.1|18471.62676PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp. vulgaris]
ref|XP_008810106.1|32455.1645PREDICTED: uncharacterized protein LOC103721614 [Phoenix dactylifera]
ref|XP_008392199.1|31153.1132PREDICTED: uncharacterized protein LOC103454381 [Malus domestica]